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rsem 1.3.3
Dependencies: bash-minimal@5.2.37 boost@1.83.0 r-minimal@4.5.0 perl@5.36.0 htslib@1.3.1 zlib@1.3.1
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://deweylab.biostat.wisc.edu/rsem/
Licenses: GPL 3+
Synopsis: Estimate gene expression levels from RNA-Seq data
Description:

RSEM is a software package for estimating gene and isoform expression levels from RNA-Seq data. The RSEM package provides a user-friendly interface, supports threads for parallel computation of the EM algorithm, single-end and paired-end read data, quality scores, variable-length reads and RSPD estimation. In addition, it provides posterior mean and 95% credibility interval estimates for expression levels. For visualization, it can generate BAM and Wiggle files in both transcript-coordinate and genomic-coordinate.

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