This package contains the datasets and a few functions for use with the practicals outlined in Appendix A of the book Statistical Models (Davison, 2003, Cambridge University Press). The practicals themselves can be found at http://statwww.epfl.ch/davison/SM/.

This package provides functions to perform k-prototypes partitioning clustering for mixed variable-type data according to Z.Huang (1998): Extensions to the k-Means Algorithm for Clustering Large Data Sets with Categorical Variables, Data Mining and Knowledge Discovery 2, 283-304.

This package provides an API for interactive visualization of genomic data using epiviz web components. Objects in R/BioConductor can be used to generate interactive R markdown/notebook documents or can be visualized in the R Studio's default viewer.

Hilbert curve is a type of space-filling curves that fold one dimensional axis into a two dimensional space, but with still preserves the locality. This package aims to provide an easy and flexible way to visualize data through Hilbert curve.

This package implements a Bayesian approach to causal impact estimation in time series, as described in Brodersen et al. (2015) <DOI:10.1214/14-AOAS788>. See the package documentation on GitHub <https://google.github.io/CausalImpact/> to get started.

An API wrapper for Cryptowatch to get prices and other information (e.g., volume, trades, order books, bid and ask prices, live quotes, and more) about cryptocurrencies and crypto exchanges. See <https://docs.cryptowat.ch/rest-api> for a detailed documentation.

Take the examples written in your documentation of functions and use them to create shells (skeletons which must be manually completed by the user) of test files to be tested with the testthat package. Sort of like python doctests for R.

This package provides comorbidity classification algorithms such as the Pediatric Complex Chronic Conditions (PCCC), Charlson, and Elixhauser indices, supports longitudinal comorbidity flagging across encounters, and includes utilities for working with medical coding schemas such as the International Classification of Diseases (ICD).

High-throughput, flexible and reproducible extraction of data from figures in primary research papers. metaDigitise() can extract data and / or automatically calculate summary statistics for users from box plots, bar plots (e.g., mean and errors), scatter plots and histograms.

This package provides tools for traversing and working with National Hydrography Dataset Plus (NHDPlus) data. All methods implemented in nhdplusTools are available in the NHDPlus documentation available from the US Environmental Protection Agency <https://www.epa.gov/waterdata/basic-information>.

This package provides a function for fitting various penalized Bayesian cumulative link ordinal response models when the number of parameters exceeds the sample size. These models have been described in Zhang and Archer (2021) <doi:10.1186/s12859-021-04432-w>.

This package implements piecewise structural equation modeling from a single list of structural equations, with new methods for non-linear, latent, and composite variables, standardized coefficients, query-based prediction and indirect effects. See <http://jslefche.github.io/piecewiseSEM/> for more.

This package provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project. The quantifiers were Cufflinks, RSEM, kallisto, Salmon and Sailfish. Alevin example output is also included.

Test::Unit is unit testing framework for Ruby, based on xUnit principles. These were originally designed by Kent Beck, creator of extreme programming software development methodology, for Smalltalk's SUnit. It allows writing tests, checking results and automated testing in Ruby.

Test::Unit is unit testing framework for Ruby, based on xUnit principles. These were originally designed by Kent Beck, creator of extreme programming software development methodology, for Smalltalk's SUnit. It allows writing tests, checking results and automated testing in Ruby.

An experiment data package associated with the publication Dona et al. (2013). Package contains runnable vignettes showing an example image segmentation for one posterior lateral line primordium, and also the data table and code used to analyze tissue-scale lifetime-ratio statistics.

This package provides functions to prepare and filter an origin-destination matrix for thematic flow mapping purposes. This comes after Bahoken, Francoise (2016), Mapping flow matrix a contribution, PhD in Geography - Territorial sciences. See Bahoken (2017) <doi:10.4000/netcom.2565>.

This package provides tools for working with observational health data in the Observational Medical Outcomes Partnership (OMOP) Common Data Model format with a pipe friendly syntax. Common data model database table references are stored in a single compound object along with metadata.

Allows you to connect to data sources across the crypto ecosystem. This data can enable a range of activity such as portfolio tracking, programmatic trading, or industry analysis. The package is described in French (2024) <https://github.com/TrevorFrench/cryptotrackr/wiki>.

The Dirichlet (aka NBD-Dirichlet) model describes the purchase incidence and brand choice of consumer products. We estimate the model and summarize various theoretical quantities of interest to marketing researchers. Also provides functions for making tables that compare observed and theoretical statistics.

This package provides tools to check variables contained in the user environment, and inspect the currently loaded package namespaces. The intended use is to allow user scripts to throw errors or warnings if unwanted variables exist or if unwanted packages are loaded.

This package implements a semiparametric estimator for the odds ratio model with censored, time-lagged, ordered categorical outcome in a randomized clinical trial that incorporates baseline and time-dependent information. Tsiatis AA, Davidian M, Holloway ST (2023) <doi:10.1111/biom.13603>.

This package provides a versatile range of functions, including exploratory data analysis, time-series analysis, organizational network analysis, and data validation, whilst at the same time implements a set of best practices in analyzing and visualizing data specific to Microsoft Viva Insights'.

This package performs two-sample comparisons using the restricted mean survival time (RMST) when survival curves end at different time points between groups. This package implements a sensitivity approach that allows the threshold timepoint tau to be specified after the longest survival time in the shorter survival group. Two kinds of between-group contrast estimators (the difference in RMST and the ratio of RMST) are computed: Uno et al(2014)<doi:10.1200/JCO.2014.55.2208>, Uno et al(2022)<https://CRAN.R-project.org/package=survRM2>, Ueno and Morita(2023)<doi:10.1007/s43441-022-00484-z>.