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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-jmv 2.7.7
Propagated dependencies: r-vcdextra@0.9.0 r-vcd@1.4-13 r-rocr@1.0-11 r-r6@2.6.1 r-psych@2.5.6 r-pmcmr@4.4 r-nnet@7.3-20 r-mvnormtest@0.1-9-3 r-multcomp@1.4-29 r-matrixstats@1.5.0 r-mass@7.3-65 r-magrittr@2.0.4 r-lavaan@0.6-20 r-jmvcore@2.7.7 r-gparotation@2025.3-1 r-ggridges@0.5.7 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-ggally@2.4.0 r-emmeans@2.0.0 r-dplyr@1.1.4 r-car@3.1-3 r-bayesfactor@0.9.12-4.7 r-afex@1.5-0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=jmv
Licenses: GPL 2+
Build system: r
Synopsis: The 'jamovi' Analyses
Description:

This package provides a suite of common statistical methods such as descriptives, t-tests, ANOVAs, regression, correlation matrices, proportion tests, contingency tables, and factor analysis. This package is also useable from the jamovi statistical spreadsheet (see <https://www.jamovi.org> for more information).

r-jrsicklsnmf 1.2.3
Propagated dependencies: r-umap@0.2.10.0 r-scran@1.38.0 r-rlang@1.1.6 r-rdpack@2.6.4 r-rcppprogress@0.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-pbapply@1.7-4 r-matrix@1.7-4 r-mass@7.3-65 r-kknn@1.4.1 r-irlba@2.3.5.1 r-igraph@2.2.1 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-foreach@1.5.2 r-factoextra@1.0.7 r-data-table@1.17.8 r-clvalid@0.7 r-cluster@2.1.8.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=jrSiCKLSNMF
Licenses: GPL 3
Build system: r
Synopsis: Multimodal Single-Cell Omics Dimensionality Reduction
Description:

This package provides methods to perform Joint graph Regularized Single-Cell Kullback-Leibler Sparse Non-negative Matrix Factorization ('jrSiCKLSNMF', pronounced "junior sickles NMF") on quality controlled single-cell multimodal omics count data. jrSiCKLSNMF specifically deals with dual-assay scRNA-seq and scATAC-seq data. This package contains functions to extract meaningful latent factors that are shared across omics modalities. These factors enable accurate cell-type clustering and facilitate visualizations. Methods for pre-processing, clustering, and mini-batch updates and other adaptations for larger datasets are also included. For further details on the methods used in this package please see Ellis, Roy, and Datta (2023) <doi:10.3389/fgene.2023.1179439>.

r-jm 1.5-2
Propagated dependencies: r-survival@3.8-3 r-nlme@3.1-168 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: http://jmr.r-forge.r-project.org/
Licenses: GPL 2+
Build system: r
Synopsis: Joint Modeling of Longitudinal and Survival Data
Description:

Shared parameter models for the joint modeling of longitudinal and time-to-event data.

r-jpinfect 2023.2026.02
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-stringr@1.6.0 r-stringi@1.8.7 r-readxl@1.4.5 r-readr@2.1.6 r-magrittr@2.0.4 r-isoweek@0.6-2 r-httr@1.4.7 r-future-apply@1.20.0 r-future@1.68.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/TomonoriHoshi/jpinfect
Licenses: GPL 3+
Build system: r
Synopsis: Acquiring and Processing Data from Japan Institute for Health Security
Description:

Download and post process the infectious disease case data from Japan Institute for Health Security. Also the package included ready-to-analyse datasets. See the data source website for further details <https://id-info.jihs.go.jp/>.

r-jinjar 0.3.2
Propagated dependencies: r-rlang@1.1.6 r-jsonlite@2.0.0 r-fs@1.6.6 r-cpp11@0.5.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://davidchall.github.io/jinjar/
Licenses: Expat
Build system: r
Synopsis: Template Engine Inspired by 'Jinja'
Description:

Template engine powered by the inja C++ library. Users write a template document, using syntax inspired by the Jinja Python package, and then render the final document by passing data from R. The template syntax supports features such as variables, loops, conditions and inheritance.

r-jfe 2.5.11
Propagated dependencies: r-xts@0.14.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JFE
Licenses: GPL 2+
Build system: r
Synopsis: Tools for Analyzing Time Series Data of Just Finance and Econometrics
Description:

Offer procedures to download financial-economic time series data and enhanced procedures for computing the investment performance indices of Bacon (2004) <DOI:10.1002/9781119206309>.

r-jetpack 0.5.5
Propagated dependencies: r-renv@1.1.5 r-remotes@2.5.0 r-docopt@0.7.2 r-desc@1.4.3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/ankane/jetpack
Licenses: Expat
Build system: r
Synopsis: Friendly Package Manager
Description:

Manage project dependencies from your DESCRIPTION file. Create a reproducible virtual environment with minimal additional files in your project. Provides tools to add, remove, and update dependencies as well as install existing dependencies with a single function.

r-jpcity 0.3.0
Propagated dependencies: r-vctrs@0.6.5 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-purrr@1.2.0 r-pillar@1.11.1 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://uchidamizuki.github.io/jpcity/
Licenses: Expat
Build system: r
Synopsis: Read and Convert Japanese Municipality Codes
Description:

Read Japanese city codes (<https://www.e-stat.go.jp/municipalities/cities>) to get city and prefecture names, or convert to city codes at different points in time. In addition, it merges or splits wards of designated cities and gets all city codes at a specific point in time.

r-jstable 1.3.23
Propagated dependencies: r-tibble@3.3.0 r-tableone@0.13.2 r-survival@3.8-3 r-survey@4.4-8 r-rlang@1.1.6 r-purrr@1.2.0 r-nortest@1.0-4 r-magrittr@2.0.4 r-lmertest@3.1-3 r-lme4@1.1-37 r-labelled@2.16.0 r-geepack@1.3.13 r-dplyr@1.1.4 r-data-table@1.17.8 r-coxme@2.2-22 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/jinseob2kim/jstable
Licenses: ASL 2.0
Build system: r
Synopsis: Create Tables from Different Types of Regression
Description:

Create regression tables from generalized linear model(GLM), generalized estimating equation(GEE), generalized linear mixed-effects model(GLMM), Cox proportional hazards model, survey-weighted generalized linear model(svyglm) and survey-weighted Cox model results for publication.

r-jaya 1.0.3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/neerajdhanraj/Jaya
Licenses: Expat
Build system: r
Synopsis: Gradient-Free Optimization Algorithm for Single and Multi-Objective Problems
Description:

An implementation of the Jaya optimization algorithm for both single-objective and multi-objective problems. Jaya is a population-based, gradient-free optimization algorithm capable of solving constrained and unconstrained optimization problems without hyperparameters. This package includes features such as multi-objective Pareto optimization, adaptive population adjustment, and early stopping. For further details, see R.V. Rao (2016) <doi:10.5267/j.ijiec.2015.8.004>.

r-jpen 1.0
Propagated dependencies: r-mvtnorm@1.3-3
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JPEN
Licenses: GPL 2
Build system: r
Synopsis: Covariance and Inverse Covariance Matrix Estimation Using Joint Penalty
Description:

This package provides a Joint PENalty Estimation of Covariance and Inverse Covariance Matrices.

r-jfm 1.0.1
Propagated dependencies: r-rvcg@0.25 r-rockfab@1.2.1 r-rgl@1.3.31 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-randomcolor@1.1.0.1 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JFM
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Rock Mass Structural Analysis from 3D Mesh of Point Cloud
Description:

This package provides functions to extract joint planes from 3D triangular mesh derived from point cloud and makes data available for structural analysis.

r-juliacall 0.17.6
Propagated dependencies: r-rjson@0.2.23 r-rcpp@1.1.0 r-knitr@1.50
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/JuliaInterop/JuliaCall
Licenses: Expat
Build system: r
Synopsis: Seamless Integration Between R and 'Julia'
Description:

This package provides an R interface to Julia', which is a high-level, high-performance dynamic programming language for numerical computing, see <https://julialang.org/> for more information. It provides a high-level interface as well as a low-level interface. Using the high level interface, you could call any Julia function just like any R function with automatic type conversion. Using the low level interface, you could deal with C-level SEXP directly while enjoying the convenience of using a high-level programming language like Julia'.

r-jmh 1.0.3
Propagated dependencies: r-timeroc@0.4 r-survival@3.8-3 r-statmod@1.5.1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-nlme@3.1-168 r-mass@7.3-65 r-dplyr@1.1.4 r-caret@7.0-1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JMH
Licenses: GPL 3+
Build system: r
Synopsis: Joint Model of Heterogeneous Repeated Measures and Survival Data
Description:

Maximum likelihood estimation for the semi-parametric joint modeling of competing risks and longitudinal data in the presence of heterogeneous within-subject variability, proposed by Li and colleagues (2023) <arXiv:2301.06584>. The proposed method models the within-subject variability of the biomarker and associates it with the risk of the competing risks event. The time-to-event data is modeled using a (cause-specific) Cox proportional hazards regression model with time-fixed covariates. The longitudinal outcome is modeled using a mixed-effects location and scale model. The association is captured by shared random effects. The model is estimated using an Expectation Maximization algorithm.

r-joyn 0.3.0
Propagated dependencies: r-rlang@1.1.6 r-lifecycle@1.0.4 r-glue@1.8.0 r-data-table@1.17.8 r-collapse@2.1.5 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/randrescastaneda/joyn
Licenses: Expat
Build system: r
Synopsis: Tool for Diagnosis of Tables Joins and Complementary Join Features
Description:

Tool for diagnosing table joins. It combines the speed of `collapse` and `data.table`, the flexibility of `dplyr`, and the diagnosis and features of the `merge` command in `Stata`.

r-jaatha 3.2.5
Propagated dependencies: r-r6@2.6.1 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/statgenlmu/jaatha
Licenses: GPL 3+
Build system: r
Synopsis: Simulation-Based Maximum Likelihood Parameter Estimation
Description:

An estimation method that can use computer simulations to approximate maximum-likelihood estimates even when the likelihood function can not be evaluated directly. It can be applied whenever it is feasible to conduct many simulations, but works best when the data is approximately Poisson distributed. It was originally designed for demographic inference in evolutionary biology (Naduvilezhath et al., 2011 <doi:10.1111/j.1365-294X.2011.05131.x>, Mathew et al., 2013 <doi:10.1002/ece3.722>). It has optional support for conducting coalescent simulation using the coala package.

r-josae 0.3.0
Propagated dependencies: r-nlme@3.1-168
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JoSAE
Licenses: GPL 2
Build system: r
Synopsis: Unit-Level and Area-Level Small Area Estimation
Description:

Implementation of some unit and area level EBLUP estimators as well as the estimators of their MSE also under heteroscedasticity. The package further documents the publications Breidenbach and Astrup (2012) <DOI:10.1007/s10342-012-0596-7>, Breidenbach et al. (2016) <DOI:10.1016/j.rse.2015.07.026> and Breidenbach et al. (2018 in press). The vignette further explains the use of the implemented functions.

r-jmvconnect 2.5.7
Propagated dependencies: r-rcpp@1.1.0 r-rappdirs@0.3.3 r-jmvcore@2.7.7 r-httr@1.4.7 r-evaluate@1.0.5 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=jmvconnect
Licenses: GPL 2+
Build system: r
Synopsis: Connect to the 'jamovi' Statistical Spreadsheet
Description:

This package provides methods to access data sets from the jamovi statistical spreadsheet (see <https://www.jamovi.org> for more information) from R.

r-jfa 0.7.4
Propagated dependencies: r-truncdist@1.0-2 r-stanheaders@2.32.10 r-rstantools@2.5.0 r-rstan@2.32.7 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-ggplot2@4.0.1 r-extradistr@1.10.0 r-bh@1.87.0-1 r-bde@1.0.1.1
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://koenderks.github.io/jfa/
Licenses: GPL 3+
Build system: r
Synopsis: Statistical Methods for Auditing
Description:

This package provides statistical methods for auditing as implemented in JASP for Audit (Derks et al., 2021 <doi:10.21105/joss.02733>). First, the package makes it easy for an auditor to plan a statistical sample, select the sample from the population, and evaluate the misstatement in the sample compliant with international auditing standards. Second, the package provides statistical methods for auditing data, including tests of digit distributions and repeated values. Finally, the package includes methods for auditing algorithms on the aspect of fairness and bias. Next to classical statistical methodology, the package implements Bayesian equivalents of these methods whose statistical underpinnings are described in Derks et al. (2021) <doi:10.1111/ijau.12240>, Derks et al. (2024) <doi:10.2308/AJPT-2021-086>, Derks et al. (2022) <doi:10.31234/osf.io/8nf3e> Derks et al. (2024) <doi:10.31234/osf.io/tgq5z>, and Derks et al. (2025) <doi:10.31234/osf.io/b8tu2>.

r-jstree 1.2
Propagated dependencies: r-jsonlite@2.0.0 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/yonicd/jsTree
Licenses: Expat
Build system: r
Synopsis: Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
Description:

Create and customize interactive trees using the jQuery jsTree <https://www.jstree.com/> plugin library and the htmlwidgets package. These trees can be used directly from the R console, from RStudio', in Shiny apps and R Markdown documents.

r-jmdesign 1.6
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JMdesign
Licenses: GPL 2
Build system: r
Synopsis: Joint Modeling of Longitudinal and Survival Data - Power Calculation
Description:

This package performs power calculations for joint modeling of longitudinal and survival data with k-th order trajectories when the variance-covariance matrix, Sigma_theta, is unknown.

r-jsparo 1.5.0
Propagated dependencies: r-pracma@2.4.6
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JSparO
Licenses: GPL 3+
Build system: r
Synopsis: Joint Sparse Optimization via Proximal Gradient Method for Cell Fate Conversion
Description:

Implementation of joint sparse optimization (JSparO) to infer the gene regulatory network for cell fate conversion. The proximal gradient method is implemented to solve different low-order regularization models for JSparO.

r-jgr 1.9-2
Dependencies: openjdk@25
Propagated dependencies: r-rjava@1.0-11 r-javagd@0.6-6
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://rforge.net/JGR/
Licenses: GPL 2
Build system: r
Synopsis: Java GUI for R
Description:

Java GUI for R - cross-platform, universal and unified Graphical User Interface for R. For full functionality on Windows and Mac OS X JGR requires a start application which depends on your OS.

r-jpstat 0.4.0
Propagated dependencies: r-vctrs@0.6.5 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stickyr@0.1.2 r-rlang@1.1.6 r-purrr@1.2.0 r-pillar@1.11.1 r-navigatr@0.2.1 r-lifecycle@1.0.4 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/UchidaMizuki/jpstat
Licenses: Expat
Build system: r
Synopsis: Tools for Easy Use of 'e-Stat', 'RESAS' API, Etc
Description:

This package provides tools to use API such as e-Stat (<https://www.e-stat.go.jp/>), the portal site for Japanese government statistics, and RESAS (Regional Economy and Society Analyzing System, <https://resas.go.jp>).

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Total results: 68658