This package provides tools, helpers and data structures for developing models and time series functions for fable and extension packages. These tools support a consistent and tidy interface for time series modelling and analysis.
This package provides a game for two players: Who gets first four in a row (horizontal, vertical or diagonal) wins. As board game published by Milton Bradley, designed by Howard Wexler and Ned Strongin.
An implementation of the Otsu's Image Segmentation Method described in the paper: "A C++ Implementation of Otsu's Image Segmentation Method". The algorithm is explained at <doi:10.5201/ipol.2016.158>.
Estimation and bootstrap utilities for single layer and multilayer Mixed Graphical Models, including functions for centrality, bridge metrics, membership stability, and plotting (De Martino et al. (2026) <doi:10.48550/arXiv.2602.05716>).
This package provides a simple and trustworthy methodology for the analysis of misreported continuous time series. See Moriña, D, Fernández-Fontelo, A, Cabaña, A, Puig P. (2021) <arXiv:2003.09202v2>.
Sends queries to a specified Neo4J graph database, capturing results in a dataframe where appropriate. Other useful functions for the importing and management of data on the Neo4J server and basic local server admin.
Efficiency and productivity indices are measured using this package. This package contains functions for measuring efficiency and productivity of decision making units (DMUs) under the framework of Data Envelopment Analysis (DEA) and its variations.
Estimation of value and hedging strategy of call and put options, based on optimal hedging and Monte Carlo method, from Chapter 3 of Statistical Methods for Financial Engineering', by Bruno Remillard, CRC Press, (2013).
Summarises key information in data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Assess suitability to perform specific epidemiological studies and explore the different domains to obtain feasibility counts and trends.
This package provides functions to plot QTL (quantitative trait loci) analysis results and related diagnostics. Part of qtl2', an upgrade of the qtl package to better handle high-dimensional data and complex cross designs.
This package provides a tool that can be customized to aid in the clean up of ecological data collected using quadrats and can crop quadrats to ensure comparability between quadrats collected under different methodologies.
Estimation of model parameters for marked Hawkes process. Accounts for missing data in the estimation of the parameters. Technical details found in (Tucker et al., 2019 <DOI:10.1016/j.spasta.2018.12.004>).
This package provides a tidy approach to spatial network analysis, in the form of classes and functions that enable a seamless interaction between the network analysis package tidygraph and the spatial analysis package sf'.
This package provides data about the Star Wars movie franchise in a set of relational tables or as a complete DuckDB database. All data was collected from the open source Star Wars API.
Seamless and standardized interaction with data exported from the clinical data management system (CDMS) secuTrial'<https://www.secutrial.com>. The primary data export the package works with is a standard non-rectangular export.
Trust region algorithm for nonlinear optimization. Efficient when the Hessian of the objective function is sparse (i.e., relatively few nonzero cross-partial derivatives). See Braun, M. (2014) <doi:10.18637/jss.v060.i04>.
This package provides API access to the Walmart Open API <https://developer.walmartlabs.com/>, that contains data about stores, Value of the day and products which includes names, sale prices, shipping rates and taxonomies.
This r-rbenchmark package is inspired by the Perl module Benchmark, and is intended to facilitate benchmarking of arbitrary R code. The library consists of just one function, benchmark, which is a simple wrapper around system.time. Given a specification of the benchmarking process (counts of replications, evaluation environment) and an arbitrary number of expressions, benchmark evaluates each of the expressions in the specified environment, replicating the evaluation as many times as specified, and returning the results conveniently wrapped into a data frame.
This package provides a S4 class has been created such that complex operations can be executed on each cell of a raster map. The raster of objects contains a raster map with the addition of a list of generic objects: one object for each raster cells. It allows to write few lines of R code for complex map algebra. Two environmental applications about frequency analysis of raster map of precipitation and creation of a raster map of soil water retention curves have been presented.
This package performs genome-wide association studies (GWAS) on individuals that are both related and have repeated measurements. For each Single Nucleotide Polymorphism (SNP), it computes score statistic based p-values for a linear mixed model including random polygenic effects and a random effect for repeated measurements. The computed p-values can be visualized in a Manhattan plot. For more details see Ronnegard et al. (2016) <doi:10.1111/2041-210X.12535> and for more examples see <https://github.com/larsronn/RepeatABEL_Tutorials>.
This package creates JavaScript charts. The charts can be included in Shiny apps and R markdown documents, or viewed from the R console and RStudio viewer. Based on the JavaScript library amCharts 4 and the R packages htmlwidgets and reactR'. Currently available types of chart are: vertical and horizontal bar chart, radial bar chart, stacked bar chart, vertical and horizontal Dumbbell chart, line chart, scatter chart, range area chart, gauge chart, boxplot chart, pie chart, and 100% stacked bar chart.
This package efficiently obtains count vectors from indexed bam files. It counts the number of nucleotide sequence reads in given genomic ranges and it computes reads profiles and coverage profiles. It also handles paired-end data.
This package is a collection of several algorithms to obtain archetypoids with small and large databases and with both classical multivariate data and functional data (univariate and multivariate). Some of these algorithms also detect anomalies (outliers).
The mapping gem maps model objects based on their class to a given output model. It is useful for versioning external interfaces (e.g. JSON APIs) or processing structured data from one format to another.