This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Test3\_probe\_tab.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was wheat\_probe\_tab.

Simple animated versions of basic R plots, using the animation package. Includes animated versions of plot, barplot, persp, contour, filled.contour, hist, curve, points, lines, text, symbols, segments, and arrows.

This package provides a function for fitting Poisson and negative binomial regression models when the number of parameters exceeds the sample size, using the the generalized monotone incremental forward stagewise method.

Estimates latent class vector-autoregressive models via EM algorithm on time-series data for model-based clustering and classification. Includes model selection criteria for selecting the number of lags and clusters.

Helpers functions to process, analyse, and visualize the output of single locus species delimitation methods. For full functionality, please install suggested software at <https://legallab.github.io/delimtools/articles/install.html>.

Apply the Deductive Rational Method to a monthly series of flow or precipitation data to fill in missing data. The method is as described in: Campos, D.F., (1984, ISBN:9686194444).

This package contains the example EEG data used in the package eegkit. Also contains code for easily creating larger EEG datasets from the EEG Database on the UCI Machine Learning Repository.

GWAS R API Data Download. This package provides easy access to the NHGRI'-'EBI GWAS Catalog data by accessing the REST API <https://www.ebi.ac.uk/gwas/rest/docs/api/>.

Several handy plots for quickly looking at the relationship between two numeric vectors of equal length. Quickly visualize scatter plots, residual plots, qq-plots, box plots, confidence intervals, and prediction intervals.

Generates a fit plot for diagnosing misspecification in models of binary dependent variables, and calculates the related heatmap fit statistic described in Esarey and Pierce (2012) <DOI:10.1093/pan/mps026>.

This package provides a collection of functions that facilitate computational steps related to advice for fisheries management, according to ICES guidelines. These include methods for calculating reference points and model diagnostics.

Extends package nat (NeuroAnatomy Toolbox) by providing a collection of NBLAST-related functions for neuronal morphology comparison (Costa et al. (2016) <doi: 10.1016/j.neuron.2016.06.012>).

Collection of utility functions supporting statistical modeling, regression analysis, and network analysis workflows used in data science research. Includes tools for model selection, matrix operations, graph analysis, and related statistical computations.

Easily create pretty popup messages (modals) in Shiny'. A modal can contain text, images, OK/Cancel buttons, an input to get a response from the user, and many more customizable options.

The <http://standartox.uni-landau.de> database offers cleaned, harmonized and aggregated ecotoxicological test data, which can be used for assessing effects and risks of chemical concentrations found in the environment.

Detection of outliers in time series following the Chen and Liu (1993) <DOI:10.2307/2290724> procedure. Innovational outliers, additive outliers, level shifts, temporary changes and seasonal level shifts are considered.

This package provides a Redis-based back-end for BiocParallel, enabling an alternative mechanism for distributed computation. The The manager distributes tasks to a worker pool through a central Redis server, rather than directly to workers as with other BiocParallel implementations. This means that the worker pool can change dynamically during job evaluation. All features of BiocParallel are supported, including reproducible random number streams, logging to the manager, and alternative load balancing task distributions.

Rectangle packing is a packing problem where rectangles are placed into a larger rectangular region (without overlapping) in order to maximise the use space. Rectangles are packed using the skyline heuristic as discussed in Lijun et al (2011) A Skyline-Based Heuristic for the 2D Rectangular Strip Packing Problem <doi:10.1007/978-3-642-21827-9_29>. A function is also included for determining a good small-sized box for containing a given set of rectangles.

Implemented are an ANOVA-type test statistic for testing hypotheses formulated in Mann-Whitney-type effects in nonparametric factorial designs. Statistical inference is based on a wild or a sample-specific bootstrap approach as described in Dobler et al. (2019) <doi:10.1007/s10463-019-00717-3>'. The unweighted treatment effects considered do not depend on sample sizes and allow for transitive ordering. The package thus provides an extension of the univariate rankFD package to multivariate data.

This is an R package to query and expand DisGeNET data, and to visualize the results within R framework. The disgenet2r package is designed to retrieve data from DisGeNET v6.0 (Jan, 2019).

Fivemat is a MiniTest/RSpec/Cucumber formatter that gives each test file its own line of dots during testing. It aims to provide test output that is neither too verbose nor too minimal.

Gettext is a GNU gettext-like program for Ruby. The catalog file (po-file) used is the same as that used by GNU gettext, allowing you to use GNU gettext tools for maintenance.

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was E\_coli\_probe\_tab.