_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
clang-runtime 21.1.8
Dependencies: llvm@21.1.8 libffi@3.4.6
Channel: guix
Location: gnu/packages/llvm.scm (gnu packages llvm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

clang-runtime 14.0.6
Dependencies: llvm@14.0.6
Channel: guix
Location: gnu/packages/llvm.scm (gnu packages llvm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

clang-runtime 19.1.7
Dependencies: llvm@19.1.7 libffi@3.4.6
Channel: guix
Location: gnu/packages/llvm.scm (gnu packages llvm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

clang-runtime 20.1.8
Dependencies: llvm@20.1.8 libffi@3.4.6
Channel: guix
Location: gnu/packages/llvm.scm (gnu packages llvm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

clang-runtime 18.1.8
Dependencies: llvm@18.1.8 libffi@3.4.6
Channel: guix
Location: gnu/packages/llvm.scm (gnu packages llvm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

clang-runtime 22.1.8
Dependencies: llvm@22.1.8 libffi@3.4.6
Channel: guix
Location: gnu/packages/llvm.scm (gnu packages llvm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

ruby-sorcerer 2.0.1
Channel: guix
Location: gnu/packages/ruby-check.scm (gnu packages ruby-check)
Home page: https://github.com/rspec-given/sorcerer
Licenses: Expat
Build system: ruby
Synopsis: Ripper-style abstract syntax tree to Ruby source generator
Description:

Sorcerer generates Ruby code from a Ripper-like abstract syntax tree (i.e. S-Expressions). Sorcerer is targeted mainly at small snippets of Ruby code, expressible in a single line. Longer examples may be re-sourced, but they will be rendered in a single-line format.

ruby-net-sftp 4.0.0
Propagated dependencies: ruby-net-ssh@7.1.0
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/net-ssh/net-sftp
Licenses: Expat
Build system: ruby
Synopsis: Pure Ruby implementation of the SFTP client protocol
Description:

Net::SFTP is a pure Ruby implementation of the SFTP protocol (specifically, versions 1 through 6 of the SFTP protocol). Note that this is the “Secure File Transfer Protocol”, typically run over an SSH connection, and has nothing to do with the FTP protocol.

r-blindspiker 0.2.1
Propagated dependencies: r-tidyr@1.3.2 r-magrittr@2.0.5 r-gt@1.3.0 r-ggplot2@4.0.3 r-dplyr@1.2.1 r-bingroup@2.2-3
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/markhogue/blindspiker
Licenses: GPL 3
Build system: r
Synopsis: Laboratory Blind Spike Sample Analyses
Description:

This package provides a blind spike program provides samples to a laboratory in order to perform quality control (QC) checks. The samples provided are of a known quantity to the tester. The laboratory is typically uninformed of that the sample provided is a QC sample.

r-brandwatchr 0.3.0
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.8 r-data-table@1.18.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/Phippsy/brandwatchR
Licenses: Expat
Build system: r
Synopsis: 'Brandwatch' API to R
Description:

Interact with the Brandwatch API <https://developers.brandwatch.com/docs>. Allows you to authenticate to the API and obtain data for projects, queries, query groups tags and categories. Also allows you to directly obtain mentions and aggregate data for a specified query or query group.

r-contactdata 1.1.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://hugogruson.fr/contactdata/
Licenses: Expat
Build system: r
Synopsis: Social Contact Matrices for 177 Countries
Description:

Data package for the supplementary data in Prem et al. (2017) <doi:10.1371/journal.pcbi.1005697> and Prem et al. <doi:10.1371/journal.pcbi.1009098>. Provides easy access to contact data for 177 countries, for use in epidemiological, demographic or social sciences research.

r-cytosimplex 0.2.0
Propagated dependencies: r-viridis@0.6.5 r-rlang@1.2.0 r-rcpparmadillo@15.2.6-1 r-rcpp@1.1.1-1.1 r-rcolorbrewer@1.1-3 r-plotly@4.12.0 r-plot3d@1.4.2 r-matrix@1.7-5 r-ggplot2@4.0.3 r-cli@3.6.6
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://welch-lab.github.io/CytoSimplex/
Licenses: GPL 3
Build system: r
Synopsis: Simplex Visualization of Cell Fate Similarity in Single-Cell Data
Description:

Create simplex plots to visualize the similarity between single-cells and selected clusters in a 1-/2-/3-simplex space. Velocity information can be added as an additional layer. See Liu J, Wang Y et al (2023) <doi:10.1093/bioinformatics/btaf119> for more details.

r-gfgm-copula 1.0.4
Propagated dependencies: r-joint-cox@3.16 r-compound-cox@3.33 r-cmprsk@2.2-12
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=GFGM.copula
Licenses: GPL 2
Build system: r
Synopsis: Generalized Farlie-Gumbel-Morgenstern Copula
Description:

Compute bivariate dependence measures and perform bivariate competing risks analysis under the generalized Farlie-Gumbel-Morgenstern (FGM) copula. See Shih and Emura (2018) <doi:10.1007/s00180-018-0804-0> and Shih and Emura (2019) <doi:10.1007/s00362-016-0865-5> for details.

r-ipolygrowth 1.0.0
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.2 r-rlang@1.2.0 r-magrittr@2.0.5 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/kivanvan/ipolygrowth
Licenses: GPL 3+
Build system: r
Synopsis: Individual Growth Curve Parameter Calculation using Polynomial Functions
Description:

Calculation of key bacterial growth curve parameters using fourth degree polynomial functions. Six growth curve parameters are provided including peak growth rate, doubling time, lag time, maximum growth, and etc. ipolygrowth takes time series data from individual biological samples (with technical replicates) or multiple samples.

r-icesconnect 1.1.4
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.8 r-base64enc@0.1-6 r-askpass@1.2.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://www.ices.dk/data/tools/Pages/WebServices.aspx
Licenses: GPL 3
Build system: r
Synopsis: Provides User Tokens for Access to ICES Web Services
Description:

This package provides user tokens for ICES web services that require authentication and authorization. Web services covered by this package are ICES VMS database, the ICES DATSU web services, and the ICES SharePoint site <https://www.ices.dk/data/tools/Pages/WebServices.aspx>.

r-mtaopendata 0.1.1
Propagated dependencies: r-tibble@3.3.1 r-rlang@1.2.0 r-jsonlite@2.0.0 r-janitor@2.2.1 r-httr@1.4.8 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://martinezc1.github.io/mtaOpenData/
Licenses: Expat
Build system: r
Synopsis: Convenient Access to MTA Open Data API Endpoints
Description:

This package provides helper functions to access datasets from the Metropolitan Transportation Authority (MTA) portion of the New York State Open Data platform <https://data.ny.gov/>. Returns results as tidy tibbles with support for optional filtering, sorting, and row limits through the Socrata API.

r-medfateland 3.0.0
Propagated dependencies: r-tidyterra@1.3.0 r-tidyr@1.3.2 r-tibble@3.3.1 r-terra@1.9-27 r-stars@0.7-2 r-shiny@1.13.0 r-sf@1.1-1 r-rlang@1.2.0 r-rcppparallel@5.1.11-2 r-rcpparmadillo@15.2.6-1 r-rcpp@1.1.1-1.1 r-meteoland@2.2.8 r-medfate@5.1.0 r-lifecycle@1.0.5 r-jsonlite@2.0.0 r-httr@1.4.8 r-ggplot2@4.0.3 r-dplyr@1.2.1 r-cli@3.6.6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://emf-creaf.github.io/medfateland/
Licenses: GPL 2+
Build system: r
Synopsis: Mediterranean Landscape Simulation
Description:

Simulate forest hydrology, forest function and dynamics over landscapes [De Caceres et al. (2015) <doi:10.1016/j.agrformet.2015.06.012>]. Parallelization is allowed in several simulation functions and simulations may be conducted including spatial processes such as lateral water transfer and seed dispersal.

r-outbreaker2 1.1.4
Propagated dependencies: r-visnetwork@2.1.4 r-rcpp@1.1.1-1.1 r-magrittr@2.0.5 r-ggplot2@4.0.3 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=outbreaker2
Licenses: Expat
Build system: r
Synopsis: Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
Description:

Bayesian reconstruction of disease outbreaks using epidemiological and genetic information. Jombart T, Cori A, Didelot X, Cauchemez S, Fraser C and Ferguson N. 2014. <doi:10.1371/journal.pcbi.1003457>. Campbell, F, Cori A, Ferguson N, Jombart T. 2019. <doi:10.1371/journal.pcbi.1006930>.

r-stochvoltmb 0.3.0
Propagated dependencies: r-tmb@1.9.21 r-sn@2.1.3 r-rcppeigen@0.3.4.0.2 r-mass@7.3-65 r-ggplot2@4.0.3 r-data-table@1.18.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/JensWahl/stochvolTMB
Licenses: GPL 3
Build system: r
Synopsis: Likelihood Estimation of Stochastic Volatility Models
Description:

Parameter estimation for stochastic volatility models using maximum likelihood. The latent log-volatility is integrated out of the likelihood using the Laplace approximation. The models are fitted via TMB (Template Model Builder) (Kristensen, Nielsen, Berg, Skaug, and Bell (2016) <doi:10.18637/jss.v070.i05>).

r-searchlight 0.1.0
Propagated dependencies: r-xml2@1.5.2 r-withr@3.0.2 r-tidyr@1.3.2 r-tibble@3.3.1 r-suncalc@0.5.3 r-spdep@1.4-2 r-sf@1.1-1 r-rlang@1.2.0 r-readr@2.2.0 r-posterior@1.7.0 r-mass@7.3-65 r-jsonlite@2.0.0 r-httr2@1.2.2 r-ggplot2@4.0.3 r-dplyr@1.2.1 r-digest@0.6.39 r-commonmark@2.0.0 r-cli@3.6.6 r-carbayes@6.1.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/BlackThrive/searchlight
Licenses: Expat
Build system: r
Synopsis: Audited Analysis of Police Stop and Search Records
Description:

Acquire and audit public police stop and search archives for England and Wales, retaining provenance and explicit coverage information. Designed for exposure-based ethnic disparity analysis with separately reported sampling and assumption uncertainty. Contains public sector information licensed under the Open Government Licence v3.0.

r-tvmediation 1.1.1
Propagated dependencies: r-locpol@0.9.0 r-ggplot2@4.0.3 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/dcoffman/tvmediation/wiki
Licenses: GPL 3
Build system: r
Synopsis: Time Varying Mediation Analysis
Description:

This package provides functions for estimating mediation effects that vary over time as described in Cai X, Coffman DL, Piper ME, Li R. Estimation and inference for the mediation effect in a time-varying mediation model. BMC Med Res Methodol. 2022;22(1):1-12.

r-winratiosim 1.0.0
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://github.com/yain22/winratiosim
Licenses: GPL 2
Build system: r
Synopsis: Simulate Power for Hierarchical Win Ratio Endpoints
Description:

This package provides simulation tools for power analysis in two-arm clinical trials with hierarchical win ratio endpoints. The package simulates time-to-event, recurrent event, and continuous outcomes, applies prioritized pairwise win/loss scoring, and summarizes win ratio and Finkelstein-Schoenfeld test operating characteristics.

clang-runtime 19.1.7
Dependencies: llvm@19.1.7
Channel: nonguix
Location: nongnu/packages/wasm.scm (nongnu packages wasm)
Home page: https://compiler-rt.llvm.org
Licenses: ASL 2.0
Build system: cmake
Synopsis: Runtime library for Clang/LLVM
Description:

The "clang-runtime" library provides the implementations of run-time functions for C and C++ programs. It also provides header files that allow C and C++ source code to interface with the "sanitization" passes of the clang compiler. In LLVM this library is called "compiler-rt".

r-remoteparts 1.0.4
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.1-1.1 r-iterators@1.0.14 r-geosphere@1.6-8 r-foreach@1.5.2 r-doparallel@1.0.17 r-compquadform@1.4.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/morrowcj/remotePARTS
Licenses: GPL 3+
Build system: r
Synopsis: Spatiotemporal Autoregression Analyses for Large Data Sets
Description:

These tools were created to test map-scale hypotheses about trends in large remotely sensed data sets but any data with spatial and temporal variation can be analyzed. Tests are conducted using the PARTS method for analyzing spatially autocorrelated time series (Ives et al., 2021: <doi:10.1016/j.rse.2021.112678>). The method's unique approach can handle extremely large data sets that other spatiotemporal models cannot, while still appropriately accounting for spatial and temporal autocorrelation. This is done by partitioning the data into smaller chunks, analyzing chunks separately and then combining the separate analyses into a single, correlated test of the map-scale hypotheses.

Total packages: 32825