r-mia 1.14.0
Propagated dependencies: r-ape@5.8 r-biocgenerics@0.52.0 r-biocparallel@1.40.0 r-biostrings@2.74.0 r-bluster@1.16.0 r-decipher@3.2.0 r-decontam@1.26.0 r-delayedarray@0.32.0 r-delayedmatrixstats@1.28.0 r-dirichletmultinomial@1.48.0 r-dplyr@1.1.4 r-iranges@2.40.0 r-mass@7.3-61 r-matrixgenerics@1.18.0 r-mediation@4.5.0 r-multiassayexperiment@1.32.0 r-rbiom@1.0.3 r-rlang@1.1.4 r-s4vectors@0.44.0 r-scater@1.34.0 r-scuttle@1.16.0 r-singlecellexperiment@1.28.1 r-summarizedexperiment@1.36.0 r-tibble@3.2.1 r-tidyr@1.3.1 r-treesummarizedexperiment@2.14.0 r-vegan@2.6-8
Channel: guix
Home page: https://github.com/microbiome/mia
Licenses: Artistic License 2.0
Synopsis: Microbiome analysis
Description:
The mia package implements tools for microbiome analysis based on the SummarizedExperiment
, SingleCellExperiment
and TreeSummarizedExperiment
infrastructure. Data wrangling and analysis in the context of taxonomic data is the main scope. Additional functions for common task are implemented such as community indices calculation and summarization.
Total results: 5