r-genetonic 3.0.0
Propagated dependencies: r-visnetwork@2.1.2 r-viridis@0.6.5 r-tippy@0.1.0 r-tidyr@1.3.1 r-summarizedexperiment@1.36.0 r-shinywidgets@0.9.0 r-shinycssloaders@1.1.0 r-shinyace@0.4.3 r-shiny@1.8.1 r-scales@1.3.0 r-s4vectors@0.44.0 r-rmarkdown@2.29 r-rlang@1.1.4 r-rintrojs@0.3.4 r-rcolorbrewer@1.1-3 r-plotly@4.10.4 r-mosdef@1.2.0 r-matrixstats@1.4.1 r-igraph@2.1.1 r-go-db@3.20.0 r-ggridges@0.5.6 r-ggrepel@0.9.6 r-ggplot2@3.5.1 r-ggforce@0.4.2 r-expm@1.0-0 r-dynamictreecut@1.63-1 r-dt@0.33 r-dplyr@1.1.4 r-deseq2@1.46.0 r-dendextend@1.18.1 r-complexupset@1.3.3 r-complexheatmap@2.22.0 r-colourpicker@1.3.0 r-colorspace@2.1-1 r-circlize@0.4.16 r-bs4dash@2.3.4 r-backbone@2.1.4 r-annotationdbi@1.68.0
Channel: guix-bioc
Home page: https://github.com/federicomarini/GeneTonic
Licenses: Expat
Synopsis: Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional Enrichment Analysis
Description:
This package provides functionality to combine the existing pieces of the transcriptome data and results, making it easier to generate insightful observations and hypothesis. Its usage is made easy with a Shiny application, combining the benefits of interactivity and reproducibility e.g. by capturing the features and gene sets of interest highlighted during the live session, and creating an HTML report as an artifact where text, code, and output coexist. Using the GeneTonicList as a standardized container for all the required components, it is possible to simplify the generation of multiple visualizations and summaries.
Total results: 1