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r-jskm 0.5.21
Propagated dependencies: r-survival@3.8-3 r-survey@4.4-2 r-scales@1.4.0 r-patchwork@1.3.0 r-ggsci@3.2.0 r-ggpubr@0.6.0 r-ggplot2@3.5.2 r-cmprsk@2.2-12
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/jinseob2kim/jskm
Licenses: ASL 2.0
Synopsis: Kaplan-Meier Plot with 'ggplot2'
Description:

The function jskm() creates publication quality Kaplan-Meier plot with at risk tables below. svyjskm() provides plot for weighted Kaplan-Meier estimator.

r-lwqs 0.5.0
Propagated dependencies: r-plyr@1.8.9 r-gwqs@3.0.5 r-gridextra@2.3 r-ggplot2@3.5.2 r-gamm4@0.2-7 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lwqs
Licenses: GPL 2+
Synopsis: Lagged Weighted Quantile Sum Regression
Description:

Wrapper functions for the implementation of lagged weighted quantile sum regression, as per Gennings et al (2020) <doi:10.1016/j.envres.2020.109529>.

r-mort 0.0.1
Propagated dependencies: r-rlang@1.1.6 r-lubridate@1.9.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/rosieluain/mort
Licenses: GPL 3+
Synopsis: Identifying Potential Mortalities and Expelled Tags in Aquatic Acoustic Telemetry Arrays
Description:

This package provides a toolkit for identifying potential mortalities and expelled tags in aquatic acoustic telemetry arrays. Designed for arrays with non-overlapping receivers.

r-mkde 0.4
Propagated dependencies: r-terra@1.8-50 r-stars@0.6-8 r-sf@1.0-21 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mkde
Licenses: GPL 3+
Synopsis: 2D and 3D Movement-Based Kernel Density Estimates (MKDEs)
Description:

This package provides functions to compute and visualize movement-based kernel density estimates (MKDEs) for animal utilization distributions in 2 or 3 spatial dimensions.

r-nser 1.5.6
Propagated dependencies: r-xml2@1.3.8 r-stringr@1.5.1 r-rvest@1.0.4 r-reticulate@1.42.0 r-readr@2.1.5 r-purrr@1.0.4 r-magrittr@2.0.3 r-lubridate@1.9.4 r-httr@1.4.7 r-googlevis@0.7.3 r-dplyr@1.1.4 r-curl@6.2.3
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://github.com/nandp1/nser/
Licenses: GPL 3
Synopsis: Bhavcopy and Live Market Data from National Stock Exchange (NSE) & Bombay Stock Exchange (BSE) India
Description:

Download Current & Historical Bhavcopy. Get Live Market data from NSE India of Equities and Derivatives (F&O) segment. Data source <https://www.nseindia.com/>.

r-oaii 0.5.0
Propagated dependencies: r-magrittr@2.0.3 r-httr@1.4.7 r-checkmate@2.3.2 r-base64enc@0.1-3
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://github.com/cezarykuran/oaii
Licenses: Expat
Synopsis: 'OpenAI' API R Interface
Description:

This package provides a comprehensive set of helpers that streamline data transmission and processing, making it effortless to interact with the OpenAI API.

r-ottr 1.5.3
Propagated dependencies: r-zip@2.3.3 r-testthat@3.2.3 r-r6@2.6.1 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=ottr
Licenses: Modified BSD
Synopsis: An R Autograding Extension for Otter-Grader
Description:

An R autograding extension for Otter-Grader (<https://otter-grader.readthedocs.io>). It supports grading R scripts, R Markdown documents, and R Jupyter Notebooks.

r-pwt8 8.1-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pwt8
Licenses: GPL 2 GPL 3
Synopsis: Penn World Table (Version 8.x)
Description:

The Penn World Table 8.x provides information on relative levels of income, output, inputs, and productivity for 167 countries between 1950 and 2011.

r-pare 0.1.15
Propagated dependencies: r-stringr@1.5.1 r-rsvg@2.6.2 r-rmarkdown@2.29 r-r6@2.6.1 r-pak@0.9.0 r-magrittr@2.0.3 r-lintr@3.2.0 r-igraph@2.1.4 r-glue@1.8.0 r-git2r@0.36.2 r-dplyr@1.1.4 r-diagrammersvg@0.1 r-diagrammer@1.0.11 r-desc@1.4.3 r-cyclocomp@1.1.1 r-cli@3.6.5 r-checkmate@2.3.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/darwin-eu-dev/PaRe
Licenses: FSDG-compatible
Synopsis: Way to Perform Code Review or QA on Other Packages
Description:

Reviews other packages during code review by looking at their dependencies, code style, code complexity, and how internally defined functions interact with one another.

r-pecv 1.0.1
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14 r-irlba@2.3.5.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/wangATsu/ECV
Licenses: GPL 3
Synopsis: Entrywise Splitting Cross-Validation for Factor Models
Description:

This package implements entrywise splitting cross-validation (ECV) and its penalized variant (pECV) for selecting the number of factors in generalized factor models.

r-plfm 2.2.6
Propagated dependencies: r-sfsmisc@1.1-20 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=plfm
Licenses: GPL 2+
Synopsis: Probabilistic Latent Feature Analysis
Description:

This package provides functions for estimating probabilistic latent feature models with a disjunctive, conjunctive or additive mapping rule on (aggregated) binary three-way data.

r-spei 1.8.1
Propagated dependencies: r-zoo@1.8-14 r-tlmoments@0.7.5.3 r-reshape@0.8.9 r-lubridate@1.9.4 r-lmomco@2.5.3 r-lmom@3.2 r-ggplot2@3.5.2 r-checkmate@2.3.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://spei.csic.es
Licenses: GPL 2
Synopsis: Calculation of the Standardized Precipitation-Evapotranspiration Index
Description:

This package provides a set of functions for computing potential evapotranspiration and several widely used drought indices including the Standardized Precipitation-Evapotranspiration Index (SPEI).

r-tgml 0.2.0
Propagated dependencies: r-randomforest@4.7-1.2 r-proc@1.18.5 r-glmnet@4.1-8 r-e1071@1.7-16
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tgml
Licenses: GPL 2+
Synopsis: Tree Guided Machine Learning for Personalized Prediction and Precision Diagnostics
Description:

Generalization of the classification and regression tree (CART) model that partitions subjects into terminal nodes and tailors machine learning model to each terminal node.

r-voss 0.1.5
Propagated dependencies: r-fields@16.3.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=Voss
Licenses: GPL 3
Synopsis: Generic Voss Algorithm (Random Sequential Additions)
Description:

Generating realizations of a fractal Brownian function on uniform 1D & 2D grid with classic and generic versions of the Voss algorithm (random sequential additions).

r-xmrr 1.1.1
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-rlang@1.1.6 r-qpdf@1.3.5 r-purrr@1.0.4 r-ggplot2@3.5.2 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/x.scm (guix-cran packages x)
Home page: https://cran.r-project.org/package=xmrr
Licenses: GPL 3
Synopsis: Generate XMR Control Chart Data from Time-Series Data
Description:

XMRs combine X-Bar control charts and Moving Range control charts. These functions also will recalculate the reference lines when significant change has occurred.

r-mpfe 1.44.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MPFE
Licenses: GPL 3+
Synopsis: Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data
Description:

Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.

r-moma 1.20.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rlang@1.1.6 r-reshape2@1.4.4 r-readr@2.1.5 r-rcolorbrewer@1.1-3 r-qvalue@2.40.0 r-multiassayexperiment@1.34.0 r-mkmisc@1.9 r-magrittr@2.0.3 r-ggplot2@3.5.2 r-dplyr@1.1.4 r-complexheatmap@2.24.0 r-cluster@2.1.8.1 r-circlize@0.4.16
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MOMA
Licenses: GPL 3
Synopsis: Multi Omic Master Regulator Analysis
Description:

This package implements the inference of candidate master regulator proteins from multi-omics data (MOMA) algorithm, as well as ancillary analysis and visualization functions.

r-xcir 1.8.0-1.3b59d45
Propagated dependencies: r-biomart@2.64.0 r-biostrings@2.76.0 r-data-table@1.17.4 r-ggplot2@3.5.2 r-iranges@2.42.0 r-readxl@1.4.5 r-s4vectors@0.46.0 r-seqminer@9.7 r-variantannotation@1.54.1
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/SRenan/XCIR
Licenses: GPL 2
Synopsis: Analysis of X chromosome inactivation
Description:

This package is an R package that offers models and tools for subject level analysis of X chromosome inactivation (XCI) and XCI-escape inference.

r-coin 1.4-3
Propagated dependencies: r-libcoin@1.0-10 r-matrixstats@1.5.0 r-modeltools@0.2-24 r-multcomp@1.4-28 r-mvtnorm@1.3-3 r-survival@3.8-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://coin.r-forge.r-project.org
Licenses: GPL 2
Synopsis: Conditional inference procedures in a permutation test framework
Description:

This package provides conditional inference procedures for the general independence problem including two-sample, K-sample (non-parametric ANOVA), correlation, censored, ordered and multivariate problems.

raider 1.3.1
Dependencies: libadwaita@1.6.0 gtk@4.16.13
Channel: guix
Location: gnu/packages/gnome.scm (gnu packages gnome)
Home page: https://github.com/ADBeveridge/raider
Licenses: GPL 3+
Synopsis: Securely delete your files
Description:

Raider is a simple shredding program built for GNOME. Also known as File Shredder, it uses the GNU Core Utility called shred to securely delete files.

roffit 0.12-1.b59e6c855
Dependencies: bash-minimal@5.1.16 perl@5.36.0
Channel: guix
Location: gnu/packages/groff.scm (gnu packages groff)
Home page: https://daniel.haxx.se/projects/roffit/
Licenses: Expat
Synopsis: Convert nroff files to HTML
Description:

Roffit is a program that reads an nroff file and outputs an HTML file. It is typically used to display man pages on a web site.

r-rstg 0.0.1
Propagated dependencies: r-reticulate@1.42.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=Rstg
Licenses: Expat
Synopsis: STG : Feature Selection using STochastic Gates
Description:

STG is a method for feature selection in neural network. The procedure is based on probabilistic relaxation of the l0 norm of features, or the count of the number of selected features. The framework simultaneously learns either a nonlinear regression or classification function while selecting a small subset of features. Read more: Yamada et al. (2020) <https://proceedings.mlr.press/v119/yamada20a.html>.

r-rres 1.1
Propagated dependencies: r-rcpp@1.0.14 r-kernlab@0.9-33
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rres
Licenses: GPL 2+
Synopsis: Realized Relatedness Estimation and Simulation
Description:

This package provides functions for studying realized genetic relatedness between people. Users will be able to simulate inheritance patterns given pedigree structures, generate SNP marker data given inheritance patterns, and estimate realized relatedness between pairs of individuals using SNP marker data. See Wang (2017) <doi:10.1534/genetics.116.197004>. This work was supported by National Institutes of Health grants R37 GM-046255.

r-rkin 1.0.4
Propagated dependencies: r-shades@1.4.0 r-sf@1.0-21 r-rcolorbrewer@1.1-3 r-randomcolor@1.1.0.1 r-mass@7.3-65 r-ks@1.15.1 r-ggplot2@3.5.2 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/salbeke/rKIN
Licenses: GPL 3+
Synopsis: (Kernel) Isotope Niche Estimation
Description:

Applies methods used to estimate animal homerange, but instead of geospatial coordinates, we use isotopic coordinates. The estimation methods include: 1) 2-dimensional bivariate normal kernel utilization density estimator, 2) bivariate normal ellipse estimator, and 3) minimum convex polygon estimator, all applied to stable isotope data. Additionally, functions to determine niche area, polygon overlap between groups and levels (confidence contours) and plotting capabilities.

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