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r-paeg1aprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.68.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/paeg1aprobe
Licenses: LGPL 2.0+
Synopsis: Probe sequence data for microarrays of type paeg1a
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was P\_aeg1a\_probe\_tab.

r-similarpeak 1.38.0
Propagated dependencies: r-r6@2.5.1
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://github.com/adeschen/similaRpeak
Licenses: Artistic License 2.0
Synopsis: Metrics to estimate a level of similarity between two ChIP-Seq profiles
Description:

This package calculates metrics which quantify the level of similarity between ChIP-Seq profiles. More specifically, the package implements six pseudometrics specialized in pattern similarity detection in ChIP-Seq profiles.

r-yeast2probe 2.18.0
Propagated dependencies: r-annotationdbi@1.68.0
Channel: guix-bioc
Location: guix-bioc/packages/y.scm (guix-bioc packages y)
Home page: https://bioconductor.org/packages/yeast2probe
Licenses: LGPL 2.0+
Synopsis: Probe sequence data for microarrays of type yeast2
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Yeast\_2\_probe\_tab.

r-mlr3filters 0.8.1
Propagated dependencies: r-backports@1.5.0 r-checkmate@2.3.2 r-data-table@1.16.2 r-mlr3@0.21.1 r-mlr3misc@0.15.1 r-paradox@1.0.1 r-r6@2.5.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://mlr3filters.mlr-org.com
Licenses: LGPL 3
Synopsis: Filter based feature selection for mlr3
Description:

This package extends mlr3 with filter methods for feature selection. Besides standalone filter methods built-in methods of any machine-learning algorithm are supported. Partial scoring of multivariate filter methods is supported.

r-survivalroc 1.0.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/survivalROC
Licenses: GPL 2+
Synopsis: Time-dependent ROC curve estimation from censored survival data
Description:

Compute time-dependent ROC curve from censored survival data using Kaplan-Meier (KM) or Nearest Neighbor Estimation (NNE) method of Heagerty, Lumley & Pepe (Biometrics, Vol 56 No 2, 2000, PP 337-344)

rust-powerfmt 0.2.0
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/jhpratt/powerfmt
Licenses: Expat ASL 2.0
Synopsis: Library that provides utilities for formatting values
Description:

`powerfmt` is a library that provides utilities for formatting values. This crate makes it significantly easier to support filling to a minimum width with alignment, avoid heap allocation, and avoid repetitive calculations.

python-fb-re2 1.0.7
Dependencies: re2@2022-12-01
Channel: guix
Location: gnu/packages/python-xyz.scm (gnu packages python-xyz)
Home page: https://github.com/facebook/pyre2
Licenses: Modified BSD
Synopsis: Python wrapper for RE2
Description:

This package provides a Python extension that wraps Google's RE2 regular expression library. It implements many of the features of Python's built-in re module with compatible interfaces.

ruby-data_uri 0.1.0
Channel: guix
Location: gnu/packages/ruby.scm (gnu packages ruby)
Home page: https://github.com/dball/data_uri
Licenses: Expat
Synopsis: URI class for parsing data URIs
Description:

Data URIs allow resources to be embedded inside a URI. The URI::Data class provides support for parsing these URIs using the normal URI.parse method.

ruby-net-smtp 0.3.3
Propagated dependencies: ruby-net-protocol@0.2.1
Channel: guix
Location: gnu/packages/ruby.scm (gnu packages ruby)
Home page: https://github.com/ruby/net-smtp
Licenses: FreeBSD
Synopsis: Simple Mail Transfer Protocol client library for Ruby
Description:

This library provides functionality to send Internet mail via SMTP, the Simple Mail Transfer Protocol. The SMTP protocol specification is known as RFC2821.

r-bayesfactor 0.9.12-4.7
Propagated dependencies: r-coda@0.19-4.1 r-hypergeo@1.2-13 r-matrix@1.7-1 r-matrixmodels@0.5-3 r-mvtnorm@1.3-2 r-pbapply@1.7-2 r-rcpp@1.0.13-1 r-rcppeigen@0.3.4.0.2 r-stringr@1.5.1
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://richarddmorey.github.io/BayesFactor/
Licenses: GPL 2
Synopsis: Computation of Bayes factors for common designs
Description:

This package provides a suite of functions for computing various Bayes factors for simple designs, including contingency tables, one- and two-sample designs, one-way designs, general ANOVA designs, and linear regression.

r-rmsnumpress 1.0.1
Propagated dependencies: r-rcpp@1.0.13-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RMSNumpress
Licenses: Modified BSD
Synopsis: 'Rcpp' Bindings to Native C++ Implementation of MS Numpress
Description:

Rcpp bindings to the native C++ implementation of MS Numpress, that provides two compression schemes for numeric data from mass spectrometers. The library provides implementations of 3 different algorithms, 1 designed to compress first order smooth data like retention time or M/Z arrays, and 2 for compressing non smooth data with lower requirements on precision like ion count arrays. Refer to the publication (Teleman et al., (2014) <doi:10.1074/mcp.O114.037879>) for more details.

r-cricketdata 0.3.0
Propagated dependencies: r-xml2@1.3.6 r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rvest@1.0.4 r-readr@2.1.5 r-lubridate@1.9.3 r-jsonlite@1.8.9 r-dplyr@1.1.4 r-cli@3.6.3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://pkg.robjhyndman.com/cricketdata/
Licenses: GPL 3
Synopsis: International Cricket Data
Description:

Data on international and other major cricket matches from ESPNCricinfo <https://www.espncricinfo.com> and Cricsheet <https://cricsheet.org>. This package provides some functions to download the data into tibbles ready for analysis.

r-cfmortality 0.3.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cfmortality
Licenses: GPL 3
Synopsis: Cystic Fibrosis Survival Prediction Model Based on Stanojevic Model
Description:

Allows clinicians to predict survival probabilities over the next two years for cystic fibrosis patients, based on the clinical prediction models published in Stanojevic et al. (2019) <doi:10.1183/13993003.00224-2019>.

r-cdfquantreg 1.3.1-2
Propagated dependencies: r-pracma@2.4.4 r-mass@7.3-61 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cdfquantreg
Licenses: GPL 3
Synopsis: Quantile Regression for Random Variables on the Unit Interval
Description:

Employs a two-parameter family of distributions for modelling random variables on the (0, 1) interval by applying the cumulative distribution function (cdf) of one parent distribution to the quantile function of another.

r-datasetsicr 1.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=datasetsICR
Licenses: GPL 2+
Synopsis: Datasets from the Book "An Introduction to Clustering with R"
Description:

Companion to the book "An Introduction to Clustering with R" by P. Giordani, M.B. Ferraro and F. Martella (Springer, Singapore, 2020). The datasets are used in some case studies throughout the text.

r-distfree-cr 1.5.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: http://statgen.ualberta.ca
Licenses: GPL 2+
Synopsis: Distribution-Free Confidence Region
Description:

Constructs confidence regions without the need to know the sampling distribution of bivariate data. The method was proposed by Zhiqiu Hu & Rong-cai Yang (2013) <doi:10.1371/journal.pone.0081179.g001>.

r-euroleaguer 0.2.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-lubridate@1.9.3 r-jsonlite@1.8.9 r-httr@1.4.7 r-glue@1.8.0 r-dplyr@1.1.4 r-cli@3.6.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/FlavioLeccese92/euroleaguer/
Licenses: Expat
Synopsis: 'Euroleague basketball API'
Description:

Unofficial API wrapper for Euroleague and Eurocup basketball API (<https://www.euroleaguebasketball.net/en/euroleague/>), it allows to retrieve real-time and historical standard and advanced statistics about competitions, teams, players and games.

r-multilevlca 2.0.1
Propagated dependencies: r-tidyr@1.3.1 r-tictoc@1.2.1 r-rcpparmadillo@14.0.2-1 r-rcpp@1.0.13-1 r-pracma@2.4.4 r-mass@7.3-61 r-magrittr@2.0.3 r-klar@1.7-3 r-foreach@1.5.2 r-dplyr@1.1.4 r-clustmixtype@0.4-2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=multilevLCA
Licenses: GPL 2+
Synopsis: Estimates and Plots Single-Level and Multilevel Latent Class Models
Description:

Efficiently estimates single- and multilevel latent class models with covariates, allowing for output visualization in all specifications. For more technical details, see Lyrvall et al (2023) <doi:10.48550/arXiv.2305.07276>.

r-nettskjemar 1.0.1
Propagated dependencies: r-jsonlite@1.8.9 r-httr2@1.0.6 r-cli@3.6.3
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://github.com/CAPRO-UiO/nettskjemar
Licenses: Expat
Synopsis: Connect to the 'nettskjema.no' API of the University of Oslo
Description:

Enables users to retrieve data, meta-data, and codebooks from <https://nettskjema.no/>. The data from the API is richer than from the online data portal. Mowinckel (2021) <doi:10.5281/zenodo.4745481>.

r-pipe-design 0.5.1
Propagated dependencies: r-xtable@1.8-4 r-gtools@3.9.5 r-ggplot2@3.5.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pipe.design
Licenses: GPL 2+
Synopsis: Dual-Agent Dose Escalation for Phase I Trials using the PIPE Design
Description:

This package implements the Product of Independent beta Probabilities dose Escalation (PIPE) design for dual-agent Phase I trials as described in Mander AP, Sweeting MJ (2015) <DOI:10.1002/sim.6434>.

r-tsallisqexp 0.9-5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tsallisqexp
Licenses: GPL 2+
Synopsis: Tsallis q-Exp Distribution
Description:

Tsallis distribution also known as the q-exponential family distribution. Provide distribution d, p, q, r functions, fitting and testing functions. Project initiated by Paul Higbie and based on Cosma Shalizi's code.

r-ecoli2probe 2.18.0
Propagated dependencies: r-annotationdbi@1.68.0
Channel: guix-bioc
Location: guix-bioc/packages/e.scm (guix-bioc packages e)
Home page: https://bioconductor.org/packages/ecoli2probe
Licenses: LGPL 2.0+
Synopsis: Probe sequence data for microarrays of type ecoli2
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was E\_coli\_2\_probe\_tab.

r-mircompdata 1.36.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/miRcompData
Licenses: GPL 3 FSDG-compatible
Synopsis: Data used in the miRcomp package
Description:

Raw amplification data from a large microRNA mixture / dilution study. These data are used by the miRcomp package to assess the performance of methods that estimate expression from the amplification curves.

r-snphooddata 1.36.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/SNPhoodData
Licenses: LGPL 3+
Synopsis: Additional and more complex example data for the SNPhood package
Description:

This companion package for SNPhood provides some example datasets of a larger size than allowed for the SNPhood package. They include full and real-world examples for performing analyses with the SNPhood package.

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