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r-jointseg 1.0.2
Propagated dependencies: r-matrixstats@1.4.1 r-dnacopy@1.80.0 r-acnr@1.0.0
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/mpierrejean/jointseg
Licenses: LGPL 2.1+
Synopsis: Joint Segmentation of Multivariate (Copy Number) Signals
Description:

This package provides methods for fast segmentation of multivariate signals into piecewise constant profiles and for generating realistic copy-number profiles. A typical application is the joint segmentation of total DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, Rigaill and Neuvial (2015) <doi:10.1093/bib/bbu026>.

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