This package provides tools for computational epigenomics developed for the analysis, integration and simultaneous visualization of various (epi)genomics data types across multiple genomic regions in multiple samples.

The functions support identification and annotation of hotspot residues in proteins. These are individual amino acids that accumulate mutations at a much higher rate than their surrounding regions.

Playfair, Four-Square, Scytale, Columnar Transposition and Autokey methods. Further explanation on methods of classical cryptography can be found at Wikipedia; (<https://en.wikipedia.org/wiki/Classical_cipher>).

Simple and seamless access to a variety of StatCan shapefiles for mapping Canadian provinces, regions, forward sortation areas, census divisions, and subdivisions using the popular ggplot2 package.

Local linear hazard estimator and its multiplicatively bias correction, including three bandwidth selection methods: best one-sided cross-validation, double one-sided cross-validation, and standard cross-validation.

This package provides a GUI to solve dynamic biplots and classical biplot. Try matrices of 2-way and 3-way. The GUI can be run in multiple languages.

Allows the user to animate text within rmarkdown documents and shiny applications. The animations are activated using the Animate.css library. See <https://animate.style/> for more information.

Interface for extra high-dimensional smooth functions for Generalized Additive Models for Location Scale and Shape (GAMLSS) including (adaptive) lasso, ridge, elastic net and least angle regression.

Interactive shiny application for working with different kinds of latent variable analysis, with the lavaan package. Graphical output for models are provided and different estimators are supported.

Assign meaningful labels to data frame columns. labelmachine manages your label assignment rules in yaml files and makes it easy to use the same labels in multiple projects.

Complete R implementation of the OpenAI Python SDK'. Provides full compatibility with the OpenAI API including chat completions, embeddings', images, audio, fine-tuning, and model management.

Function to read PX-Web data into R via API. The example code reads data from the three national statistical institutes, Statistics Norway, Statistics Sweden and Statistics Finland.

Based on Alan D. Hutson (1999) <doi:10.1080/02664769922458>, "Calculating nonparametric confidence intervals for quantiles using fractional order statistics", Journal of Applied Statistics, 26:3, 343-353.

The Ziggurat generator for normally distributed random numbers, originally proposed by Marsaglia and Tsang (2000, https://doi.org/10.18637/jss.v005.i08) has been improved upon a few times starting with Leong et al (2005, https://doi.org/10.18637/jss.v012.i07). This package provides an aggregation for comparing different implementations in order to provide a 'faster but good enough' alternative for use with R and C++ code.

This project is a tool for words edit similarity joins (a.k.a. all-pairs similarity search) under small (< 3) edit distance constraints. It works for Levenshtein/Hamming distances and words from any alphabet. The software was originally developed for joining amino-acid/nucleotide sequences from Adaptive Immune Repertoires, where the number of words is relatively large (10^5-10^6) and the average length of words is relatively small (10-100).

Package Raccoon cleans the "wiggles" (i.e., low-frequency sinusoidal artifacts) in the JWST-NIRSpec IFS (integral field spectroscopy) data. These wiggles are caused by resampling noise or aliasing artifacts.

cl-random is a library for generating random draws from various commonly used distributions, and for calculating statistical functions, such as density, distribution and quantiles for these distributions.

This package is a fork from the retry package, but with some of added community-sourced features. It provides an easy to use, but functional decorator for retrying on exceptions.

Defines the functions used to compute the bimodal index as defined by Wang et al. (2009) <https://pmc.ncbi.nlm.nih.gov/articles/PMC2730180/>, <doi:10.4137/CIN.S2846>.

This package provides a tool to perform all different statistical tests and calculations needed by Biological dosimetry Laboratories. Detailed documentation is available in <https://biodosetools-team.github.io/documentation/>.

This package provides a ggplot2 extension that allows text to follow curved paths. Curved text makes it easier to directly label paths or neatly annotate in polar co-ordinates.

This package performs variable selection in high-dimensional sparse GLARMA models. For further details we refer the reader to the paper Gomtsyan et al. (2020), <arXiv:2007.08623v1>.

The Interactive Tree Of Life <https://itol.embl.de/> online server can edit and annotate trees interactively. The itol.toolkit package can support all types of annotation templates.

This package provides a collection of colour palettes inspired by some of our dearest butterfly species. This package provides continuous and categorical palettes, including some colour blind friendly options.