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r-sipsic 1.12.0
Propagated dependencies: r-singlecellexperiment@1.32.0 r-matrix@1.7-4
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://www.genome.org/cgi/doi/10.1101/gr.278431.123
Licenses: FSDG-compatible
Build system: r
Synopsis: Calculate Pathway Scores for Each Cell in scRNA-Seq Data
Description:

Infer biological pathway activity of cells from single-cell RNA-sequencing data by calculating a pathway score for each cell (pathway genes are specified by the user). It is recommended to have the data in Transcripts-Per-Million (TPM) or Counts-Per-Million (CPM) units for best results. Scores may change when adding cells to or removing cells off the data. SiPSiC stands for Single Pathway analysis in Single Cells.

Total packages: 1