r-ddd 5.2.2
Propagated dependencies: r-subplex@1.9 r-sparsem@1.84-2 r-rcppeigen@0.3.4.0.2 r-rcpp@1.0.13-1 r-phytools@2.4-4 r-matrix@1.7-1 r-expm@1.0-0 r-desolve@1.40 r-deoptim@2.2-8 r-bh@1.84.0-0 r-ape@5.8
Channel: guix-cran
Home page: https://cran.r-project.org/package=DDD
Licenses: GPL 3
Synopsis: Diversity-Dependent Diversification
Description:
This package implements maximum likelihood and bootstrap methods based on the diversity-dependent birth-death process to test whether speciation or extinction are diversity-dependent, under various models including various types of key innovations. See Etienne et al. 2012, Proc. Roy. Soc. B 279: 1300-1309, <DOI:10.1098/rspb.2011.1439>, Etienne & Haegeman 2012, Am. Nat. 180: E75-E89, <DOI:10.1086/667574>, Etienne et al. 2016. Meth. Ecol. Evol. 7: 1092-1099, <DOI:10.1111/2041-210X.12565> and Laudanno et al. 2021. Syst. Biol. 70: 389รข 407, <DOI:10.1093/sysbio/syaa048>. Also contains functions to simulate the diversity-dependent process.
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