r-saturn 1.14.0
Propagated dependencies: r-biocparallel@1.40.0 r-boot@1.3-31 r-ggplot2@3.5.1 r-limma@3.62.1 r-locfdr@1.1-8 r-matrix@1.7-1 r-pbapply@1.7-2 r-summarizedexperiment@1.36.0
Channel: guix
Home page: https://github.com/statOmics/satuRn
Licenses: Artistic License 2.0
Synopsis: Analysis of differential transcript usage for scRNA-seq applications
Description:
satuRn provides a framework for performing differential transcript usage analyses. The package consists of three main functions. The first function, fitDTU
, fits quasi-binomial generalized linear models that model transcript usage in different groups of interest. The second function, testDTU
, tests for differential usage of transcripts between groups of interest. Finally, plotDTU
visualizes the usage profiles of transcripts in groups of interest.
Total results: 3