r-sctransform 0.4.3
Propagated dependencies: r-dplyr@1.2.1 r-future@1.70.0 r-future-apply@1.20.2 r-ggplot2@4.0.3 r-gridextra@2.3 r-magrittr@2.0.5 r-mass@7.3-65 r-matrix@1.7-5 r-matrixstats@1.5.0 r-parallelly@1.47.0 r-rcpp@1.1.1-1.1 r-rcpparmadillo@15.2.6-1 r-reshape2@1.4.5 r-rlang@1.2.0
Channel: guix
Home page: https://github.com/ChristophH/sctransform
Licenses: GPL 3
Build system: r
Synopsis: Variance stabilizing transformations for Single Cell UMI Data
Description:
This package provides a normalization method for single-cell UMI count data using a variance stabilizing transformation. The transformation is based on a negative binomial regression model with regularized parameters. As part of the same regression framework, this package also provides functions for batch correction, and data correction.
Total packages: 1