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Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-redist 4.3.2
Dependencies: python@3.11.14
Propagated dependencies: r-vctrs@0.6.5 r-tidyselect@1.2.1 r-sys@3.4.3 r-stringr@1.6.0 r-sf@1.0-23 r-servr@0.32 r-rlang@1.1.6 r-redistmetrics@1.0.11 r-rcppthread@2.2.0 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-patchwork@1.3.2 r-ggplot2@4.0.1 r-foreach@1.5.2 r-dplyr@1.1.4 r-dorng@1.8.6.2 r-doparallel@1.0.17 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://alarm-redist.org/redist/
Licenses: GPL 2+
Build system: r
Synopsis: Simulation Methods for Legislative Redistricting
Description:

Enables researchers to sample redistricting plans from a pre-specified target distribution using Sequential Monte Carlo and Markov Chain Monte Carlo algorithms. The package allows for the implementation of various constraints in the redistricting process such as geographic compactness and population parity requirements. Tools for analysis such as computation of various summary statistics and plotting functionality are also included. The package implements the SMC algorithm of McCartan and Imai (2023) <doi:10.1214/23-AOAS1763>, the enumeration algorithm of Fifield, Imai, Kawahara, and Kenny (2020) <doi:10.1080/2330443X.2020.1791773>, the Flip MCMC algorithm of Fifield, Higgins, Imai and Tarr (2020) <doi:10.1080/10618600.2020.1739532>, the Merge-split/Recombination algorithms of Carter et al. (2019) <doi:10.48550/arXiv.1911.01503> and DeFord et al. (2021) <doi:10.1162/99608f92.eb30390f>, and the Short-burst optimization algorithm of Cannon et al. (2020) <doi:10.48550/arXiv.2011.02288>.

r-rtcrbcrr 0.1.1
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-readr@2.1.6 r-magrittr@2.0.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rTCRBCRr
Licenses: Expat
Build system: r
Synopsis: Repertoire Analysis of the Detected Clonotype
Description:

The TRUST4 or MiXCR is used to identify the clonotypes. The goal of rTCRBCRr is to process the results from these clonotyping tools, and analyze the clonotype repertoire metrics based on chain names and IGH isotypes. The manuscript is still under preparation for publication for now. The references describing the methods in this package will be added later.

r-rarecomb 1.1
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.6.0 r-sqldf@0.4-11 r-reshape2@1.4.5 r-pwr@1.3-0 r-magrittr@2.0.4 r-dplyr@1.1.4 r-arules@1.7-11
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RareComb
Licenses: Expat
Build system: r
Synopsis: Combinatorial and Statistical Analyses of Rare Events
Description:

This package provides a custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). Version 1.1 includes a minor adjustment to the number of combinations to be considered for multiple testing correction. This updated version is more conservative in its approach and hence more selective. <doi:10.1101/2021.10.01.462832>.

r-rprojtree 1.0.0
Propagated dependencies: r-rjson@0.2.23 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/miguel-conde/rprojtree
Licenses: GPL 3+
Build system: r
Synopsis: Create Folders and Files Structure for Data Science Projects
Description:

Use JSON templates to create folders and files structure for data science projects. Includes customized templates and accepts your own as JSON files.

r-rhcoclust 2.0.0
Propagated dependencies: r-igraph@2.2.1 r-fields@17.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rhcoclust
Licenses: GPL 2+
Build system: r
Synopsis: Robust Hierarchical Co-Clustering to Identify Significant Co-Cluster
Description:

Here we performs robust hierarchical co-clustering between row and column entities of a data matrix in absence and presence of outlying observations. It can be used to explore important co-clusters consisting of important samples and their regulatory significant features. Please see Hasan, Badsha and Mollah (2020) <doi:10.1101/2020.05.13.094946>.

r-rolocisccnbs 0.1
Propagated dependencies: r-roloc@0.1-2 r-colorspace@2.1-2
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rolocISCCNBS
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation
Description:

This package provides a colour list and colour metric based on the ISCC-NBS System of Color Designation for use with the roloc package for converting colour specifications to colour names.

r-recocrop 0.4-2
Propagated dependencies: r-terra@1.8-86 r-rcpp@1.1.0 r-meteor@0.4-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/cropmodels/Recocrop/
Licenses: GPL 3+
Build system: r
Synopsis: Estimating Environmental Suitability for Plants
Description:

The ecocrop model estimates environmental suitability for plants using a limiting factor approach for plant growth following Hackett (1991) <doi:10.1007/BF00045728>. The implementation in this package is fast and flexible: it allows for the use of any (environmental) predictor variable. Predictors can be either static (for example, soil pH) or dynamic (for example, monthly precipitation).

r-roll 1.2.0
Propagated dependencies: r-rcppparallel@5.1.11-1 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/jasonjfoster/roll
Licenses: GPL 2+
Build system: r
Synopsis: Rolling and Expanding Statistics
Description:

Fast and efficient computation of rolling and expanding statistics for time-series data.

r-rct2 0.0.1
Propagated dependencies: r-sandwich@3.1-1 r-quadprog@1.5-8 r-aer@1.2-15
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/kosukeimai/RCT2
Licenses: GPL 2+
Build system: r
Synopsis: Designing and Analyzing Two-Stage Randomized Experiments
Description:

This package provides various statistical methods for designing and analyzing two-stage randomized controlled trials using the methods developed by Imai, Jiang, and Malani (2021) <doi:10.1080/01621459.2020.1775612> and (2022+) <doi:10.48550/arXiv.2011.07677>. The package enables the estimation of direct and spillover effects, conduct hypotheses tests, and conduct sample size calculation for two-stage randomized controlled trials.

r-ronfig 0.0.8
Propagated dependencies: r-cli@3.6.5 r-carrier@0.3.0.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://timtaylor.codeberg.page/ronfig/
Licenses: GPL 2 GPL 3
Build system: r
Synopsis: Load Configuration Values
Description:

This package provides a simple approach to configuring R projects with different parameter values. Configurations are specified using a reduced subset of base R and parsed accordingly.

r-rmbayes 0.1.16
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.5.0 r-rstan@2.32.7 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/zhengxiaoUVic/rmBayes
Licenses: GPL 3+
Build system: r
Synopsis: Performing Bayesian Inference for Repeated-Measures Designs
Description:

This package provides a Bayesian credible interval is interpreted with respect to posterior probability, and this interpretation is far more intuitive than that of a frequentist confidence interval. However, standard highest-density intervals can be wide due to between-subjects variability and tends to hide within-subject effects, rendering its relationship with the Bayes factor less clear in within-subject (repeated-measures) designs. This urgent issue can be addressed by using within-subject intervals in within-subject designs, which integrate four methods including the Wei-Nathoo-Masson (2023) <doi:10.3758/s13423-023-02295-1>, the Loftus-Masson (1994) <doi:10.3758/BF03210951>, the Nathoo-Kilshaw-Masson (2018) <doi:10.1016/j.jmp.2018.07.005>, and the Heck (2019) <doi:10.31234/osf.io/whp8t> interval estimates.

r-robin 2.0.0
Propagated dependencies: r-spam@2.11-1 r-reshape2@1.4.5 r-qpdf@1.4.1 r-perturbr@0.1.3 r-networkd3@0.4.1 r-matrix@1.7-4 r-igraph@2.2.1 r-gridextra@2.3 r-ggplot2@4.0.1 r-fdatest@2.1.1 r-desctools@0.99.60 r-biocparallel@1.44.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/ValeriaPolicastro/robin
Licenses: Expat
Build system: r
Synopsis: ROBustness in Network
Description:

Assesses the robustness of the community structure of a network found by one or more community detection algorithm to give indications about their reliability. It detects if the community structure found by a set of algorithms is statistically significant and compares the different selected detection algorithms on the same network. robin helps to choose among different community detection algorithms the one that better fits the network of interest. Reference in Policastro V., Righelli D., Carissimo A., Cutillo L., De Feis I. (2021) <https://journal.r-project.org/archive/2021/RJ-2021-040/index.html>.

r-rfpermute 2.5.5
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-swfscmisc@1.7 r-scales@1.4.0 r-rlang@1.1.6 r-randomforest@4.7-1.2 r-gridextra@2.3 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/SWFSC/rfPermute
Licenses: GPL 2+
Build system: r
Synopsis: Estimate Permutation p-Values for Random Forest Importance Metrics
Description:

Estimate significance of importance metrics for a Random Forest model by permuting the response variable. Produces null distribution of importance metrics for each predictor variable and p-value of observed. Provides summary and visualization functions for randomForest results.

r-ritools 0.3-5
Propagated dependencies: r-xtable@1.8-4 r-tidyr@1.3.1 r-tibble@3.3.0 r-svd@0.5.8 r-survival@3.8-3 r-sparsem@1.84-2 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RItools
Licenses: GPL 2+
Build system: r
Synopsis: Randomization Inference Tools
Description:

This package provides tools for randomization-based inference. Current focus is on the d^2 omnibus test of differences of means following Hansen and Bowers (2008) <doi:10.1214/08-STS254> . This test is useful for assessing balance in matched observational studies or for analysis of outcomes in block-randomized experiments.

r-rspiro 0.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rspiro
Licenses: GPL 2+
Build system: r
Synopsis: Implementation of Spirometry Equations
Description:

Implementation of various spirometry equations in R, currently the GLI-2012 (Global Lung Initiative; Quanjer et al. 2012 <doi:10.1183/09031936.00080312>), the race-neutral GLI global 2022 (Global Lung Initiative; Bowerman et al. 2023 <doi:10.1164/rccm.202205-0963OC>), the NHANES3 (National Health and Nutrition Examination Survey; Hankinson et al. 1999 <doi:10.1164/ajrccm.159.1.9712108>) and the JRS 2014 (Japanese Respiratory Society; Kubota et al. 2014 <doi:10.1016/j.resinv.2014.03.003>) equations. Also the GLI-2017 diffusing capacity equations <doi:10.1183/13993003.00010-2017> are implemented. Contains user-friendly functions to calculate predicted and LLN (Lower Limit of Normal) values for different spirometric parameters such as FEV1 (Forced Expiratory Volume in 1 second), FVC (Forced Vital Capacity), etc, and to convert absolute spirometry measurements to percent (%) predicted and z-scores.

r-rebib 0.5.0
Propagated dependencies: r-xfun@0.54 r-whisker@0.4.1 r-stringr@1.6.0 r-logger@0.4.1 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/Abhi-1U/rebib
Licenses: Expat
Build system: r
Synopsis: Convert and Aggregate Bibliographies
Description:

Authors working with LaTeX articles use the built-in bibliography options and BibTeX files. While this might work with LaTeX', it does not function well with Web articles. As a way out, rebib offers tools to convert and combine bibliographies from both sources.

r-rologit 0.1.3
Propagated dependencies: r-survival@3.8-3 r-evd@2.3-7.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ROlogit
Licenses: LGPL 3
Build system: r
Synopsis: Fit Rank-Ordered Logit (RO-Logit) Model
Description:

This package implements the rank-ordered logit (RO-logit) model for stratified analysis of continuous outcomes introduced by Tan et al. (2017) <doi:10.1177/0962280217747309>. Model diagnostics based on the heuristic residuals and estimates in linear scales are available from the package, and outcomes with ties are supported.

r-rgraph6 2.0-5
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://mbojan.github.io/rgraph6/
Licenses: GPL 3+
Build system: r
Synopsis: Representing Graphs as 'graph6', 'digraph6' or 'sparse6' Strings
Description:

Encode network data as strings of printable ASCII characters. Implemented functions include encoding and decoding adjacency matrices, edgelists, igraph, and network objects to/from formats graph6', sparse6', and digraph6'. The formats and methods are described in McKay, B.D. and Piperno, A (2014) <doi:10.1016/j.jsc.2013.09.003>.

r-rwekajars 3.9.3-2
Dependencies: openjdk@25
Propagated dependencies: r-rjava@1.0-11
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RWekajars
Licenses: GPL 2
Build system: r
Synopsis: R/Weka Interface Jars
Description:

External jars required for package RWeka'.

r-rcppmecab 0.0.1.2
Propagated dependencies: r-rcppparallel@5.1.11-1 r-rcpp@1.1.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RcppMeCab
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: 'rcpp' Wrapper for 'mecab' Library
Description:

R package based on Rcpp for MeCab': Yet Another Part-of-Speech and Morphological Analyzer. The purpose of this package is providing a seamless developing and analyzing environment for CJK texts. This package utilizes parallel programming for providing highly efficient text preprocessing posParallel() function. For installation, please refer to README.md file.

r-runcharter 0.2.0
Propagated dependencies: r-zoo@1.8-14 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/johnmackintosh/runcharter
Licenses: GPL 3+
Build system: r
Synopsis: Automatically Plot, Analyse and Revises Limits of Multiple Run Charts
Description:

Plots multiple run charts, finds successive signals of improvement, and revises medians when each signal occurs. Finds runs above, below, or on both sides of the median, and returns a plot and a data.table summarising original medians and any revisions, for all groups within the supplied data.

r-remfpca 2.0.0
Propagated dependencies: r-r6@2.6.1 r-matrix@1.7-4 r-fda@6.3.0 r-expm@1.0-0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/haghbinh/ReMFPCA
Licenses: GPL 2+
Build system: r
Synopsis: Regularized Multivariate Functional Principal Component Analysis
Description:

This package provides methods and tools for implementing regularized multivariate functional principal component analysis ('ReMFPCA') for multivariate functional data whose variables might be observed over different dimensional domains. ReMFPCA is an object-oriented interface leveraging the extensibility and scalability of R6. It employs a parameter vector to control the smoothness of each functional variable. By incorporating smoothness constraints as penalty terms within a regularized optimization framework, ReMFPCA generates smooth multivariate functional principal components, offering a concise and interpretable representation of the data. For detailed information on the methods and techniques used in ReMFPCA', please refer to Haghbin et al. (2023) <doi:10.48550/arXiv.2306.13980>.

r-rminqa 0.3.1
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rminqa
Licenses: GPL 2+
Build system: r
Synopsis: Derivative-Free Optimization in R using C++
Description:

Perform derivative-free optimization algorithms in R using C++. A wrapper interface is provided to call C function of the bobyqa implementation (See <https://github.com/emmt/Algorithms/tree/master/bobyqa>).

r-rnames 1.0.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rnames
Licenses: Expat
Build system: r
Synopsis: Recursive Display of Items in Nested Lists
Description:

Recursive display of names and paths of all the items nested within sublists of a list object.

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