_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel search send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


python-eeg-positions 2.1.2
Propagated dependencies: python-matplotlib@3.10.8 python-numpy@2.3.1 python-pandas@2.3.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://eeg-positions.readthedocs.io/
Licenses: Expat
Build system: pyproject
Synopsis: Compute and plot standard EEG electrode positions
Description:

This package contains code to compute the standard EEG electrode locations on a spherical head model for the 10-20, 10-10, and 10-05 system.

python-mne-icalabel 0.8.1
Propagated dependencies: python-joblib@1.5.2 python-matplotlib@3.10.8 python-mne@1.11.0 python-mne-bids@0.18.0 python-numpy@2.3.1 python-packaging@25.0 python-pandas@2.3.3 python-picard@0.8.1 python-pooch@1.8.1 python-psutil@7.0.0 python-pytorch@2.10.0 python-qtpy@2.4.3 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mne.tools/mne-icalabel
Licenses: Modified BSD
Build system: pyproject
Synopsis: Automatic labeling of ICA components from MEG, EEG and iEEG data with MNE
Description:

mne-icalabel is a Python package for labeling independent components that stem from an Independent Component Analysis (ICA).

python-bycycle 1.2.0
Propagated dependencies: python-matplotlib@3.10.8 python-neurodsp@2.3.0 python-numpy@2.3.1 python-pandas@2.3.3 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://bycycle-tools.github.io/
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Cycle-by-cycle analyses of neural oscillations
Description:

bycycle is a tool for quantifying features of neural oscillations in the time domain, as opposed to the frequency domain, using a cycle-by-cycle approach.

python-edfio 0.4.10
Propagated dependencies: python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://edfio.readthedocs.io
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Read and write EDF/EDF+ files
Description:

edfio is a Python package for reading and writing EDF and EDF+C files.

python-curryreader 0.1.2
Propagated dependencies: python-matplotlib@3.10.8 python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/mne-tools/curry-python-reader
Licenses: Modified BSD
Build system: pyproject
Synopsis: File reader for Compumedics Neuroscan data formats
Description:

This is an open-source tool which allows to load CURRY data into Python. It supports: raw float (.cdt), ascii (.cdt), legacy raw float (.dat) and legacy ascii (.dat).

python-pyriemann 0.10
Propagated dependencies: python-joblib@1.5.2 python-matplotlib@3.10.8 python-numpy@2.3.1 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pyriemann.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Machine learning for multivariate data with Riemannian geometry
Description:

pyRiemann is a Python machine learning package based on scikit-learn API. It provides a high-level interface for processing and classification of real (resp. complex)-valued multivariate data through the Riemannian geometry of symmetric (resp. Hermitian) positive definite (SPD) (resp. HPD) matrices.

python-mne-faster 1.2.2
Propagated dependencies: python-mne@1.11.0 python-numpy@2.3.1 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/wmvanvliet/mne-faster
Licenses: Modified BSD
Build system: pyproject
Synopsis: Automatic EEG bad channel/epoch/ICA-component detection using FASTER
Description:

FASTER is a fully automated, unsupervised method for processing of high density EEG data.

python-mne-ari 0.1.2-1.3c78a18
Propagated dependencies: python-mne@1.11.0 python-numpy@2.3.1 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/john-veillette/mne-ari
Licenses: Modified BSD
Build system: pyproject
Synopsis: All-Resolutions Inference for M/EEG
Description:

This package implements both parametric and permutation-based ARI, and is meant to be compatible with the MNE-Python ecosystem.

python-wfdb 4.3.0
Propagated dependencies: python-aiohttp@3.11.18 python-fsspec@2026.1.0 python-matplotlib@3.10.8 python-numpy@2.3.1 python-pandas@2.3.3 python-requests@2.32.5 python-scipy@1.16.3 python-soundfile@0.13.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://wfdb.readthedocs.io
Licenses: Expat
Build system: pyproject
Synopsis: Tools for reading, writing, and processing physiologic signals and annotations
Description:

A Python-native package for reading, writing, processing, and plotting physiologic signal and annotation data. The core I/O functionality is based on the Waveform Database (WFDB) specifications.

python-klusta 3.0.16-0.408e898
Propagated dependencies: python-click@8.1.8 python-h5py@3.15.1 python-numpy@2.3.1 python-scipy@1.16.3 python-six@1.17.0 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://klusta.cortexlab.net
Licenses: Modified BSD
Build system: pyproject
Synopsis: Spike detection and automatic clustering for spike sorting
Description:

klusta is an open source package for automatic spike sorting of multielectrode neurophysiological recordings made with probes containing up to a few dozens of sites.

python-mffpy 0.10.0
Propagated dependencies: python-deprecated@1.3.1 python-lxml@6.0.1 python-numpy@2.3.1 python-pytz@2025.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/BEL-Public/mffpy
Licenses: ASL 2.0
Build system: pyproject
Synopsis: Reader and Writer for Philips' MFF file format
Description:

mffpy is a lean reader for EGI's MFF file format. These files are directories containing several files of mostly xml files, but also binary files.

python-elephant 1.1.1-0.db5a5f0
Propagated dependencies: python-jinja2@3.1.2 python-neo@0.14.3 python-numpy@2.3.1 python-quantities@0.16.4 python-scikit-learn@1.7.2 python-scipy@1.16.3 python-six@1.17.0 python-statsmodels@0.14.5 python-tqdm@4.67.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://neuralensemble.org/elephant/
Licenses: Modified BSD
Build system: pyproject
Synopsis: Analysis of electrophysiology data in Python
Description:

Elephant (Electrophysiology Analysis Toolkit) is an open-source, community centered library for the analysis of electrophysiological data in the Python programming language. The focus of Elephant is on generic analysis functions for spike train data and time series recordings from electrodes, such as the local field potentials (LFP) or intracellular voltages. In addition to providing a common platform for analysis code from different laboratories, the Elephant project aims to provide a consistent and homogeneous analysis framework that is built on a modular foundation. Elephant is the direct successor to Neurotools and maintains ties to complementary projects such as OpenElectrophy and spykeviewer.

python-pyedflib 0.1.42
Propagated dependencies: python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pyedflib.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Library to read/write EDF+/BDF+ files
Description:

pyEDFlib is a Python library to read/write EDF+/BDF+ files based on EDFlib. EDF means European Data Format

python-pycrostates 0.6.1
Propagated dependencies: python-decorator@5.2.1 python-jinja2@3.1.2 python-joblib@1.5.2 python-matplotlib@3.10.8 python-mne@1.11.0 python-numpy@2.3.1 python-packaging@25.0 python-pooch@1.8.1 python-psutil@7.0.0 python-scikit-learn@1.7.2 python-scipy@1.16.3
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://pycrostates.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Python package for EEG microstate segmentation
Description:

This package provides a simple open source Python package for EEG microstate segmentation.

python-sleepecg 0.5.9
Propagated dependencies: python-edfio@0.4.10 python-joblib@1.5.2 python-matplotlib@3.10.8 python-numba@0.62.1 python-numpy@2.3.1 python-pyyaml@6.0.2 python-requests@2.32.5 python-scipy@1.16.3 python-tqdm@4.67.1 python-wfdb@4.3.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://sleepecg.readthedocs.io
Licenses: Modified BSD
Build system: pyproject
Synopsis: Sleep stage classification using ECG data
Description:

This package provides a library for sleep stage classification using ECG data.

python-mne-rsa 1.0
Propagated dependencies: python-mne@1.11.0 python-nibabel@5.3.2 python-pyside-6@6.9.2 python-pyvista@0.46.5 python-pyvistaqt@0.11.3 python-scikit-learn@1.7.2
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mne.tools/mne-rsa
Licenses: Modified BSD
Build system: pyproject
Synopsis: Representational Similarity Analysis on MEG and EEG data
Description:

This is a Python package for performing representational similarity analysis (RSA) using MNE-Python data structures. The main use-case is to perform RSA using a “searchlight” approach through time and/or a volumetric or surface source space.

python-pyxdf 1.17.1
Propagated dependencies: python-numpy@2.3.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/xdf-modules/pyxdf
Licenses: FreeBSD
Build system: pyproject
Synopsis: Python library for importing XDF (Extensible Data Format)
Description:

XDF is a general-purpose container format for multi-channel time series data with extensive associated meta information. XDF is tailored towards biosignal data such as EEG, EMG, EOG, ECG, GSR, MEG, but it can also handle data with high sampling rate (like audio) or data with a high number of channels (like fMRI or raw video). Meta information is stored as XML.

liblsl 1.17.5
Dependencies: asio@1.36.0 boost@1.89.0 pugixml@1.12.1
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://labstreaminglayer.readthedocs.io/
Licenses: Expat
Build system: cmake
Synopsis: Lab Streaming Layer library
Description:

This package provides a C++ library for multi-modal time-synched data transmission over the local network.

python-nwb2bids 0.8.0
Propagated dependencies: python-pandas@2.3.3 python-pydantic@2.12.5 python-pynwb@3.1.3 python-rich-click@1.8.9 python-ruamel.yaml@0.18.14 python-typing-extensions@4.15.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://nwb2bids.readthedocs.io/
Licenses: Expat
Build system: pyproject
Synopsis: Reorganize NWB files into a BIDS directory layout
Description:

nwb2bids reorganizes NWB files into a BIDS directory layout.

Features:

  • Automatically renames NWB files and their directories to conform to BIDS conventions.

  • Extracts relevant metadata from NWB files to populate BIDS sidecar TSV & JSON files.

  • Currently supports BEP32 (micro-electrode electrophysiology) data types, such as extracellular (ecephys) and intracellular (icephys) electrophysiology, as well as associated behavioral events.

openmeeg 2.5.15
Dependencies: hdf5@1.14.6 matio@1.5.23 openblas@0.3.30 vtk@9.6.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://openmeeg.github.io
Licenses: CeCILL-B
Build system: cmake
Synopsis: Forward problems solver in the field of EEG and MEG
Description:

The OpenMEEG software is a C++ package for solving the forward problems of electroencephalography (EEG) and magnetoencephalography (MEG).

meggie 1.10.0
Propagated dependencies: python-appdirs@1.4.4 python-colorama@0.4.6 python-h5io@0.2.5 python-json-logger@2.0.7 python-matplotlib@3.10.8 python-mne@1.11.0 python-mne-qt-browser@0.7.4 python-numpy@2.3.1 python-pandas@2.3.3 python-pyqt@5.15.11 python-scikit-learn@1.7.2
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://cibr-jyu.github.io/meggie
Licenses: Modified BSD
Build system: pyproject
Synopsis: User-friendly graphical user interface to do M/EEG analysis
Description:

Meggie is an open-source software designed for intuitive MEG and EEG analysis. With its user-friendly graphical interface, Meggie brings the powerful analysis methods of MNE-Python to researchers without requiring programming skills.

python-mne-connectivity 0.7
Propagated dependencies: python-h5netcdf@1.3.0 python-joblib@1.5.2 python-mne@1.11.0 python-netcdf4@1.7.2 python-numpy@2.3.1 python-pandas@2.3.3 python-scipy@1.16.3 python-tqdm@4.67.1 python-xarray@2025.12.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://mne.tools/mne-connectivity
Licenses: Modified BSD
Build system: pyproject
Synopsis: Connectivity data analysis with MNE
Description:

MNE-Connectivity is an open-source Python package for connectivity and related measures of MEG, EEG, or iEEG data built on top of the MNE-Python API. It includes modules for data input/output, visualization, common connectivity analysis, and post-hoc statistics and processing.

python-antio 0.6.1
Propagated dependencies: python-click@8.1.8 python-numpy@2.3.1 python-packaging@25.0 python-psutil@7.0.0
Channel: guix-science
Location: guix-science/packages/electrophysiology.scm (guix-science packages electrophysiology)
Home page: https://github.com/mscheltienne/antio
Licenses: GPL 3
Build system: pyproject
Synopsis: I/O library for the CNT format from ANT Neuro
Description:

This package provides I/O functions for the CNT format from ANT Neuro.

Page: 167891098
Total packages: 2337