r-compounddb 1.16.0
Propagated dependencies: r-xml2@1.5.2 r-tibble@3.3.1 r-stringi@1.8.7 r-spectra@1.22.0 r-s4vectors@0.50.1 r-rsqlite@3.52.0 r-protgenerics@1.44.0 r-mscoreutils@1.24.0 r-metabocoreutils@1.20.1 r-jsonlite@2.0.0 r-iranges@2.46.0 r-dplyr@1.2.1 r-dbplyr@2.5.2 r-dbi@1.3.0 r-data-table@1.18.4 r-chemminer@3.64.0 r-biocparallel@1.46.0 r-biocgenerics@0.58.1 r-biobase@2.72.0 r-annotationfilter@1.36.0
Channel: guix-bioc
Licenses: Artistic License 2.0
Build system: r
Synopsis: Creating and Using (Chemical) Compound Annotation Databases
Description:
CompoundDb provides functionality to create and use (chemical) compound annotation databases from a variety of different sources such as LipidMaps, HMDB, ChEBI or MassBank. The database format allows to store in addition MS/MS spectra along with compound information. The package provides also a backend for Bioconductor's Spectra package and allows thus to match experimetal MS/MS spectra against MS/MS spectra in the database. Databases can be stored in SQLite format and are thus portable.
Total packages: 1