_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
r-highcharter 0.9.4
Propagated dependencies: r-zoo@1.8-14 r-yaml@2.3.10 r-xts@0.14.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rlist@0.4.6.2 r-rlang@1.1.6 r-rjson@0.2.23 r-quantmod@0.4.28 r-purrr@1.2.0 r-magrittr@2.0.4 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-igraph@2.2.1 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-dplyr@1.1.4 r-broom@1.0.10 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://jkunst.com/highcharter/
Licenses: Expat
Synopsis: Wrapper for the 'Highcharts' Library
Description:

This package provides a wrapper for the Highcharts library including shortcut functions to plot R objects. Highcharts <https://www.highcharts.com/> is a charting library offering numerous chart types with a simple configuration syntax.

r-jacobieigen 0.3-4
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=JacobiEigen
Licenses: GPL 2+
Synopsis: Classical Jacobi Eigenvalue Algorithm
Description:

This package implements the classical Jacobi algorithm for the eigenvalues and eigenvectors of a real symmetric matrix, both in pure R and in C++ using Rcpp'. Mainly as a programming example for teaching purposes.

r-lingglosses 0.0.11
Propagated dependencies: r-rmarkdown@2.30 r-knitr@1.50 r-kableextra@1.4.0 r-htmltools@0.5.8.1 r-gt@1.2.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://CRAN.R-project.org/package=phonfieldwork
Licenses: GPL 3+
Synopsis: Interlinear Glossed Linguistic Examples and Abbreviation Lists Generation
Description:

Helps to render interlinear glossed linguistic examples in html rmarkdown documents and then semi-automatically compiles the list of glosses at the end of the document. It also provides a database of linguistic glosses.

r-openairmaps 0.9.1
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-sf@1.0-23 r-rosm@0.3.0 r-rlang@1.1.6 r-purrr@1.2.0 r-prettymapr@0.2.5 r-openair@2.19.0 r-mgcv@1.9-4 r-magrittr@2.0.4 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-leaflet@2.2.3 r-ggtext@0.1.2 r-ggspatial@1.1.10 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://davidcarslaw.github.io/openairmaps/
Licenses: GPL 3+
Synopsis: Create Maps of Air Pollution Data
Description:

Combine the air quality data analysis methods of openair with the JavaScript Leaflet (<https://leafletjs.com/>) library. Functionality includes plotting site maps, "directional analysis" figures such as polar plots, and air mass trajectories.

r-palettetown 0.1.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/timcdlucas/palettetown
Licenses: Expat
Synopsis: Use Pokemon Inspired Colour Palettes
Description:

Use Pokemon(R) inspired palettes with additional ggplot2 scales. Palettes are the colours in each Pokemon's sprite, ordered by how common they are in the image. The first 386 Pokemon are currently provided.

r-timechecker 1.1.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=timechecker
Licenses: GPL 3
Synopsis: Visualization of Processing Time with Standard Output
Description:

Displays processing time in a clear and structured way. One function supports iterative workflows by predicting and showing the total time required, while another reports the time taken for individual steps within a process.

r-viraldomain 0.0.7
Propagated dependencies: r-workflows@1.3.0 r-tidyselect@1.2.1 r-recipes@1.3.1 r-ranger@0.17.0 r-parsnip@1.3.3 r-magrittr@2.0.4 r-kknn@1.4.1 r-earth@5.3.4 r-dplyr@1.1.4 r-applicable@0.1.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=viraldomain
Licenses: Expat
Synopsis: Applicability Domain Methods of Viral Load and CD4 Lymphocytes
Description:

This package provides methods for assessing the applicability domain of models that predict viral load and CD4 (Cluster of Differentiation 4) lymphocyte counts. These methods help determine the extent of extrapolation when making predictions.

r-yatchewtest 1.1.1
Propagated dependencies: r-rcpp@1.1.0 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/y.scm (guix-cran packages y)
Home page: https://cran.r-project.org/package=YatchewTest
Licenses: Expat
Synopsis: Yatchew (1997), De Chaisemartin & D'Haultfoeuille (2024) Linearity Test
Description:

Test of linearity originally proposed by Yatchew (1997) <doi:10.1016/S0165-1765(97)00218-8> and improved by de Chaisemartin & D'Haultfoeuille (2024) <doi:10.2139/ssrn.4284811> to be robust under heteroskedasticity.

gitlab-runner 17.9.0
Dependencies: git@2.52.0 bash@5.2.37
Channel: guix-hpc-non-free
Location: guix-hpc-non-free/packages/gitlab.scm (guix-hpc-non-free packages gitlab)
Home page: https://gitlab.com/gitlab-org/gitlab-runner
Licenses: Expat
Synopsis: Gitlab Runner
Description:

The official GitLab Runner written in Go. It runs tests and sends the results to GitLab. GitLab CI is the open-source continuous integration service included with GitLab that coordinates the testing.

roman-to-kana 50a4b5a044f8efaf7daa8560d8bc6002279f2849
Channel: guixrus
Location: guixrus/packages/misc.scm (guixrus packages misc)
Home page: https://github.com/klampworks/roman-to-kana
Licenses: GPL 2+
Synopsis: Tool for converting roman text to kana
Description:

roman-to-kana is a tool for converting roman (English) text to kana (Japanese).

The first command line argument is taken as the input string:

roman_to_kana "text to be translated"

r-reactomegsa 1.24.0
Propagated dependencies: r-tidyr@1.3.1 r-summarizedexperiment@1.40.0 r-rcolorbrewer@1.1-3 r-progress@1.2.3 r-jsonlite@2.0.0 r-igraph@2.2.1 r-httr@1.4.7 r-gplots@3.2.0 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-biocsingular@1.26.1 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://github.com/reactome/ReactomeGSA
Licenses: Expat
Synopsis: Client for the Reactome Analysis Service for comparative multi-omics gene set analysis
Description:

The ReactomeGSA packages uses Reactome's online analysis service to perform a multi-omics gene set analysis. The main advantage of this package is, that the retrieved results can be visualized using REACTOME's powerful webapplication. Since Reactome's analysis service also uses R to perfrom the actual gene set analysis you will get similar results when using the same packages (such as limma and edgeR) locally. Therefore, if you only require a gene set analysis, different packages are more suited.

r-r2d2ordinal 1.0.2
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.5.0 r-rstan@2.32.7 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-laplacesdemon@16.1.6 r-gigrvg@0.8 r-extradistr@1.10.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=R2D2ordinal
Licenses: Expat
Synopsis: Implements Pseudo-R2D2 Prior for Ordinal Regression
Description:

This package implements the pseudo-R2D2 prior for ordinal regression from the paper "Pseudo-R2D2 prior for high-dimensional ordinal regression" by Yanchenko (2025) <doi:10.1007/s11222-025-10667-x>. In particular, it provides code to evaluate the probability distribution function for the cut-points, compute the log-likelihood, calculate the hyper-parameters for the global variance parameter, find the distribution of McFadden's coefficient-of-determination, and fit the model in rstan'. Please cite the paper if you use these codes.

r-wiggleplotr 1.34.0
Propagated dependencies: r-assertthat@0.2.1 r-cowplot@1.2.0 r-dplyr@1.1.4 r-genomeinfodb@1.46.0 r-genomicranges@1.62.0 r-ggplot2@4.0.1 r-iranges@2.44.0 r-purrr@1.2.0 r-rtracklayer@1.70.0 r-s4vectors@0.48.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/wiggleplotr/
Licenses: ASL 2.0
Synopsis: Make read coverage plots from BigWig files
Description:

This package provides tools to visualize read coverage from sequencing experiments together with genomic annotations (genes, transcripts, peaks). Introns of long transcripts can be rescaled to a fixed length for better visualization of exonic read coverage.

r-chipkernels 1.1-1.c9cfcac
Propagated dependencies: r-iranges@2.44.0 r-xvector@0.50.0 r-biostrings@2.78.0 r-bsgenome@1.78.0 r-gtools@3.9.5 r-genomicranges@1.62.0 r-sfsmisc@1.1-23 r-kernlab@0.9-33 r-s4vectors@0.48.0 r-biocgenerics@0.56.0
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/ManuSetty/ChIPKernels
Licenses: GPL 2+
Synopsis: Build string kernels for DNA Sequence analysis
Description:

ChIPKernels is an R package for building different string kernels used for DNA Sequence analysis. A dictionary of the desired kernel must be built and this dictionary can be used for determining kernels for DNA Sequences.

guile-ares-rs 0.9.6
Dependencies: bash-minimal@5.2.37 guile@3.0.9
Propagated dependencies: guile-fibers@1.4.2 guile-custom-ports@1.2
Channel: guix
Location: gnu/packages/guile-xyz.scm (gnu packages guile-xyz)
Home page: https://git.sr.ht/~abcdw/guile-ares-rs
Licenses: GPL 3+
Synopsis: Asynchronous Reliable Extensible Sleek RPC Server for Guile
Description:

Asynchronous Reliable Extensible Sleek RPC Server for Guile. It's based on nREPL protocol and can be used for programmable interactions with a running guile processes, for implementing REPLs, IDEs, test runners or other tools.

ruby-diff-lcs 1.3
Channel: guix
Location: gnu/packages/ruby-check.scm (gnu packages ruby-check)
Home page: https://github.com/halostatue/diff-lcs
Licenses: Expat
Synopsis: Compute the difference between two Enumerable sequences
Description:

Diff::LCS computes the difference between two Enumerable sequences using the McIlroy-Hunt longest common subsequence (LCS) algorithm. It includes utilities to create a simple HTML diff output format and a standard diff-like tool.

r-apcanalysis 1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=APCanalysis
Licenses: GPL 3
Synopsis: Analysis of Unreplicated Orthogonal Experiments using All Possible Comparisons
Description:

Analysis of data from unreplicated orthogonal experiments such as 2-level factorial and fractional factorial designs and Plackett-Burman designs using the all possible comparisons (APC) methodology developed by Miller (2005) <doi:10.1198/004017004000000608>.

r-basictabler 1.0.4
Propagated dependencies: r-r6@2.6.1 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: http://www.basictabler.org.uk/
Licenses: GPL 3
Synopsis: Construct Rich Tables for Output to 'HTML'/'Excel'
Description:

Easily create tables from data frames/matrices. Create/manipulate tables row-by-row, column-by-column or cell-by-cell. Use common formatting/styling to output rich tables as HTML', HTML widgets or to Excel'.

r-connections 0.2.1
Propagated dependencies: r-uuid@1.2-1 r-rscontract@0.1.2 r-pins@1.4.1 r-dplyr@1.1.4 r-dbplyr@2.5.1 r-dbi@1.2.3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/rstudio/connections
Licenses: Expat
Synopsis: Integrates with the 'RStudio' Connections Pane and 'pins'
Description:

Enables DBI compliant packages to integrate with the RStudio connections pane, and the pins package. It automates the display of schemata, tables, views, as well as the preview of the table's top 1000 records.

r-crtconjoint 0.1.0
Propagated dependencies: r-snow@0.4-4 r-rcpp@1.1.0 r-foreach@1.5.2 r-dosnow@1.0.20
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/daewoongham97/CRTConjoint
Licenses: GPL 3+
Synopsis: Conditional Randomization Testing (CRT) Approach for Conjoint Analysis
Description:

Computes p-value according to the CRT using the HierNet test statistic. For more details, see Ham, Imai, Janson (2022) "Using Machine Learning to Test Causal Hypotheses in Conjoint Analysis" <arXiv:2201.08343>.

r-catencoders 0.1.1
Propagated dependencies: r-matrix@1.7-4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CatEncoders
Licenses: GPL 2 GPL 3
Synopsis: Encoders for Categorical Variables
Description:

This package contains some commonly used categorical variable encoders, such as LabelEncoder and OneHotEncoder'. Inspired by the encoders implemented in Python sklearn.preprocessing package (see <http://scikit-learn.org/stable/modules/preprocessing.html>).

r-dglmextpois 0.2.4
Propagated dependencies: r-nloptr@2.2.1 r-compoissonreg@0.8.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/franciscomartinezdelrio/DGLMExtPois
Licenses: GPL 2
Synopsis: Double Generalized Linear Models Extending Poisson Regression
Description:

Model estimation, dispersion testing and diagnosis of hyper-Poisson Saez-Castillo, A.J. and Conde-Sanchez, A. (2013) <doi:10.1016/j.csda.2012.12.009> and Conway-Maxwell-Poisson Huang, A. (2017) regression models.

r-edgebundler 0.1.4
Propagated dependencies: r-shiny@1.11.1 r-rjson@0.2.23 r-igraph@2.2.1 r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/garthtarr/edgebundleR
Licenses: GPL 3+
Synopsis: Circle Plot with Bundled Edges
Description:

Generates interactive circle plots with the nodes around the circumference and linkages between the connected nodes using hierarchical edge bundling via the D3 JavaScript library. See <http://d3js.org/> for more information on D3.

r-mapaccuracy 0.1.2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mapaccuracy
Licenses: Expat
Synopsis: Unbiased Thematic Map Accuracy and Area
Description:

Unbiased estimators of overall and per-class thematic map accuracy and area published in Olofsson et al. (2014) <doi:10.1016/j.rse.2014.02.015> and Stehman (2014) <doi:10.1080/01431161.2014.930207>.

Page: 12345678910111213141516171819202122232425262728293031323334353637383940414243444546474849505152535455565758596061626364656667686970717273747576777879808182838485868788899091929394959697989910010110210310410510610710810911011111211311411511611711811912012112212312412512612712812913013113213313413513613713813914014114214314414514614714814915015115215315415515615715815916016116216316416516616716816917017117217317417517617717817918018118218318418518618718818919019119219319419519619719819920020120220320420520620720820921021121221321421521621721821922022122222322422522622722822923023123223323423523623723823924024124224324424524624724824925025125225325425525625725825926026126226326426526626726826927027127227327427527627727827928028128228328428528628728828929029129229329429529629729829930030130230330430530630730830931031131231331431531631731831932032132232332432532632732832933033133233333433533633733833934034134234334434534634734834935035135235335435535635735835936036136236336436536636736836937037137237337437537637737837938038138238338438538638738838939039139239339439539639739839940040140240340440540640740840941041141241341441541641741841942042142242342442542642742842943043143243343443543643743843944044144244344444544644744844945045145245345445545645745845946046146246346446546646746846947047147247347447547647747847948048148248348448548648748848949049149249349449549649749849950050150250350450550650750850951051151251351451551651751851952052152252352452552652752852953053153253353453553653753853954054154254354454554654754854955055155255355455555655755855956056156256356456556656756856957057157257357457557657757857958058158258358458558658758858959059159259359459559659759859960060160260360460560660760860961061161261361461561661761861962062162262362462562662762862963063163263363463563663763863964064164264364464564664764864965065165265365465565665765865966066166266366466566666766866967067167267367467567667767867968068168268368468568668768868969069169269369469569669769869970070170270370470570670770870971071171271371471571671771871972072172272372472572672772872973073173273373473573673773873974074174274374474574674774874975075175275375475575675775875976076176276376476576676776876977077177277377477577677777877978078178278378478578678778878979079179279379479579679779879980080180280380480580680780880981081181281381481581681781881982082182282382482582682782882983083183283383483583683783883984084184284384484584684784884985085185285385485585685785885986086186286386486586686786886987087187287387487587687787887988088188288388488588688788888989089189289389489589689789889990090190290390490590690790890991091191291391491591691791891992092192292392492592692792892993093193293393493593693793893994094194294394494594694794894995095195295395495595695795895996096196296396496596696796896997097197297397497597697797897998098198298398498598698798898999099199299399499599699799899910001001100210031004100510061007100810091010101110121013101410151016101710181019102010211022102310241025102610271028102910301031103210331034103510361037103810391040104110421043104410451046104710481049105010511052105310541055105610571058105910601061106210631064106510661067106810691070107110721073107410751076107710781079108010811082108310841085108610871088108910901091109210931094109510961097109810991100110111021103110411051106110711081109111011111112111311141115111611171118111911201121112211231124112511261127112811291130113111321133113411351136113711381139114011411142114311441145114611471148114911501151115211531154115511561157115811591160116111621163116411651166116711681169117011711172117311741175117611771178117911801181118211831184118511861187118811891190119111921193119411951196119711981199120012011202120312041205120612071208120912101211121212131214121512161217121812191220122112221223122412251226122712281229123012311232123312341235123612371238123912401241124212431244124512461247124812491250125112521253125412551256125712581259126012611262126312641265126612671268
Total results: 30423