r-monocle3 1.3.7-1.98402ed
Propagated dependencies: r-assertthat@0.2.1 r-batchelor@1.22.0 r-biobase@2.66.0 r-biocgenerics@0.52.0 r-biocparallel@1.40.0 r-delayedarray@0.32.0 r-delayedmatrixstats@1.28.0 r-digest@0.6.37 r-dplyr@1.1.4 r-future@1.34.0 r-ggplot2@3.5.1 r-ggrastr@1.0.2 r-ggrepel@0.9.6 r-grr@0.9.5 r-hdf5array@1.34.0 r-igraph@2.1.1 r-irlba@2.3.5.1 r-leidenbase@0.1.9-1.a11b845 r-limma@3.62.1 r-lme4@1.1-35.5 r-lmtest@0.9-40 r-mass@7.3-61 r-matrix@1.7-1 r-openssl@2.2.2 r-pbapply@1.7-2 r-pbmcapply@1.5.1 r-pheatmap@1.0.12 r-plotly@4.10.4 r-plyr@1.8.9 r-proxy@0.4-27 r-pscl@1.5.9 r-purrr@1.0.2 r-rann@2.6.2 r-rcolorbrewer@1.1-3 r-rcpp@1.0.13-1 r-rcppannoy@0.0.22 r-rcpphnsw@0.6.0 r-reshape2@1.4.4 r-rhpcblasctl@0.23-42 r-rsample@1.2.1 r-rtsne@0.17 r-s4vectors@0.44.0 r-sf@1.0-19 r-shiny@1.8.1 r-singlecellexperiment@1.28.1 r-slam@0.1-55 r-spdep@1.3-6 r-speedglm@0.3-5 r-stringr@1.5.1 r-summarizedexperiment@1.36.0 r-tibble@3.2.1 r-tidyr@1.3.1 r-uwot@0.2.2 r-viridis@0.6.5
Channel: guix
Licenses: Expat
Synopsis: Analysis toolkit for single-cell RNA-Seq data
Description:
Monocle 3 performs clustering, differential expression and trajectory analysis for single-cell expression experiments. It orders individual cells according to progress through a biological process, without knowing ahead of time which genes define progress through that process. Monocle 3 also performs differential expression analysis, clustering, visualization, and other useful tasks on single-cell expression data. It is designed to work with RNA-Seq data, but could be used with other types as well.
Total results: 1