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This package provides a set of functions for generating SPSS syntax files from the R environment.
Launch an application by a simple click without opening R or RStudio. The package has 3 functions of which only one is essential in its use, `shiny.exe()`. It generates a script in the open shiny project then create a shortcut in the same folder that allows you to launch the app by clicking.If you set `host = public'`, the application will be launched on the public server to which you are connected. Thus, all other devices connected to the same server will be able to access the application through the link of your `IPv4` extended by the port. You can stop the application by leaving the terminal opened by the shortcut.
By binding R functions and the Highcharts <http://www.highcharts.com/> charting library, sankeywheel package provides a simple way to draw dependency wheels and sankey diagrams.
This package provides functions for automated noncompartmental pharmacokinetic (NCA) analysis using concentration-time data. The package estimates pharmacokinetic parameters including area under the concentration-time curve (AUC), area under the first moment curve (AUMC), maximum concentration (Cmax), time to maximum concentration (Tmax), terminal elimination rate constant (Kel), elimination half-life, clearance, volume of distribution, and mean residence time (MRT). It supports automatic terminal phase selection, bootstrap confidence intervals, and publication-ready concentration-time profiles. Methods are based on Gibaldi and Perrier (1982, ISBN:9780824710422).
This package provides functions and classes for spatial resampling to use with the rsample package, such as spatial cross-validation (Brenning, 2012) <doi:10.1109/IGARSS.2012.6352393>. The scope of rsample and spatialsample is to provide the basic building blocks for creating and analyzing resamples of a spatial data set, but neither package includes functions for modeling or computing statistics. The resampled spatial data sets created by spatialsample do not contain much overhead in memory.
Collect your data on digital marketing campaigns from Snapchat Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.
Integration of two data sources referred to the same target population which share a number of variables. Some functions can also be used to impute missing values in data sets through hot deck imputation methods. Methods to perform statistical matching when dealing with data from complex sample surveys are available too.
Create mixed models with repeated measures using natural cubic splines applied to an observed continuous time variable, as described by Donohue et al. (2023) <doi:10.1002/pst.2285>. Iterate through multiple covariance structure types until one converges. Categorize observed time according to scheduled visits. Perform subgroup analyses.
This package provides tools for simulation of plant breeding programs as described, for example, by Melchinger and Frisch (2023) <doi:10.1007/s00122-023-04446-3>, prediction of segregation variance (Osthushenrich, Frisch and Herzog (2017) <doi:10.1371/journal.pone.0188839>), genomic prediction (Hofheinz and Frisch (2014) <doi:10.1534/g3.113.010025>), linkage disequilibrium based haplotype construction, and planning of marker assisted back crossing programs. It provides an integrated framework for simulation and analysis of plant breeding programs.
This package provides two methods for segmentation and joint segmentation/clustering of bivariate time-series. Originally intended for ecological segmentation (home-range and behavioural modes) but easily applied on other series, the package also provides tools for analysing outputs from R packages moveHMM and marcher'. The segmentation method is a bivariate extension of Lavielle's method available in adehabitatLT (Lavielle, 1999 <doi:10.1016/S0304-4149(99)00023-X> and 2005 <doi:10.1016/j.sigpro.2005.01.012>). This method rely on dynamic programming for efficient segmentation. The segmentation/clustering method alternates steps of dynamic programming with an Expectation-Maximization algorithm. This is an extension of Picard et al (2007) <doi:10.1111/j.1541-0420.2006.00729.x> method (formerly available in cghseg package) to the bivariate case. The method is fully described in Patin et al (2018) <doi:10.1101/444794>.
This package implements a set of distribution modeling methods that are suited to species with small sample sizes (e.g., poorly sampled species or rare species). While these methods can also be used on well-sampled taxa, they are united by the fact that they can be utilized with relatively few data points. More details on the currently implemented methodologies can be found in Maitner et al. (2026) <doi:10.1002/ecog.08112>, Drake and Richards (2018) <doi:10.1002/ecs2.2373>, Drake (2015) <doi:10.1098/rsif.2015.0086>, and Drake (2014) <doi:10.1890/ES13-00202.1>.
This package provides several functions and datasets for area level of Small Area Estimation under Spatial Model using Hierarchical Bayesian (HB) Method. Model-based estimators include the HB estimators based on a Spatial Fay-Herriot model with univariate normal distribution for variable of interest.The rjags package is employed to obtain parameter estimates. For the reference, see Rao and Molina (2015) <doi:10.1002/9781118735855>.
It leverages the network-like architecture of scientific models together with software quality metrics to identify chains of function calls that are more prone to generating and propagating errors. It operates on tbl_graph objects representing call dependencies between functions (callers and callees) and computes risk scores for individual functions and for paths (sequences of function calls) based on cyclomatic complexity, in-degree and betweenness centrality. The package supports variance-based uncertainty and sensitivity analyses after Puy et al. (2022) <doi:10.18637/jss.v102.i05> to assess how risk scores change under alternative risk definitions.
This package provides functions and datasets from Jones, O.D., R. Maillardet, and A.P. Robinson. 2014. An Introduction to Scientific Programming and Simulation, Using R. 2nd Ed. Chapman And Hall/CRC.
Fits Bayesian linear mixed models for spatial and space-time data with fixed effects, independent and identically distributed (iid) grouped random effects, and structured latent processes. The formula interface supports first-order autoregressive (AR(1)) effects, dense Gaussian processes, nearest-neighbor Gaussian processes, proper and Leroux conditional autoregressive (CAR) effects, ordered directed acyclic graph autoregressive (DAGAR) effects, separable CAR-time and DAGAR-time effects, and spatially varying coefficients. The sampler uses sparse precision matrix calculations when available and includes post-fitting tools for latent process recovery, fitted values, prediction, pointwise log likelihoods, and posterior sample extraction. Method details include Datta et al. (2016) <doi:10.1080/01621459.2015.1044091>, Finley et al. (2019) <doi:10.1080/10618600.2018.1537924>, Datta et al. (2019) <doi:10.1214/19-BA1177>, and May and Finley (2025) <doi:10.1016/j.spasta.2025.100917>.
Data from statistical agencies and other institutions are mostly confidential. This package, introduced in Templ, Kowarik and Meindl (2017) <doi:10.18637/jss.v067.i04>, can be used for the generation of anonymized (micro)data, i.e. for the creation of public- and scientific-use files. The theoretical basis for the methods implemented can be found in Templ (2017) <doi:10.1007/978-3-319-50272-4>. Various risk estimation and anonymization methods are included. Note that the package includes a graphical user interface published in Meindl and Templ (2019) <doi:10.3390/a12090191> that allows to use various methods of this package.
The developed function is designed for the generation of spatial grids based on user-specified longitude and latitude coordinates. The function first validates the input longitude and latitude values, ensuring they fall within the appropriate geographic ranges. It then creates a polygon from the coordinates and determines the appropriate Universal Transverse Mercator zone based on the provided hemisphere and longitude values. Subsequently, transforming the input Shapefile to the Universal Transverse Mercator projection when necessary. Finally, a spatial grid is generated with the specified interval and saved as a Shapefile. For method details see, Brus,D.J.(2022).<DOI:10.1201/9781003258940>. The function takes into account crucial parameters such as the hemisphere (north or south), desired grid interval, and the output Shapefile path. The developed function is an efficient tool, simplifying the process of empty spatial grid generation for applications such as, geo-statistical analysis, digital soil mapping product generation, etc. Whether for environmental studies, urban planning, or any other geo-spatial analysis, this package caters to the diverse needs of users working with spatial data, enhancing the accessibility and ease of spatial data processing and visualization.
Fast computation of Conley (1999) <doi:10.1016/S0304-4076(98)00084-0> spatial heteroskedasticity and autocorrelation consistent (HAC) standard errors for linear regression models with geo-coded data, with a fast C++ implementation by Christensen, Hartman, and Samii (2021) <doi:10.1017/S0020818321000187>. Performance-critical distance calculations, kernel weighting, and variance component accumulation are implemented in C++ via Rcpp and RcppArmadillo'. Includes tools for estimating the spatial correlation range from covariograms and correlograms following the bandwidth selection method proposed in Lehner (2026) <doi:10.48550/arXiv.2603.03997>, and diagnostic visualizations for bandwidth selection.
Calculates ratings for two-player or multi-player challenges. Methods included in package such as are able to estimate ratings (players strengths) and their evolution in time, also able to predict output of challenge. Algorithms are based on Bayesian Approximation Method, and they don't involve any matrix inversions nor likelihood estimation. Parameters are updated sequentially, and computation doesn't require any additional RAM to make estimation feasible. Additionally, base of the package is written in C++ what makes sport computation even faster. Methods used in the package refer to Mark E. Glickman (1999) <https://www.glicko.net/research/glicko.pdf>; Mark E. Glickman (2001) <doi:10.1080/02664760120059219>; Ruby C. Weng, Chih-Jen Lin (2011) <https://www.jmlr.org/papers/volume12/weng11a/weng11a.pdf>; W. Penny, Stephen J. Roberts (1999) <doi:10.1109/IJCNN.1999.832603>.
Selects invalid instruments amongst a candidate of potentially bad instruments. The algorithm selects potentially invalid instruments and provides an estimate of the causal effect between exposure and outcome.
An English language syllable counter, plus readability score measure-er. For readability, we support Flesch Reading Ease and Flesch-Kincaid Grade Level ('Kincaid et al'. 1975) <https://stars.library.ucf.edu/cgi/viewcontent.cgi?article=1055&context=istlibrary>, Automated Readability Index ('Senter and Smith 1967) <https://apps.dtic.mil/sti/citations/AD0667273>, Simple Measure of Gobbledygook (McLaughlin 1969), and Coleman-Liau (Coleman and Liau 1975) <doi:10.1037/h0076540>. The package has been carefully optimized and should be very efficient, both in terms of run time performance and memory consumption. The main methods are vectorized by document, and scores for multiple documents are computed in parallel via OpenMP'.
This package provides functions and data sets for data sharpening. Nonparametric regressions are computed subject to smoothness and other kinds of penalties.
Streamlines geographic data transformation, storage and publication, simplifying data preparation and enhancing interoperability across formats and platforms.
Estimating the Shapley values using the algorithm in the paper Liuqing Yang, Yongdao Zhou, Haoda Fu, Min-Qian Liu and Wei Zheng (2024) <doi:10.1080/01621459.2023.2257364> "Fast Approximation of the Shapley Values Based on Order-of-Addition Experimental Designs". You provide the data and define the value function, it retures the estimated Shapley values based on sampling methods or experimental designs.