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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
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  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-hirisplexr 0.1.0
Propagated dependencies: r-data-table@1.17.8 r-bedmatrix@2.0.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/adhikari-statgen-lab/hirisplexr
Licenses: Expat
Build system: r
Synopsis: From 'PLINK' to 'HIrisPlex'
Description:

Read PLINK 1.9 binary datasets (BED/BIM/FAM) and generate the CSV files required by the Erasmus MC HIrisPlex / HIrisPlex-S webtool <https://hirisplex.erasmusmc.nl/>. It maps PLINK alleles to the webtool's required rsID_Allele columns (0/1/2/NA). No external tools (e.g., PLINK CLI') are required.

r-hpackedbubble 0.1.0
Propagated dependencies: r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/czxa/hpackedbubble
Licenses: Expat
Build system: r
Synopsis: Create Split Packed Bubble Charts
Description:

By binding R functions and the Highcharts <http://www.highcharts.com/> charting library, hpackedbubble package provides a simple way to draw split packed bubble charts.

r-haplin 7.3.2
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://haplin.bitbucket.io
Licenses: GPL 2+
Build system: r
Synopsis: Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
Description:

This package performs genetic association analyses of case-parent triad (trio) data with multiple markers. It can also incorporate complete or incomplete control triads, for instance independent control children. Estimation is based on haplotypes, for instance SNP haplotypes, even though phase is not known from the genetic data. Haplin estimates relative risk (RR + conf.int.) and p-value associated with each haplotype. It uses maximum likelihood estimation to make optimal use of data from triads with missing genotypic data, for instance if some SNPs has not been typed for some individuals. Haplin also allows estimation of effects of maternal haplotypes and parent-of-origin effects, particularly appropriate in perinatal epidemiology. Haplin allows special models, like X-inactivation, to be fitted on the X-chromosome. A GxE analysis allows testing interactions between environment and all estimated genetic effects. The models were originally described in "Gjessing HK and Lie RT. Case-parent triads: Estimating single- and double-dose effects of fetal and maternal disease gene haplotypes. Annals of Human Genetics (2006) 70, pp. 382-396".

r-httkexamples 0.0.1
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://chemicalinsights.ul.org/
Licenses: Expat
Build system: r
Synopsis: High-Throughput Toxicokinetics Examples
Description:

High throughput toxicokinetics ("HTTK") is the combination of 1) chemical-specific in vitro measurements or in silico predictions and 2) generic mathematical models, to predict absorption, distribution, metabolism, and excretion by the body. HTTK methods have been described by Pearce et al. (2017) (<doi:10.18637/jss.v079.i04>) and Breen et al. (2021) (<doi:10.1080/17425255.2021.1935867>). Here we provide examples (vignettes) applying HTTK to solve various problems in bioinformatics, toxicology, and exposure science. In accordance with Davidson-Fritz et al. (2025) (<doi:10.1371/journal.pone.0321321>), whenever a new HTTK model is developed, the code to generate the figures evaluating that model is added as a new vignettte.

r-httping 0.3.0
Propagated dependencies: r-magrittr@2.0.4 r-lobstr@1.1.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-httpcode@0.3.0
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/sckott/httping
Licenses: Expat
Build system: r
Synopsis: 'Ping' 'URLs' to Time 'Requests'
Description:

This package provides a suite of functions to ping URLs and to time HTTP requests'. Designed to work with httr'.

r-harbinger 1.2.767
Propagated dependencies: r-zoo@1.8-14 r-wavelets@0.3-0.2 r-tspredit@1.2.767 r-tsmp@0.4.16 r-strucchange@1.5-4 r-stringr@1.6.0 r-rugarch@1.5-4 r-rcpphungarian@0.3 r-hht@2.1.6 r-ggplot2@4.0.1 r-forecast@8.24.0 r-dtwclust@6.0.0 r-dplyr@1.1.4 r-daltoolbox@1.3.717 r-changepoint@2.3
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cefet-rj-dal.github.io/harbinger/
Licenses: Expat
Build system: r
Synopsis: Unified Time Series Event Detection Framework
Description:

By analyzing time series, it is possible to observe significant changes in the behavior of observations that frequently characterize events. Events present themselves as anomalies, change points, or motifs. In the literature, there are several methods for detecting events. However, searching for a suitable time series method is a complex task, especially considering that the nature of events is often unknown. This work presents Harbinger, a framework for integrating and analyzing event detection methods. Harbinger contains several state-of-the-art methods described in Salles et al. (2020) <doi:10.5753/sbbd.2020.13626>.

r-hmer 1.6.2
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/andy-iskauskas/hmer
Licenses: Expat
Build system: r
Synopsis: History Matching and Emulation Package
Description:

This package provides a set of objects and functions for Bayes Linear emulation and history matching. Core functionality includes automated training of emulators to data, diagnostic functions to ensure suitability, and a variety of proposal methods for generating waves of points. For details on the mathematical background, there are many papers available on the topic (see references attached to function help files or the below references); for details of the functions in this package, consult the manual or help files. Iskauskas, A, et al. (2024) <doi:10.18637/jss.v109.i10>. Bower, R.G., Goldstein, M., and Vernon, I. (2010) <doi:10.1214/10-BA524>. Craig, P.S., Goldstein, M., Seheult, A.H., and Smith, J.A. (1997) <doi:10.1007/978-1-4612-2290-3_2>.

r-hgraph 0.1.0
Propagated dependencies: r-knitr@1.50
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=HGraph
Licenses: GPL 2
Build system: r
Synopsis: Use Graph Structure to Travel
Description:

It is used to travel graphs, by using DFS and BFS to get the path from node to each leaf node. Depth first traversal(DFS) is a recursive algorithm for searching all the vertices of a graph or tree data structure. Traversal means visiting all the nodes of a graph. Breadth first traversal(BFS) algorithm is used to search a tree or graph data structure for a node that meets a set of criteria. It starts at the treeâ s root or graph and searches/visits all nodes at the current depth level before moving on to the nodes at the next depth level. Also, it provides the matrix which is reachable between each node. Implement reference about Baruch Awerbuch (1985) <doi:10.1016/0020-0190(85)90083-3>.

r-htseed 0.1.0
Propagated dependencies: r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=HTSeed
Licenses: GPL 3
Build system: r
Synopsis: Fitting of Hydrotime Model for Seed Germination Time Course
Description:

The seed germination process starts with water uptake by the seed and ends with the protrusion of radicle and plumule under varying temperatures and soil water potential. Hydrotime is a way to describe the relationship between water potential and seed germination rates at germination percentages. One important quantity before applying hydrotime modeling of germination percentages is to consider the proportion of viable seeds that could germinate under saturated conditions. This package can be used to apply correction factors at various water potentials before estimating parameters like stress tolerance, and uniformity of the hydrotime model. Three different distributions namely, Gaussian, Logistic, and Extreme value distributions have been considered to fit the model to the seed germination time course. Details can be found in Bradford (2002) <https://www.jstor.org/stable/4046371>, and Bradford and Still(2004) <https://www.jstor.org/stable/23433495>.

r-hwsdr 1.2
Propagated dependencies: r-terra@1.8-86 r-sf@1.0-23 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/bluegreen-labs/hwsdr
Licenses: AGPL 3
Build system: r
Synopsis: Interface to the 'HWSD' Web Services
Description:

Programmatic interface to the Harmonized World Soil Database HWSD web services (<https://daac.ornl.gov/cgi-bin/dsviewer.pl?ds_id=1247>). Allows for easy downloads of HWSD soil data directly to your R workspace or your computer. Routines for both single pixel data downloads and gridded data are provided.

r-hdcuremodels 0.0.6
Propagated dependencies: r-withr@3.0.2 r-survival@3.8-3 r-plyr@1.8.9 r-mvnfast@0.2.8 r-knockoff@0.3.6 r-glmnet@4.1-10 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-foreach@1.5.2 r-flexsurvcure@1.3.3 r-flexsurv@2.3.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/ropensci/hdcuremodels
Licenses: Expat
Build system: r
Synopsis: High-Dimensional Cure Models
Description:

This package provides functions for fitting various penalized parametric and semi-parametric mixture cure models with different penalty functions, testing for a significant cure fraction, and testing for sufficient follow-up as described in Fu et al (2022)<doi:10.1002/sim.9513> and Archer et al (2024)<doi:10.1186/s13045-024-01553-6>. False discovery rate controlled variable selection is provided using model-X knock-offs.

r-htm2txt 2.2.2
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/replicable/htm2txt
Licenses: GPL 2+
Build system: r
Synopsis: Convert Html into Text
Description:

Convert a html document to plain texts by stripping off all html tags.

r-hsaur 1.3-11
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=HSAUR
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Handbook of Statistical Analyses Using R (1st Edition)
Description:

Functions, data sets, analyses and examples from the book A Handbook of Statistical Analyses Using R (Brian S. Everitt and Torsten Hothorn, Chapman & Hall/CRC, 2006). The first chapter of the book, which is entitled An Introduction to R'', is completely included in this package, for all other chapters, a vignette containing all data analyses is available.

r-hessrna 1.0.1
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=HEssRNA
Licenses: GPL 3
Build system: r
Synopsis: Heritability-Based Estimation of Sample Size for RNA-Seq Data
Description:

This package provides tools for estimating sample sizes primarily based on heritability, while also considering additional parameters such as statistical power and fold change. The package normalizes heritability values according to trait-specific heritability and classification to enhance accuracy in sample size estimation.

r-hollr 1.0.0
Propagated dependencies: r-reticulate@1.44.1 r-pbapply@1.7-4 r-jsonlite@2.0.0 r-httr@1.4.7 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/jaytimm/hollr
Licenses: Expat
Build system: r
Synopsis: Chat Completion and Text Annotation with Local and OpenAI Models
Description:

Enables chat completion and text annotation with local and OpenAI <https://openai.com/> language models, supporting batch processing, multiple annotators, and consistent output formats.

r-howler 0.3.0
Propagated dependencies: r-shiny@1.11.1 r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/ashbaldry/howler
Licenses: Expat
Build system: r
Synopsis: 'Shiny' Extension of 'howler.js'
Description:

Audio interactivity within shiny applications using howler.js'. Enables the status of the audio player to be sent from the UI to the server, and events such as playing and pausing the audio can be triggered from the server.

r-hdanova 0.8.4
Propagated dependencies: r-rspectra@0.16-2 r-progress@1.2.3 r-pracma@2.4.6 r-pls@2.8-5 r-mixlm@1.4.3 r-mass@7.3-65 r-lme4@1.1-37 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://khliland.github.io/HDANOVA/
Licenses: GPL 2+
Build system: r
Synopsis: High-Dimensional Analysis of Variance
Description:

This package provides functions and datasets to support Smilde, Marini, Westerhuis and Liland (2025, ISBN: 978-1-394-21121-0) "Analysis of Variance for High-Dimensional Data - Applications in Life, Food and Chemical Sciences". This implements and imports a collection of methods for HD-ANOVA data analysis with common interfaces, result- and plotting functions, multiple real data sets and four vignettes covering a range different applications.

r-haplodiploidequilibrium 0.1.0
Propagated dependencies: r-vcfr@1.15.0 r-matrixstats@1.5.0 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=HaploDiploidEquilibrium
Licenses: GPL 3
Build system: r
Synopsis: Calculate F Statistics Using Mixed Haploid and Diploid Organism Data
Description:

This package provides functions to estimate population genetics summary statistics from haplo-diploid systems, where one sex is haploid and the other diploid (e.g. Hymenoptera insects). It implements a theoretical model assuming equal sex ratio, random mating, no selection, no mutation, and no gene flow, deriving expected genotype frequencies for both sexes under these equilibrium conditions. The package includes windowed calculations (operating over genomic sliding windows from VCF input) for allele and genotype frequencies, the inbreeding coefficient (Fis), pairwise Fst, Nei's H (gene diversity), Watterson's Theta, and sex-specific reference allele frequencies. Most statistics are agnostic to ploidy, allowing the package to be applied to both strictly haplo-diploid and fully diploid systems.

r-hubeau 0.5.2
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://inrae.github.io/hubeau/
Licenses: Expat
Build system: r
Synopsis: Get Data from the French National Database on Water 'Hub'Eau'
Description:

Collection of functions to help retrieving data from Hub'Eau the free and public French National APIs on water <https://hubeau.eaufrance.fr/>.

r-hdbinseg 1.0.3
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=hdbinseg
Licenses: GPL 3+
Build system: r
Synopsis: Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation
Description:

Binary segmentation methods for detecting and estimating multiple change-points in the mean or second-order structure of high-dimensional time series as described in Cho and Fryzlewicz (2014) <doi:10.1111/rssb.12079> and Cho (2016) <doi:10.1214/16-EJS1155>.

r-healthyr-ts 0.3.2
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://www.spsanderson.com/healthyR.ts/
Licenses: Expat
Build system: r
Synopsis: The Time Series Modeling Companion to 'healthyR'
Description:

Hospital time series data analysis workflow tools, modeling, and automations. This library provides many useful tools to review common administrative time series hospital data. Some of these include average length of stay, and readmission rates. The aim is to provide a simple and consistent verb framework that takes the guesswork out of everything.

r-hettest 1.0
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=hettest
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Testing for a Treatment Effect Using a Heterogeneous Surrogate Marker
Description:

Tests for a treatment effect using surrogate marker information accounting for heterogeneity in the utility of the surrogate. Details are described in Parast et al (2022) <arXiv:2209.08315>.

r-hcpclust 0.1.1
Propagated dependencies: r-xgboost@1.7.11.1 r-quantregforest@1.3-7.1 r-quantreg@6.1 r-grf@2.6.1
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/judywangstat/HCP
Licenses: Expat
Build system: r
Synopsis: Hierarchical Conformal Prediction for Clustered Data with Missing Responses
Description:

This package implements hierarchical conformal prediction for clustered data with missing responses. The method uses repeated cluster-level splitting and within-cluster subsampling to accommodate dependence, and inverse-probability weighting to correct distribution shift induced by missingness. Conditional densities are estimated by inverting fitted conditional quantiles (linear quantile regression or quantile regression forests), and p-values are aggregated across resampling and splitting steps using the Cauchy combination test.

r-hrcomprisk 0.1.1
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/AntiportaD/hrcomprisk
Licenses: GPL 3
Build system: r
Synopsis: Nonparametric Assessment Between Competing Risks Hazard Ratios
Description:

Nonparametric cumulative-incidence based estimation of the ratios of sub-hazard ratios to cause-specific hazard ratios using the approach from Ng et al. (2020).

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Total results: 21457