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Radioactive doses estimation using individual chromosomal aberrations information. See Higueras M, Puig P, Ainsbury E, Rothkamm K. (2015) <doi:10.1088/0952-4746/35/3/557>.
Some survey participants tend to respond carelessly which complicates data analysis. This package provides functions that make it easier to explore responses and identify those that may be problematic. See Gottfried et al. (2022) <doi:10.7275/vyxb-gt24> for more information.
This package provides a novel bias-bound approach for non-parametric inference is introduced, focusing on both density and conditional expectation estimation. It constructs valid confidence intervals that account for the presence of a non-negligible bias and thus make it possible to perform inference with optimal mean squared error minimizing bandwidths. This package is based on Schennach (2020) <doi:10.1093/restud/rdz065>.
Build regular expressions piece by piece using human readable code. This package contains date and time functionality, and is primarily intended to be used by package developers.
shiny extension that adds regular expression filtering capabilities to the choice vector of the select list.
Convex Least Squares Programming (CLSP) is a two-step estimator for solving underdetermined, ill-posed, or structurally constrained least-squares problems. It combines pseudoinverse-based estimation with convex-programming correction methods inspired by Lasso, Ridge, and Elastic Net to ensure numerical stability, constraint enforcement, and interpretability. The package also provides numerical stability analysis and CLSP-specific diagnostics, including partial R^2, normalized RMSE (NRMSE), Monte Carlo t-tests for mean NRMSE, and condition-number-based confidence bands.
Simplifies integration with Amazon Cognito (<https://aws.amazon.com/cognito/>) for R developers, enabling easy management of user authentication, registration, and password flows.
This package provides tools for generation of (life-history) traits and diversity maps on hexagonal or square grids. Valcu et al.(2012) <doi:10.1111/j.1466-8238.2011.00739.x>.
This package provides functions to convert an R colour specification to a colour name. The user can select and create different lists of colour names and different colour metrics for the conversion.
Computationally efficient tool for performing variable selection and obtaining robust estimates, which implements robust variable selection procedure proposed by Wang, X., Jiang, Y., Wang, S., Zhang, H. (2013) <doi:10.1080/01621459.2013.766613>. Users can enjoy the near optimal, consistent, and oracle properties of the procedures.
The Radiant Design menu includes interfaces for design of experiments, sampling, and sample size calculation. The application extends the functionality in radiant.data'.
We provide linear and nonlinear dimension reduction techniques. Intrinsic dimension estimation methods for exploratory analysis are also provided. For more details on the package, see the paper by You and Shung (2022) <doi:10.1016/j.simpa.2022.100414>.
The RBP curve is a visual tool to assess the performance of prediction models.
This package provides a methodology to perform multivariate measurement error adjustment using external validation data. Allows users to remove the attenuating effect of measurement error by incorporating a distribution of external validation data, and allows for plotting of all resultant adjustments. Sensitivity analyses can also be run through this package to test how different ranges of validity coefficients can impact the effect of the measurement error adjustment. The methods implemented in this package are based on the work by Muoka, A., Agogo, G., Ngesa, O., Mwambi, H. (2020): <doi:10.12688/f1000research.27892.1>.
Functionality for performing a principled reference analysis in the Bayesian normal-normal hierarchical model used for Bayesian meta-analysis, as described in Ott, Plummer and Roos (2021) <doi:10.1002/sim.9076>. Computes a reference posterior, induced by a minimally informative improper reference prior for the between-study (heterogeneity) standard deviation. Determines additional proper anti-conservative (and conservative) prior benchmarks. Includes functions for reference analyses at both the posterior and the prior level, which, given the data, quantify the informativeness of a heterogeneity prior of interest relative to the minimally informative reference prior and the proper prior benchmarks. The functions operate on data sets which are compatible with the bayesmeta package.
This package provides a resource represents some data or a computation unit. It is described by a URL and credentials. This package proposes a Resource model with "resolver" and "client" classes to facilitate the access and the usage of the resources.
This package performs one-sample t-test based on robustified statistics using median/MAD (TA) and Hodges-Lehmann/Shamos (TB). For more details, see Park and Wang (2018)<arXiv:1807.02215>. This work was partially supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (No. NRF-2017R1A2B4004169).
This package provides efficient functions for detecting multiple change points in multidimensional time series. The models can be piecewise constant or polynomial. Adaptive threshold selection methods are available, see Fan and Wu (2024) <arXiv:2403.00600>.
Supports concordances in R Markdown documents. This currently allows the original source location in the .Rmd file of errors detected by HTML tidy to be found more easily, and potentially allows forward and reverse search in HTML and LaTeX documents produced from R Markdown'. The LaTeX support has been included in the most recent development version of the patchDVI package.
This package provides functions to download and parse robots.txt files. Ultimately the package makes it easy to check if bots (spiders, crawler, scrapers, ...) are allowed to access specific resources on a domain.
R-based access to a large set of data variables relevant to forest ecology in British Columbia (BC), Canada. Layers are in raster format at 100m resolution in the BC Albers projection, hosted at the Federated Research Data Repository (FRDR) with <doi:10.20383/101.0283>. The collection includes: elevation; biogeoclimatic zone; wildfire; cutblocks; forest attributes from Hansen et al. (2013) <doi:10.1139/cjfr-2013-0401> and Beaudoin et al. (2017) <doi:10.1139/cjfr-2017-0184>; and rasterized Forest Insect and Disease Survey (FIDS) maps for a number of insect pest species, all covering the period 2001-2018. Users supply a polygon or point location in the province of BC, and rasterbc will download the overlapping raster tiles hosted at FRDR, merging them as needed and returning the result in R as a SpatRaster object. Metadata associated with these layers, and code for downloading them from their original sources can be found in the github repository <https://github.com/deankoch/rasterbc_src>.
This package provides an accessible and efficient implementation of a randomized feature and bootstrap-enhanced Gaussian naive Bayes classifier. The method combines stratified bootstrap resampling with random feature subsampling and aggregates predictions via posterior averaging. Support is provided for mixed-type predictors and parallel computation. Methods are described in Srisuradetchai (2025) <doi:10.3389/fdata.2025.1706417> "Posterior averaging with Gaussian naive Bayes and the R package RandomGaussianNB for big-data classification".
Estimation of Bayes and local Bayes false discovery rates for replicability analysis (Heller & Yekutieli, 2014 <doi:10.1214/13-AOAS697> ; Heller at al., 2015 <doi: 10.1093/bioinformatics/btu434>).
The aim of the report package is to bridge the gap between RĂ¢ s output and the formatted results contained in your manuscript. This package converts statistical models and data frames into textual reports suited for publication, ensuring standardization and quality in results reporting.