This package provides support for building Feldman-Cousins confidence intervals [G. J. Feldman and R. D. Cousins (1998) <doi:10.1103/PhysRevD.57.3873>].

Offers functions for the comparison of Gutenberg-Richter b-values. Several functions in GRTo are helpful for the assessment of the quality of seismicity catalogs.

These are two-sample tests for categorical data utilizing similarity information among the categories. They are useful when there is underlying structure on the categories.

Geostatistical analysis including variogram-based, likelihood-based and Bayesian methods. Software companion for Diggle and Ribeiro (2007) <doi:10.1007/978-0-387-48536-2>.

An algorithm for time series analysis that leverages hidden Markov models, cluster analysis, and mixture distributions to segment data, detect patterns and predict future sequences.

This package provides functions to access data from the US Department of Housing and Urban Development <https://www.huduser.gov/portal/dataset/fmr-api.html>.

The ISA is a biclustering algorithm that finds modules in an input matrix. A module or bicluster is a block of the reordered input matrix.

Likelihood inference under covariate assumptions (LUCA) in case-control studies of a rare disease assuming independence or simple dependence of genetic and non-genetic covariates.

Estimate the slope and intercept of a bivariate linear relationship by calculating a posterior density that is invariant to interchange and scaling of the coordinates.

This package provides a function for measuring the difference between two independent or non-independent empirical distributions and returning a significance level of the difference.

This package implements the methods described in Bond S, Farewell V, 2006, Exact Likelihood Estimation for a Negative Binomial Regression Model with Missing Outcomes, Biometrics.

Includes functions and examples to compute NEAT, the Network Enrichment Analysis Test described in Signorelli et al. (2016, <DOI:10.1186/s12859-016-1203-6>).

Extends flexclust with an R implementation of order constrained solutions in k-means clustering (Steinley and Hubert, 2008, <doi:10.1007/s11336-008-9058-z>).

This package provides a semi-parametric estimation method for the Cox model with left-truncated data using augmented information from the marginal of truncation times.

Implementation of the pattern recognition technique Principal Component Pursuit tailored to environmental health data, as described in Gibson et al (2022) <doi:10.1289/EHP10479>.

Finds equivalence classes corresponding to a symmetric relation or undirected graph. Finds total order consistent with partial order or directed graph (so-called topological sort).

This package provides a toolkit implementing the Matrix Profile concept that was created by CS-UCR <http://www.cs.ucr.edu/~eamonn/MatrixProfile.html>.

Trauma Mortality prediction for ICD-9, ICD-10, and AIS lexicons in long or wide format based on Dr. Alan Cook's tmpm mortality model.

Suite of tools to support the practice of tada science. It includes an engaging package roulette that is designed to facilitate learning about new packages.

This package performs Wilcoxon-Mann-Whitney test in the presence of missing data with controlled Type I error regardless of the values of missing data.

This package is an R package that offers models and tools for subject level analysis of X chromosome inactivation (XCI) and XCI-escape inference.

This package provides conditional inference procedures for the general independence problem including two-sample, K-sample (non-parametric ANOVA), correlation, censored, ordered and multivariate problems.

Raider is a simple shredding program built for GNOME. Also known as File Shredder, it uses the GNU Core Utility called shred to securely delete files.

Roffit is a program that reads an nroff file and outputs an HTML file. It is typically used to display man pages on a web site.