r-tidysinglecellexperiment 1.22.0
Propagated dependencies: r-vctrs@0.7.3 r-ttservice@0.5.3 r-tidyselect@1.2.1 r-tidyr@1.3.2 r-tibble@3.3.1 r-summarizedexperiment@1.42.0 r-stringr@1.6.0 r-singlecellexperiment@1.34.0 r-s4vectors@0.50.1 r-rlang@1.2.0 r-purrr@1.2.2 r-pkgconfig@2.0.3 r-pillar@1.11.1 r-matrix@1.7-5 r-magrittr@2.0.5 r-lifecycle@1.0.5 r-ggplot2@4.0.3 r-fansi@1.0.7 r-ellipsis@0.3.3 r-dplyr@1.2.1 r-cli@3.6.6
Channel: guix-bioc
Licenses: GPL 3
Build system: r
Synopsis: Brings SingleCellExperiment to the Tidyverse
Description:
tidySingleCellExperiment is an adapter that abstracts the SingleCellExperiment container in the form of a tibble'. This allows *tidy* data manipulation, nesting, and plotting. For example, a tidySingleCellExperiment is directly compatible with functions from tidyverse packages `dplyr` and `tidyr`, as well as plotting with `ggplot2` and `plotly`. In addition, the package provides various utility functions specific to single-cell omics data analysis (e.g., aggregation of cell-level data to pseudobulks).
Total packages: 1