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r-genesummary 0.99.6
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://github.com/jokergoo/GeneSummary
Licenses: Expat
Synopsis: RefSeq Gene Summaries
Description:

This package provides long description of genes collected from the RefSeq database. The text in "COMMENT" section started with "Summary" is extracted as the description of the gene. The long text descriptions can be used for analysis such as text mining.

r-ahptopsis2n 0.2.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=ahptopsis2n
Licenses: GPL 3
Synopsis: Hybrid Method for Multiple Criteria Decision-Making (MCDM)
Description:

Implementation of a hybrid MCDM method build from the AHP (Analytic Hierarchy Process) and TOPSIS-2N (Technique for Order of Preference by Similarity to Ideal Solution - with two normalizations). This method is described in Souza et al. (2018) <doi: 10.1142/S0219622018500207>.

r-boilerpiper 1.3.2
Propagated dependencies: r-rjava@1.0-11
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/mannau/boilerpipeR
Licenses: ASL 2.0
Synopsis: Interface to the Boilerpipe Java Library
Description:

Generic Extraction of main text content from HTML files; removal of ads, sidebars and headers using the boilerpipe <https://github.com/kohlschutter/boilerpipe> Java library. The extraction heuristics from boilerpipe show a robust performance for a wide range of web site templates.

r-equalden-hd 1.2.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=Equalden.HD
Licenses: GPL 2
Synopsis: Testing the Equality of a High Dimensional Set of Densities
Description:

The equality of a large number k of densities is tested by measuring the L2 distance between the corresponding kernel density estimators and the one based on the pooled sample. The test even works for sample sizes as small as 2.

r-gamlss-cens 5.0-7
Propagated dependencies: r-survival@3.8-3 r-gamlss-dist@6.1-1 r-gamlss@5.5-0
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://www.gamlss.com/
Licenses: GPL 2 GPL 3
Synopsis: Fitting an Interval Response Variable Using `gamlss.family' Distributions
Description:

This is an add-on package to GAMLSS. The purpose of this package is to allow users to fit interval response variables in GAMLSS models. The main function gen.cens() generates a censored version of an existing GAMLSS family distribution.

r-htmlreportr 1.0.0
Propagated dependencies: r-xfun@0.54 r-mime@0.13 r-knitr@1.50 r-jsonlite@2.0.0 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/AEstebanMar/htmlreportR
Licenses: GPL 3+
Synopsis: 'HTML' Reporting Made Simple(R)
Description:

Create compressed, interactive HTML (Hypertext Markup Language) reports with embedded Python code, custom JS ('JavaScript') and CSS (Cascading Style Sheets), and wrappers for CanvasXpress plots, networks and more. Based on <https://pypi.org/project/py-report-html/>, its sister project.

r-isoplotrgui 6.8
Propagated dependencies: r-shinylight@1.2 r-isoplotr@6.8
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/pvermees/IsoplotRgui/
Licenses: GPL 3
Synopsis: Web Interface to 'IsoplotR'
Description:

This package provides a graphical user interface to the IsoplotR package for radiometric geochronology. The GUI runs in an internet browser and can either be used offline, or hosted on a server to provide online access to the IsoplotR toolbox.

r-meconetcomp 0.6.1
Propagated dependencies: r-reshape2@1.4.5 r-r6@2.6.1 r-microeco@1.16.0 r-magrittr@2.0.4 r-igraph@2.2.1 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/ChiLiubio/meconetcomp
Licenses: GPL 3
Synopsis: Compare Microbial Networks of 'trans_network' Class of 'microeco' Package
Description:

Compare microbial co-occurrence networks created from trans_network class of microeco package <https://github.com/ChiLiubio/microeco>. This package is the extension of trans_network class of microeco package and especially useful when different networks are constructed and analyzed simultaneously.

r-partialised 0.1.1
Propagated dependencies: r-vctrs@0.6.5 r-rlang@1.1.6 r-purrr@1.2.0 r-pillar@1.11.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/UchidaMizuki/partialised
Licenses: Expat
Synopsis: Partialised Functions
Description:

This package provides a partialised class that extends the partialising function of purrr by making it easier to change the arguments. This is similar to the function-like object in Julia (<https://docs.julialang.org/en/v1/manual/methods/#Function-like-objects>).

r-shinykanban 0.0.1
Propagated dependencies: r-shiny@1.11.1 r-reactr@0.6.1 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-bsicons@0.1.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ugurdar/shinykanban
Licenses: Expat
Synopsis: Create Kanban Board in Shiny Applications
Description:

This package provides an interactive Kanban board widget for shiny applications. It allows users to manage tasks using a drag-and-drop interface and offers customizable styling options. shinykanban is ideal for project management, task tracking, and agile workflows within shiny apps.

r-statgengwas 1.0.12
Propagated dependencies: r-sommer@4.4.4 r-rlang@1.1.6 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-lmmsolver@1.0.12 r-ggplot2@4.0.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://biometris.github.io/statgenGWAS/index.html
Licenses: GPL 3
Synopsis: Genome Wide Association Studies
Description:

Fast single trait Genome Wide Association Studies (GWAS) following the method described in Kang et al. (2010), <doi:10.1038/ng.548>. One of a series of statistical genetic packages for streamlining the analysis of typical plant breeding experiments developed by Biometris.

r-ropercenter 0.3.2
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rselenium@1.7.9 r-rio@1.2.4 r-readr@2.1.6 r-purrr@1.2.0 r-netstat@0.1.2 r-magrittr@2.0.4 r-haven@2.5.5 r-foreign@0.8-90 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/fsolt/ropercenter
Licenses: Expat
Synopsis: Reproducible Data Retrieval from the Roper Center Data Archive
Description:

Reproducible, programmatic retrieval of datasets from the Roper Center data archive. The Roper Center for Public Opinion Research <https://ropercenter.cornell.edu> maintains the largest archive of public opinion data in existence, but researchers using these datasets are caught in a bind. The Center's terms and conditions bar redistribution of downloaded datasets, but to ensure that one's work can be reproduced, assessed, and built upon by others, one must provide access to the raw data one employed. The `ropercenter` package cuts this knot by providing registered users with programmatic, reproducible access to Roper Center datasets from within R.

r-paws-common 0.8.7
Propagated dependencies: r-base64enc@0.1-3 r-curl@7.0.0 r-digest@0.6.39 r-httr2@1.2.1 r-jsonlite@2.0.0 r-rcpp@1.1.0 r-xml2@1.5.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=paws.common
Licenses: ASL 2.0
Synopsis: Paws low-level Amazon Web Services API
Description:

This package provides functions for making low-level API requests to Amazon Web Services. The functions handle building, signing, and sending requests, and receiving responses. They are designed to help build higher-level interfaces to individual services, such as Simple Storage Service (S3).

r-safetensors 0.2.0
Propagated dependencies: r-cli@3.6.5 r-jsonlite@2.0.0 r-r6@2.6.1 r-rlang@1.1.6
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/mlverse/safetensors
Licenses: Expat
Synopsis: Safetensors file format
Description:

This package provides a file format for storing tensors that is secure (doesn't allow for code execution), fast and simple to implement. safetensors also enables cross language and cross frameworks compatibility making it an ideal format for storing machine learning model weights.

python-rjsmin 1.2.3
Channel: guix
Location: gnu/packages/python-xyz.scm (gnu packages python-xyz)
Home page: http://opensource.perlig.de/rjsmin/
Licenses: ASL 2.0
Synopsis: Javascript Minifier
Description:

rJSmin is a javascript minifier written in Python. The minifier is based on the semantics of jsmin.c by Douglas Crockford. The module is a re-implementation aiming for speed, so it can be used at runtime (rather than during a preprocessing step).

ruby-tomparse 0.4.2
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: http://rubyworks.github.com/tomparse/
Licenses: FreeBSD
Synopsis: TomDoc parser for Ruby
Description:

TomParse is a TomDoc parser for Ruby. It takes a code comment as input and parses it into a convenient object-oriented structure in accordance with the TomDoc standard. See TomDoc for more information about the TomDoc format.

r-cellxgenedp 1.14.0
Propagated dependencies: r-shiny@1.11.1 r-rjsoncons@1.3.2 r-httr@1.4.7 r-dt@0.34.0 r-dplyr@1.1.4 r-curl@7.0.0 r-cli@3.6.5
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://mtmorgan.github.io/cellxgenedp/
Licenses: Artistic License 2.0
Synopsis: Discover and Access Single Cell Data Sets in the CELLxGENE Data Portal
Description:

The cellxgene data portal (https://cellxgene.cziscience.com/) provides a graphical user interface to collections of single-cell sequence data processed in standard ways to count matrix summaries. The cellxgenedp package provides an alternative, R-based inteface, allowind data discovery, viewing, and downloading.

r-splinetimer 1.38.0
Propagated dependencies: r-longitudinal@1.1.13 r-limma@3.66.0 r-igraph@2.2.1 r-gtools@3.9.5 r-gseabase@1.72.0 r-genenet@1.2.17 r-fis@1.38.0 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/splineTimeR
Licenses: GPL 3
Synopsis: Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction
Description:

This package provides functions for differential gene expression analysis of gene expression time-course data. Natural cubic spline regression models are used. Identified genes may further be used for pathway enrichment analysis and/or the reconstruction of time dependent gene regulatory association networks.

r-asciichartr 0.1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=asciichartr
Licenses: Expat
Synopsis: Lightweight ASCII Line Graphs
Description:

Create ASCII line graphs of a time series directly on your terminal in an easy way. There are some configurations you can add to make the plot the way you like. This project was inspired by the original asciichart package by Igor Kroitor.

r-armadillo4r 0.7.0
Propagated dependencies: r-cpp4r@0.4.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://pacha.dev/armadillo4r/
Licenses: FSDG-compatible
Synopsis: An 'Armadillo' Interface
Description:

This package provides function declarations and inline function definitions that facilitate communication between R and the Armadillo C++ library for linear algebra and scientific computing. This implementation is derived from Vargas Sepulveda and Schneider Malamud (2024) <doi:10.1016/j.softx.2025.102087>.

r-cocktailapp 0.2.4
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-shinythemes@1.2.0 r-shiny@1.11.1 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-forcats@1.0.1 r-dt@0.34.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/shabbychef/cocktailApp
Licenses: LGPL 3
Synopsis: 'shiny' App to Discover Cocktails
Description:

This package provides a shiny app to discover cocktails. The app allows one to search for cocktails by ingredient, filter on rating, and number of ingredients. The package also contains data with the ingredients of nearly 26 thousand cocktails scraped from the web.

r-equalrepeat 0.4.0
Propagated dependencies: r-zip@2.3.3 r-viridislite@0.4.2 r-vars@1.6-1 r-urca@1.3-4 r-tseries@0.10-58 r-stringr@1.6.0 r-rstatix@0.7.3 r-irr@0.84.1 r-ggplot2@4.0.1 r-forecast@8.24.0 r-desctools@0.99.60 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://sites.google.com/view/equal-group/home
Licenses: GPL 3+
Synopsis: Algorithm Driven Time Series Analysis for Researchers without Coding Skills
Description:

Support functions for R-based EQUAL-STATS software which automatically classifies the data and performs appropriate statistical tests. EQUAL-STATS software is a shiny application with an user-friendly interface to perform complex statistical analysis. Gurusamy,K (2024)<doi:10.5281/zenodo.13354162>.

r-featureflag 0.2.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/szymanskir/featureflag
Licenses: Expat
Synopsis: Turn Features On and Off using Feature Flags
Description:

Feature flags allow developers to turn features of their software on and off in form of configuration. This package provides functions for creating feature flags in code. It exposes an interface for defining own feature flags which are enabled based on custom criteria.

r-logicforest 2.1.2
Propagated dependencies: r-survival@3.8-3 r-logicreg@1.6.6
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=LogicForest
Licenses: GPL 3
Synopsis: Logic Forest
Description:

Logic Forest is an ensemble machine learning method that identifies important and interpretable combinations of binary predictors using logic regression trees to model complex relationships with an outcome. Wolf, B.J., Slate, E.H., Hill, E.G. (2010) <doi:10.1093/bioinformatics/btq354>.

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