Implementation of the Robust Exponential Decreasing Index (REDI), proposed in the article by Issa Moussa, Arthur Leroy et al. (2019) <https://bmjopensem.bmj.com/content/bmjosem/5/1/e000573.full.pdf>. The REDI represents a measure of cumulated workload, robust to missing data, providing control of the decreasing influence of workload over time. Various functions are provided to format data, compute REDI, and visualise results in a simple and convenient way.
Generates pseudo-random vectors that follow an arbitrary von Mises-Fisher distribution on a sphere. This method is fast and efficient when generating a large number of pseudo-random vectors. Functions to generate random variates and compute density for the distribution of an inner product between von Mises-Fisher random vector and its mean direction are also provided. Details are in Kang and Oh (2024) <doi:10.1007/s11222-024-10419-3>.
St implements a simple and lightweight terminal emulator. It implements 256 colors, most VT10X escape sequences, utf8, X11 copy/paste, antialiased fonts (using fontconfig), fallback fonts, resizing, and line drawing.
Schema definitions and read, write and validation tools for data formatted in accordance with the AIRR Data Representation schemas defined by the AIRR Community <http://docs.airr-community.org>.
This package provides a wrapper for ada-url', a WHATWG compliant and fast URL parser written in modern C++'. Also contains auxiliary functions such as a public suffix extractor.
This package provides functions for Maximum Likelihood Estimation, Markov Chain Monte Carlo, finding confidence intervals. The implementation is heavily based on the original Fortran source code translated to R.
This package provides a toolkit for computing and visualizing CAPL-2 (Canadian Assessment of Physical Literacy, Second Edition; <https://www.capl-eclp.ca>) scores and interpretations from raw data.
Handy functions and data to support a course book for accounting research. Gow, Ian and Tongqing Ding (2022) Accounting Research: An Introductory Course <https://iangow.github.io/far_book/>.
Estimating the number of factors in Exploratory Factor Analysis (EFA) with out-of-sample prediction errors using a cross-validation scheme. Haslbeck & van Bork (Preprint) <https://psyarxiv.com/qktsd>.
Create datasets with factorial structure through simulation by specifying variable parameters. Extended documentation at <https://debruine.github.io/faux/>. Described in DeBruine
(2020) <doi:10.5281/zenodo.2669586>.
This package implements a path algorithm for the Fused Lasso Signal Approximator. For more details see the help files or the article by Hoefling (2009) <arXiv:0910.0526>
.
Supplies a set of functions to interface with bikeshare data following the General Bikeshare Feed Specification, allowing users to query and accumulate tidy datasets for specified cities/bikeshare programs.
The gene-set distance analysis of omic data is implemented by generalizing distance correlations to evaluate the association of a gene set with categorical and censored event-time variables.
Tool for diagnosing table joins. It combines the speed of `collapse` and `data.table`, the flexibility of `dplyr`, and the diagnosis and features of the `merge` command in `Stata`.
To test if a tensor time series following a Tucker-decomposition factor model has a Kronecker product structure. Supplementary functions for tensor reshape and its reversal are also included.
This is a Neural Network regression model implementation using Keras', consisting of 10 Long Short-Term Memory layers that are fully connected along with the rest of the inputs.
An interface for interacting with OSF (<https://osf.io>). osfr enables you to access open research materials and data, or create and manage your own private or public projects.
This package provides quasi-Newton methods to minimize partially separable functions. The methods are largely described by Nocedal and Wright (2006) <doi:10.1007/978-0-387-40065-5>.
The Penn World Table 9.x (<http://www.ggdc.net/pwt/>) provides information on relative levels of income, output, inputs, and productivity for 182 countries between 1950 and 2017.
Implementation of the Stochastic Multi-Criteria Acceptability Analysis (SMAA) family of Multiple Criteria Decision Analysis (MCDA) methods. Tervonen, T. and Figueira, J. R. (2008) <doi:10.1002/mcda.407>.
Rdfind is a command line tool that finds duplicate files based on their content instead of their file names. It is useful for compressing backup directories or just finding duplicate files.
This package provides a Perl interface (Perl::Rename
) as well as a command-line utility (rename
) that can rename multiple files at once based on a Perl regular expression.
This package provides an interface to Amazon Web Services, including storage, database, and compute services, such as Simple Storage Service (S3), DynamoDB NoSQL database, and Lambda functions-as-a-service.
This package performs joint selection in Generalized Linear Mixed Models (GLMMs) using penalized likelihood methods. Specifically, the Penalized Quasi-Likelihood (PQL) is used as a loss function, and penalties are then augmented to perform simultaneous fixed and random effects selection. Regularized PQL avoids the need for integration (or approximations such as the Laplace's method) during the estimation process, and so the full solution path for model selection can be constructed relatively quickly.