r-sctransform 0.4.1
Propagated dependencies: r-dplyr@1.1.4 r-future@1.34.0 r-future-apply@1.11.3 r-ggplot2@3.5.1 r-gridextra@2.3 r-magrittr@2.0.3 r-mass@7.3-61 r-matrix@1.7-1 r-matrixstats@1.4.1 r-rcpp@1.0.13-1 r-rcpparmadillo@14.0.2-1 r-reshape2@1.4.4 r-rlang@1.1.4
Channel: guix
Home page: https://github.com/ChristophH/sctransform
Licenses: GPL 3
Synopsis: Variance stabilizing transformations for Single Cell UMI Data
Description:
This package provides a normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction.
Total results: 1