A streamgraph is a type of stacked area chart. It represents the evolution of a numeric variable for several groups. Areas are usually displayed around a central axis, and edges are rounded to give a flowing shape. This package provides an htmlwidget for building streamgraph visualizations.

This package provides an interface to the C code for Latent Dirichlet Allocation (LDA) models and Correlated Topics Models (CTM) by David M. Blei and co-authors and the C++ code for fitting LDA models using Gibbs sampling by Xuan-Hieu Phan and co-authors.

This R package provides functions to create formattable vectors and data frames. Formattable vectors are printed with text formatting, and formattable data frames are printed with multiple types of formatting in HTML to improve the readability of data presented in tabular form rendered in web pages.

This library contains a helper library for inspecting and setting the various timestamps of files in Rust. This library takes into account cross-platform differences in terms of where the timestamps are located, what they are called, and how to convert them into a platform-independent representation.

This library contains a helper library for inspecting and setting the various timestamps of files in Rust. This library takes into account cross-platform differences in terms of where the timestamps are located, what they are called, and how to convert them into a platform-independent representation.

This package provides a library to help interacting with cache directories and CACHEDIR.TAG files as defined by the Cache Directory Tagging Specification. This library comes with functionality to, among others, add a tag, ensure/check a tag exists and get the state of a tag.

Pinentry-rofi is a simple graphical user interface for passphrase or PIN when required by gpg or other software. It is using the Rofi application launcher as the user interface. Which makes it combined with rofi-pass a good front end for password-store.

cl-rmath is a simple, autogenerated foreign interface for the standalone R API libRmath. There has been no effort to provide a high-level interface for the original library, instead, this library is meant to serve as a building block for such an interface.

This package provides methods to estimate optimal dynamic treatment regimes using Bayesian likelihood-based regression approach as described in Yu, W., & Bondell, H. D. (2023) <doi:10.1093/jrsssb/qkad016> Uses backward induction and dynamic programming theory for computing expected values. Offers options for future parallel computing.

Fiducial framework to perform inference on the quantiles for a generalized Pareto distribution model and on the parameters of the Pareto exceedance distribution, assuming the exceedance threshold is a known or unknown parameter. Reference: Damian V. Wandler & Jan Hannig (2012) <doi:10.1007/s10687-011-0127-9>.

Gene selection based on variance using the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions. Please see the reference: Li X, Fu Y, Wang X, DeMeo DL, Tantisira K, Weiss ST, Qiu W. (2018) <doi:10.1155/2018/6591634>.

Play and record games of minesweeper using a graphics device that supports event handling. Replay recorded games and save GIF animations of them. Based on classic minesweeper as detailed by Crow P. (1997) <https://minesweepergame.com/math/a-mathematical-introduction-to-the-game-of-minesweeper-1997.pdf>.

Create and customize interactive phylogenetic trees using the phylocanvas JavaScript library and the htmlwidgets package. These trees can be used directly from the R console, from RStudio', in Shiny apps, and in R Markdown documents. See <http://phylocanvas.org/> for more information on the phylocanvas library.

When working across multiple machines and, similarly for reproducible research, it can be time consuming to ensure that you have all of the needed packages installed and loaded and that the correct working directory is set. simpleSetup provides simple functions for making these tasks more straightforward.

Transport theory has seen much success in many fields of statistics and machine learning. We provide a variety of algorithms to compute Wasserstein distance, barycenter, and others. See Peyré and Cuturi (2019) <doi:10.1561/2200000073> for the general exposition to the study of computational optimal transport.

Evaluation of prediction performance of smaller regions of spectra for Chemometrics. Segmentation of spectra, evolving dimensions regions and sliding windows as selection methods. Election of the best model among those computed based on error metrics. Chen et al.(2017) <doi:10.1007/s00216-017-0218-9>.

This package provides a collection of tools to streamline the process of fitting elastic net models with glmnet. In addition to providing a formula interface, it also features a function cva.glmnet to do crossvalidation for both α and λ, as well as some utility functions.

This package provides sparse vectors powered by ALTREP (Alternative Representations for R Objects) that behave like regular vectors, and can thus be used in data frames. It also provides tools to convert between sparse matrices and data frames with sparse columns and functions to interact with sparse vectors.

This package provides a normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction.

This package provides a simple library for animation in Rust. It's features include:

1. Several easing functions, including user-defined Bézier curves and keyframable curves.

2. Animation sequences (like CSS keyframes).

3. mint integration for 2D/3D/4D support (points, rectangles, colors, etc).

This is a Rust library that allows you to determine the locations of configuration, data, cache & other files for your application. Existing Rust libraries generally do not give you a choice in terms of which standards/conventions they follow. Etcetera, on the other hand, gives you the choice.

RealGUD is a modular, extensible GNU Emacs front-end for interacting with external debuggers. It integrates various debuggers such as gdb, pdb, ipdb, jdb, lldb, bashdb, zshdb, etc. and allows visually steping through code in the sources. Unlike GUD, it also supports running multiple debug sessions in parallel.

Mustache is a framework-agnostic way to render logic-free views. Think of Mustache as a replacement for your views. Instead of views consisting of ERB or HAML with random helpers and arbitrary logic, your views are broken into two parts: a Ruby class and an HTML template.

The cane gem provides a great framework for running quality checks over your ruby project as part of continuous integration build. It comes with a few checks out of the box, but also provides an API for loading custom checks. This gem provides a set of additional checks.