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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-rangemodelmetadata 0.1.5
Propagated dependencies: r-terra@1.8-86 r-spocc@1.2.4 r-shiny@1.11.1 r-bien@1.2.7
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rangeModelMetadata
Licenses: GPL 3+
Build system: r
Synopsis: Provides Templates for Metadata Files Associated with Species Range Models
Description:

Range Modeling Metadata Standards (RMMS) address three challenges: they (i) are designed for convenience to encourage use, (ii) accommodate a wide variety of applications, and (iii) are extensible to allow the community of range modelers to steer it as needed. RMMS are based on a data dictionary that specifies a hierarchical structure to catalog different aspects of the range modeling process. The dictionary balances a constrained, minimalist vocabulary to improve standardization with flexibility for users to provide their own values. Merow et al. (2019) <DOI:10.1111/geb.12993> describe the standards in more detail. Note that users who prefer to use the R package ecospat can obtain it from <https://github.com/ecospat/ecospat>.

r-receptiviti 0.2.1
Propagated dependencies: r-stringi@1.8.7 r-progressr@0.18.0 r-jsonlite@2.0.0 r-digest@0.6.39 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://receptiviti.github.io/receptiviti-r/
Licenses: Expat
Build system: r
Synopsis: Text Analysis Through the 'Receptiviti' API
Description:

Sends texts to the <https://www.receptiviti.com> API to be scored, and facilitates the creation of custom norms and local results databases.

r-rerddapxtracto 1.2.4
Propagated dependencies: r-tibble@3.3.0 r-sp@2.2-0 r-sf@1.0-23 r-rerddap@1.2.2 r-readr@2.1.6 r-plotdap@1.1.1 r-parsedate@1.3.2 r-ncdf4@1.24 r-maps@3.4.3 r-httr@1.4.7 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/rmendels/rerddapXtracto
Licenses: CC0
Build system: r
Synopsis: Extracts Environmental Data from 'ERDDAP™' Web Services
Description:

This package contains three functions that access environmental data from any ERDDAPâ ¢ data web service. The rxtracto() function extracts data along a trajectory for a given "radius" around the point. The rxtracto_3D() function extracts data in a box. The rxtractogon() function extracts data in a polygon. All of those three function use the rerddap package to extract the data, and should work with any ERDDAPâ ¢ server. There are also two functions, plotBBox() and plotTrack() that use the plotdap package to simplify the creation of maps of the data.

r-ripserr 1.0.0
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/tdaverse/ripserr/
Licenses: GPL 3
Build system: r
Synopsis: Calculate Persistent Homology with Ripser-Based Engines
Description:

Ports the Ripser <doi:10.48550/arXiv.1908.02518> and Cubical Ripser <doi:10.48550/arXiv.2005.12692> persistent homology calculation engines from C++. Can be used as a rapid calculation tool in topological data analysis pipelines.

r-rewie 0.1.0
Propagated dependencies: r-rockchalk@1.8.157 r-plm@2.6-7 r-mass@7.3-65 r-lme4@1.1-37
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/sduxbury/rewie
Licenses: GPL 2+
Build system: r
Synopsis: Data Preparation and Diagnostics for Random Effects Within Estimator
Description:

Diagnostics and data preparation for random effects within estimator, random effects within-idiosyncratic estimator, between-within-idiosyncratic model, and cross-classified between model. Mundlak, Yair (1978) <doi:10.2307/1913646>. Hausman, Jeffrey (1978) <doi:10.2307/1913827>. Allison, Paul (2009) <doi:10.4135/9781412993869>. Neuhaus, J.M., and J. D. Kalbfleisch (1998) <doi:10.2307/3109770>.

r-rtms 0.2.0
Propagated dependencies: r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rtms
Licenses: GPL 3+
Build system: r
Synopsis: R Toolkit for Mass Spectrometry
Description:

Quickly imports, processes, analyzes, and visualizes mass-spectrometric data. Includes functions for easily extracting specific data and measurements from large (multi-gigabyte) raw Bruker data files, as well as a set of S3 object classes for manipulating and measuring mass spectrometric peaks and plotting peaks and spectra using the ggplot2 package.

r-rwildbook 0.9.3
Propagated dependencies: r-marked@1.2.8 r-jsonlite@2.0.0 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RWildbook
Licenses: GPL 2+
Build system: r
Synopsis: Interface for the 'Wildbook' Wildlife Data Management Framework
Description:

This package provides an interface with the Wildbook mark-recapture ecological database framework. It helps users to pull data from the Wildbook framework and format data for further analysis with mark-recapture applications like Program MARK (which can be accessed via the RMark package in R'). Further information on the Wildbook framework is available at: <http://www.wildbook.org/doku.php>.

r-rtern 0.1.2
Propagated dependencies: r-rlang@1.1.6
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/grddavies/rtern
Licenses: Expat
Build system: r
Synopsis: Ternary Conditional Operator for R
Description:

This package provides a small language extension for succinct conditional assignment using `?` and `:`, emulating the conditional ternary operator syntax using in C, Java, JavaScript and other languages.

r-reportroc 3.6
Propagated dependencies: r-vcd@1.4-13 r-proc@1.19.0.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=reportROC
Licenses: GPL 3
Build system: r
Synopsis: An Easy Way to Report ROC Analysis
Description:

This package provides an easy way to report the results of ROC analysis, including: 1. an ROC curve. 2. the value of Cutoff, AUC (Area Under Curve), ACC (accuracy), SEN (sensitivity), SPE (specificity), PLR (positive likelihood ratio), NLR (negative likelihood ratio), PPV (positive predictive value), NPV (negative predictive value), PPA (percentage of positive accordance), NPA (percentage of negative accordance), TPA (percentage of total accordance), KAPPA (kappa value).

r-r2mlwin 0.8-10
Propagated dependencies: r-tibble@3.3.0 r-texreg@1.39.5 r-memisc@0.99.31.8.3 r-matrix@1.7-4 r-lattice@0.22-7 r-foreign@0.8-90 r-foreach@1.5.2 r-doparallel@1.0.17 r-digest@0.6.39 r-coda@0.19-4.1 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://www.bristol.ac.uk/cmm/software/r2mlwin/
Licenses: GPL 2+
Build system: r
Synopsis: Running 'MLwiN' from Within R
Description:

An R command interface to the MLwiN multilevel modelling software package.

r-relatable 1.0.0
Propagated dependencies: r-compare@0.2-6
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/domjarkey/relatable
Licenses: Expat
Build system: r
Synopsis: Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations
Description:

This package provides functions to safely map from a vector of keys to a vector of values, determine properties of a given relation, or ensure a relation conforms to a given type, such as many-to-many, one-to-many, injective, surjective, or bijective. Permits default return values for use similar to a vectorised switch statement, as well as safely handling large vectors, NAs, and duplicate mappings.

r-rwc 1.12
Propagated dependencies: r-raster@3.6-32 r-mvtnorm@1.3-3 r-matrix@1.7-4 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rwc
Licenses: GPL 2
Build system: r
Synopsis: Random Walk Covariance Models
Description:

Code to facilitate simulation and inference when connectivity is defined by underlying random walks. Methods for spatially-correlated pairwise distance data are especially considered. This provides core code to conduct analyses similar to that in Hanks and Hooten (2013) <doi:10.1080/01621459.2012.724647>.

r-restimizeapi 1.0.0
Propagated dependencies: r-rjsonio@2.0.0 r-rcurl@1.98-1.17
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://www.r-project.org
Licenses: LGPL 3
Build system: r
Synopsis: Functions for Working with the 'www.estimize.com' Web Services
Description:

This package provides the user with functions to develop their trading strategy, uncover actionable trading ideas, and monitor consensus shifts with crowdsourced earnings and economic estimate data directly from <www.estimize.com>. Further information regarding the web services this package invokes can be found at <www.estimize.com/api>.

r-rpaleoclim 1.1.0
Propagated dependencies: r-terra@1.8-86 r-rlang@1.1.6 r-httr@1.4.7 r-fs@1.6.6 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://rpaleoclim.joeroe.io
Licenses: Expat
Build system: r
Synopsis: Download Paleoclimate Data from 'PaleoClim'
Description:

PaleoClim <http://www.paleoclim.org> (Brown et al. 2019, <doi:10.1038/sdata.2018.254>) is a set of free, high resolution paleoclimate surfaces covering the whole globe. It includes data on surface temperature, precipitation and the standard bioclimatic variables commonly used in ecological modelling, derived from the HadCM3 general circulation model and downscaled to a spatial resolution of up to 2.5 minutes. Simulations are available for key time periods from the Late Holocene to mid-Pliocene. Data on current and Last Glacial Maximum climate is derived from CHELSA (Karger et al. 2017, <doi:10.1038/sdata.2017.122>) and reprocessed by PaleoClim to match their format; it is available at up to 30 seconds resolution. This package provides a simple interface for downloading PaleoClim data in R, with support for caching and filtering retrieved data by period, resolution, and geographic extent.

r-rmlnomogram 0.1.2
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.6.0 r-purrr@1.2.0 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rmlnomogram
Licenses: Expat
Build system: r
Synopsis: Construct Explainable Nomogram for a Machine Learning Model
Description:

Construct an explainable nomogram for a machine learning (ML) model to improve availability of an ML prediction model in addition to a computer application, particularly in a situation where a computer, a mobile phone, an internet connection, or the application accessibility are unreliable. This package enables a nomogram creation for any ML prediction models, which is conventionally limited to only a linear/logistic regression model. This nomogram may indicate the explainability value per feature, e.g., the Shapley additive explanation value, for each individual. However, this package only allows a nomogram creation for a model using categorical without or with single numerical predictors. Detailed methodologies and examples are documented in our vignette, available at <https://htmlpreview.github.io/?https://github.com/herdiantrisufriyana/rmlnomogram/blob/master/doc/ml_nomogram_exemplar.html>.

r-rgenetics 0.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RGenetics
Licenses: GPL 2+
Build system: r
Synopsis: R packages for genetics research
Description:

R packages for genetics research.

r-rfishbc 0.2.7
Propagated dependencies: r-withr@3.0.2 r-tidyr@1.3.1 r-stringr@1.6.0 r-settings@0.2.7 r-rlang@1.1.6 r-readbitmap@0.1.5 r-crayon@1.5.3 r-clisymbols@1.2.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://fishr-core-team.github.io/RFishBC/
Licenses: GPL 3
Build system: r
Synopsis: Back-Calculation of Fish Length
Description:

Helps fisheries scientists collect measurements from calcified structures and back-calculate estimated lengths at previous ages using standard procedures and models. This is intended to replace much of the functionality provided by the now out-dated fishBC software (<https://fisheries.org/bookstore/all-titles/software/70317/>).

r-rpyants 0.0.6
Propagated dependencies: r-rpymat@0.1.8 r-rnifti@1.8.0 r-reticulate@1.44.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://dipterix.org/rpyANTs/
Licenses: ASL 2.0
Build system: r
Synopsis: An Alternative Advanced Normalization Tools ('ANTs')
Description:

This package provides portable access from R to biomedical image processing toolbox ANTs by Avants et al. (2009) <doi:10.54294/uvnhin> via seamless integration with the Python implementation ANTsPy'. Allows biomedical images to be processed in Python and analyzed in R', and vice versa via shared memory. See citation("rpyANTs") for more reference information.

r-rts 1.1-14
Propagated dependencies: r-zoo@1.8-14 r-xts@0.14.1 r-terra@1.8-86 r-rcurl@1.98-1.17 r-raster@3.6-32
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://r-gis.net/
Licenses: GPL 3+
Build system: r
Synopsis: Raster Time Series Analysis
Description:

This framework aims to provide classes and methods for manipulating and processing of raster time series data (e.g. a time series of satellite images).

r-rdssamplesize 0.5.0
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RDSsamplesize
Licenses: GPL 3
Build system: r
Synopsis: RDS Sample Size Estimation and Power Calculation
Description:

This package provides functionality for carrying out sample size estimation and power calculation in Respondent-Driven Sampling.

r-ria 1.7.2
Propagated dependencies: r-oro-nifti@0.11.4 r-oro-dicom@0.5.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://pubmed.ncbi.nlm.nih.gov/29233836/
Licenses: AGPL 3
Build system: r
Synopsis: Radiomics Image Analysis Toolbox for Medial Images
Description:

Radiomics image analysis toolbox for 2D and 3D radiological images. RIA supports DICOM, NIfTI, nrrd and npy (numpy array) file formats. RIA calculates first-order, gray level co-occurrence matrix, gray level run length matrix and geometry-based statistics. Almost all calculations are done using vectorized formulas to optimize run speeds. Calculation of several thousands of parameters only takes minutes on a single core of a conventional PC. Detailed methodology has been published: Kolossvary et al. Circ: Cardiovascular Imaging. 2017;10(12):e006843 <doi: 10.1161/CIRCIMAGING.117.006843>.

r-rd2roxygen 1.18
Propagated dependencies: r-xfun@0.54 r-roxygen2@7.3.3 r-formatr@1.14
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/yihui/Rd2roxygen
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Convert Rd to 'Roxygen' Documentation
Description:

This package provides functions to convert Rd to roxygen documentation. It can parse an Rd file to a list, create the roxygen documentation and update the original R script (e.g. the one containing the definition of the function) accordingly. This package also provides utilities that can help developers build packages using roxygen more easily. The formatR package can be used to reformat the R code in the examples sections so that the code will be more readable.

r-rope 1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rope
Licenses: GPL 3
Build system: r
Synopsis: Model Selection with FDR Control of Selected Variables
Description:

Selects one model with variable selection FDR controlled at a specified level. A q-value for each potential variable is also returned. The input, variable selection counts over many bootstraps for several levels of penalization, is modeled as coming from a beta-binomial mixture distribution.

r-rcrnorm 0.0.2
Propagated dependencies: r-truncnorm@1.0-9
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RCRnorm
Licenses: GPL 2+
Build system: r
Synopsis: An Integrated Regression Model for Normalizing 'NanoString nCounter' Data
Description:

NanoString nCounter is a medium-throughput platform that measures gene or microRNA expression levels. Here is a publication that introduces this platform: Malkov (2009) <doi:10.1186/1756-0500-2-80>. Here is the webpage of NanoString nCounter where you can find detailed information about this platform <https://www.nanostring.com/scientific-content/technology-overview/ncounter-technology>. It has great clinical application, such as diagnosis and prognosis of cancer. Implements integrated system of random-coefficient hierarchical regression model to normalize data from NanoString nCounter platform so that noise from various sources can be removed.

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