This package provides a collection of cardiovascular research datasets and analytical tools, including methods for cardiovascular procedural data, such as electrocardiography, echocardiography, and catheterization data. Additional methods exist for analysis of procedural billing codes.
Implement weighted higher-order initialization and angle-based iteration for multi-way spherical clustering under degree-corrected tensor block model. See reference Jiaxin Hu and Miaoyan Wang (2023) <doi:10.1109/TIT.2023.3239521>.
Smooth testing of goodness of fit. These tests are data driven (alternative hypothesis is dynamically selected based on data). In this package you will find various tests for exponent, Gaussian, Gumbel and uniform distribution.
This package provides a key-value dictionary data structure based on R6 class which is designed to be similar usages with other languages dictionary (e.g. Python') with reference semantics and extendabilities by R6.
Implementation of the Density Ratio Permutation Test for testing the goodness-of-fit of a hypothesised ratio of two densities, as described in Bordino and Berrett (2025) <doi:10.48550/arXiv.2505.24529>.
Visualize as flow diagrams the logic of functions, expressions or scripts in a static way or when running a call, visualize the dependencies between functions or between modules in a shiny app, and more.
Validate function arguments succinctly with informative error messages and optional automatic type casting and size recycling. Enable schema-based assertions by attaching reusable rules to data.frame and list objects for use throughout workflows.
This package provides tools for downloading and analyzing floristic quality assessment data. See Freyman et al. (2015) <doi:10.1111/2041-210X.12491> for more information about floristic quality assessment and the associated database.
Routines for log-linear models of incomplete contingency tables, including some latent class models, via EM and Fisher scoring approaches. Allows bootstrapping. See Espeland and Hui (1987) <doi:10.2307/2531553> for general approach.
Robust multiple or multivariate linear regression, nonparametric regression on orthogonal components, classical or robust partial least squares models as described in Bilodeau, Lafaye De Micheaux and Mahdi (2015) <doi:10.18637/jss.v065.i01>.
This package provides a set of routines to quickly download and import the HUGO Gene Nomenclature Committee (HGNC) data set on mapping of gene symbols to gene entries in other genomic databases or resources.
Estimation of high-dimensional multi-response regression with heterogeneous noises under Heterogeneous group square-root Lasso penalty. For details see: Ren, Z., Kang, Y., Fan, Y. and Lv, J. (2018)<arXiv:1606.03803>.
This package provides methods for implementing hierarchical age length keys to estimate fish ages from lengths using data borrowing. Users can create hierarchical age length keys and use them to assign ages given length.
Generalised linear models via the iteratively reweighted least squares algorithm. The functions perform logistic, Poisson and Gamma regression (ISBN:9780412317606), either for a single model or many regression models in a column-wise fashion.
This package provides a collection of personal helper functions to avoid redundancy in the spirit of the "Don't repeat yourself" principle of software development (<https://en.wikipedia.org/wiki/Don%27t_repeat_yourself>).
Modeling microstructures of human tooth dentin and horizontal serial-sectioning of the dentin. Corresponding age range of dentin serial sections, that is used in stable isotope analyses, can be calculated by using this package.
Do multilevel mediation analysis with generalized additive multilevel models. The analysis method is described in Yu and Li (2020), "Third-Variable Effect Analysis with Multilevel Additive Models", PLoS ONE 15(10): e0241072.
Colour palettes for data, based on some well known public data sets. Includes helper functions to map absolute values to known palettes, and capture the work of image colour mapping as raster data sets.
Simulation functions to assess or explore the power of a dataset to estimates significant random effects (intercept or slope) in a mixed model. The functions are based on the "lme4" and "lmerTest" packages.
This package provides functions for coarse-to-fine spatial modeling (CFSM), enabling fast spatial prediction, regression, and uncertainty quantification. For further details, see Murakami et al. (2025) <doi:10.48550/arXiv.2510.00968>.
Thematic maps are geographical maps in which spatial data distributions are visualized. This package offers a flexible, layer-based, and easy to use approach to create thematic maps, such as choropleths and bubble maps.
This package provides a shiny based interactive exploration framework for analyzing clinical trials data. teal currently provides a dynamic filtering facility and different data viewers. teal shiny applications are built using standard shiny modules.
This package provides a Text mining toolkit for Chinese, which includes facilities for Chinese string processing, Chinese NLP supporting, encoding detecting and converting. Moreover, it provides some functions to support tm package in Chinese.
Downloading, customizing, and processing time series of satellite images for a region of interest. rsat functions allow a unified access to multispectral images from Landsat, MODIS and Sentinel repositories. rsat also offers capabilities for customizing satellite images, such as tile mosaicking, image cropping and new variables computation. Finally, rsat covers the processing, including cloud masking, compositing and gap-filling/smoothing time series of images (Militino et al., 2018 <doi:10.3390/rs10030398> and Militino et al., 2019 <doi:10.1109/TGRS.2019.2904193>).