To build a shiny app for visualization of the hierarchy of PheCode
Mapping with International Classification of Diseases (ICD). The same PheCode
hierarchy is displayed in two ways: as a sunburst plot and as a tree.
This package provides a high performance package implementing random effects and/or sample selection models for panel count data. The details of the models are discussed in Peng and Van den Bulte (2023) <doi:10.2139/ssrn.2702053>.
Person fit statistics based on Quality Control measures are provided for questionnaires and tests given a specified IRT model. Statistics based on Cumulative Sum (CUSUM) charts are provided. Options are given for banks with polytomous and dichotomous data.
This package provides functions for assigning treatments in randomized experiments using near-optimal threshold blocking. The package is made with large data sets in mind and derives blocks more than an order of magnitude quicker than other methods.
Small area estimation unit level models (Battese-Harter-Fuller model) with a Bayesian Hierarchical approach. See also Rao & Molina (2015, ISBN:978-1-118-73578-7) and Battese et al. (1988) <doi:10.1080/01621459.1988.10478561>.
This package provides an easy-to-use module for adding a chat to a Shiny app. Allows users to send messages and view messages from other users. Messages can be stored in a database or a .rds file.
This package provides a set of wrapper functions for Visa Chart Components'. Visa Chart Components <https://github.com/visa/visa-chart-components> is an accessibility focused, framework agnostic set of data experience design systems components for the web.
Automates set operations (i.e., comparisons of overlap) between multiple vectors. It also contains a function for automating reporting in RMarkdown', by generating markdown output for easy analysis, as well as an RMarkdown template for use with RStudio'.
Formal implementation of White test of heteroskedasticity and a bootstrapped version of it, developed under the methodology of Jeong, J., Lee, K. (1999) <https://yonsei.pure.elsevier.com/en/publications/bootstrapped-whites-test-for-heteroskedasticity-in-regression-mod>.
This package provides a streamlined tool provides a graphical user interface for quality control based signal drift correction (QC-RFSC), integration of data from multi-batch MS-based experiments, and the comprehensive statistical analysis in metabolomics and proteomics.
Typenum is a Rust library for type-level numbers evaluated at compile time. It currently supports bits, unsigned integers, and signed integers. It also provides a type-level array of type-level numbers, but its implementation is incomplete.
This package is an implementation of parser combinators for Rust, inspired by the Haskell library Parsec. As in Parsec the parsers are LL(1) by default but they can opt-in to arbitrary lookahead using the attempt combinator.
This package is an implementation of parser combinators for Rust, inspired by the Haskell library Parsec. As in Parsec the parsers are LL(1) by default but they can opt-in to arbitrary lookahead using the attempt combinator.
This package provides rpcsvc
protocol.x
files and headers that are not included with the libtirpc
package. Additionally it contains rpcgen
, which is used to produce header files and sources from the protocol files.
Assertthat is an extension to stopifnot() that makes it easy to declare the pre and post conditions that your code should satisfy, while also producing friendly error messages so that your users know what they've done wrong.
This package provides a Rust implementation of fast and scalable minimal perfect hashing for massive key sets. It generates an MPHF for a collection of hashable objects.
Simulation of bivariate uniform data with a full range of correlations based on two beta densities and computation of the tetrachoric correlation (correlation of bivariate uniform data) from the phi coefficient (correlation of bivariate binary data) and vice versa.
Analyze and plot the abundance of different RNA biotypes present in a count matrix, this evaluation can be useful if you want to test different strategies of normalization or analyze a particular biotype in a differential gene expression analysis.
This package implements variable selection for high dimensional datasets with a binary response variable using the EM algorithm. Both probit and logit models are supported. Also included is a useful function to generate high dimensional data with correlated variables.
This package contains selected variables from the time series profiles for statistical areas level 2 from the 2006, 2011, and 2016 censuses of population and housing, Australia. Also provides methods for viewing the questions asked for convenience during analysis.
Easily install and load all packages and functions used in CourseKata
courses. Aid teaching with helper functions and augment generic functions to provide cohesion between the network of packages. Learn more about CourseKata
at <https://coursekata.org>.
Create descriptive tables for continuous and categorical variables. Apply summary statistics and counting function, with or without a grouping variable, and create beautiful reports using rmarkdown or officer'. You can also compute effect sizes and statistical tests if needed.
For an observational study with binary treatment, binary outcome and K strata, implements a d-statistic that uses those strata most insensitive to unmeasured bias in treatment assignment.<doi:10.1093/biomet/asaa032> The package has one function, dstat2x2xk.
This package provides statistical tests and support functions for detecting irregular digit patterns in numerical data. The package includes tools for extracting digits at various locations in a number, tests for repeated values, and (Bayesian) tests of digit distributions.