Rspamd is a spam filter that evaluates email messages by a number of rules including: regular expressions, statistical analysis, and URL blacklists. Rspamd gives each message a spam score, e.g., for further processing by an MTA.

Reaver performs a brute force attack against an access point's Wi-Fi Protected Setup (WPS) PIN. Once the PIN is found, the WPA passphrase can be recovered and the AP's wireless settings can be reconfigured.

Argument parsing for R scripts, with support for long and short Unix-style options including option clustering, positional arguments including those of variable length, and multiple usage patterns which may take different subsets of options.

Bayesian Additive Regression Trees (BART) provide flexible nonparametric modeling of covariates for continuous, binary, categorical and time-to-event outcomes. For more information see Sparapani, Spanbauer and McCulloch <doi:10.18637/jss.v097.i01>.

It submits R code/R scripts/shell commands to LSF cluster (<https://en.wikipedia.org/wiki/Platform_LSF>, the bsub system) without leaving R. There is also an interactive shiny application for monitoring job status.

Calculation of various common and less common comfort indices such as predicted mean vote or the two node model. Converts physical variables such as relative to absolute humidity and evaluates the performance of comfort indices.

Uses monotonically constrained Cubic Bezier Splines (CBS) to approximate latent utility functions in intertemporal choice and risky choice data. For more information, see Lee, Glaze, Bradlow, and Kable <doi:10.1007/s11336-020-09723-4>.

First using dada2 R tools to analyse metabarcode data, the DBTC package then uses the BLAST algorithm to search unknown sequences against local databases, and then takes reduced matched results and provides best taxonomic assignments.

This package creates interactive genome browser. It joins the data analysis power of R and the visualization libraries of JavaScript in one package. Barrios, D. & Prieto, C. (2017) <doi:10.1089/cmb.2016.0213>.

Tool for Environment-Wide Association Studies (EnvWAS / EWAS) which are repeated analysis. It includes three functions. One function for linear regression, a second for logistic regression and a last one for generalized linear models.

Find optimal decisions rules for guiding progression decisions following a pilot trial, assuming a hierarchical recruitment model. Estimate the time until the main trial recruits to target, given the recruitment data observed in the pilot.

Server implementation of GraphQL <http://spec.graphql.org/>, a query language originally created by Facebook for describing data requirements on complex application data models. Visit <https://graphql.org> to learn more about GraphQL'.

This package provides functions for estimating a generalized partial linear model, a semiparametric variant of the generalized linear model (GLM) which replaces the linear predictor by the sum of a linear and a nonparametric function.

Fits generalized linear models using the same model specification as glm in the stats package, but with a modified default fitting method that provides greater stability for models that may fail to converge using glm.

Many useful functions and extensions for dealing with meteorological data in the tidy data framework. Extends ggplot2 for better plotting of scalar and vector fields and provides commonly used analysis methods in the atmospheric sciences.

Useful functions to analyze proteomic workflows including number of identifications, data completeness, missed cleavages, quantitative and retention time precision etc. Various software outputs are supported such as ProteomeDiscoverer', Spectronaut', DIA-NN and MaxQuant'.

You can use the set of wrappers for analytical schemata to reduce the effort in writing machine-readable data. The set of all-in-one wrappers will cover widely used functions from data analysis packages.

This package provides a wrapper for the OpenTripPlanner <http://www.opentripplanner.org/> REST API. Queries are submitted to the relevant OpenTripPlanner API resource, the response is parsed and useful R objects are returned.

This package provides a function PWI() that calculates prize winner indices based on bibliometric data is provided. The default is the Derek de Solla Price Memorial Medal'. Users can provide recipients of other prizes.

Generates a position balanced or nearly position balanced block design with given parameters. This package can also convert a given proper and equireplicate block design into a position balanced or nearly position balanced block design.

This package provides digital tools for performing analyses within Social Dynamics and complexity in the Ancient Mediterranean (SDAM), which is a research group based at the Department of History and Classical Studies at Aarhus University.

Takea Semantic Structure Analysis (TSSA) and Sakai Sequential Relation Analysis (SSRA) for polytomous items. Package includes functions for generating a sequential relation table and a treegram to visualize the sequential relations between pairs of items.

Used to construct the URLs and parameters of Socrata Open Data API <https://dev.socrata.com> calls, using the API's SoQL parameter format. Has method-chained and sensical syntax. Plays well with pipes.

Fits linear regression models on datasets residing in SQL databases without pulling data into R memory. Computes sufficient statistics inside the database engine via a single aggregation query and solves the normal equations in R.