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r-ibdfindr 0.3.1
Propagated dependencies: r-ribd@1.7.1 r-pedtools@2.9.0 r-ibdsim2@2.3.2 r-ggplot2@4.0.1 r-forrel@1.8.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/magnusdv/ibdfindr
Licenses: GPL 3+
Synopsis: HMM Toolkit for Inferring IBD Segments from SNP Genotypes
Description:

This package implements continuous-time hidden Markov models (HMMs) to infer identity-by-descent (IBD) segments shared by two individuals from their single-nucleotide polymorphism (SNP) genotypes. Provides posterior probabilities at each marker (forward-backward algorithm), prediction of IBD segments (Viterbi algorithm), and functions for visualising results. Supports both autosomal data and X-chromosomal data.

Total results: 1