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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
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r-rcmdrplugin-dccv 0.2-0
Propagated dependencies: r-rcmdr@2.9-5 r-isocodes@2025.05.18 r-dcchoice@0.2.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://sites.google.com/view/r4sp/rcmdrplugin
Licenses: GPL 2+
Build system: r
Synopsis: R Commander Plug-in for Dichotomous Choice Contingent Valuation
Description:

Adds menu items to the R Commander for parametric analysis of dichotomous choice contingent valuation (DCCV) data. CV is a question-based survey method to elicit individuals preferences for goods and services. This package depends on functions regarding parametric DCCV analysis in the package DCchoice. See Carson and Hanemann (2005) <doi:10.1016/S1574-0099(05)02017-6> for DCCV.

r-variantfiltering 1.46.0
Propagated dependencies: r-annotationdbi@1.72.0 r-biobase@2.70.0 r-biocgenerics@0.56.0 r-biocparallel@1.44.0 r-biostrings@2.78.0 r-bsgenome@1.78.0 r-dt@0.34.0 r-genomeinfodb@1.46.0 r-genomicfeatures@1.62.0 r-genomicranges@1.62.0 r-genomicscores@2.22.0 r-graph@1.88.0 r-gviz@1.54.0 r-iranges@2.44.0 r-rbgl@1.86.0 r-rsamtools@2.26.0 r-s4vectors@0.48.0 r-seqinfo@1.0.0 r-shiny@1.11.1 r-shinyjs@2.1.0 r-shinythemes@1.2.0 r-shinytree@0.3.1 r-summarizedexperiment@1.40.0 r-variantannotation@1.56.0 r-xvector@0.50.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/rcastelo/VariantFiltering
Licenses: Artistic License 2.0
Build system: r
Synopsis: Filtering of coding and non-coding genetic variants
Description:

Filter genetic variants using different criteria such as inheritance model, amino acid change consequence, minor allele frequencies across human populations, splice site strength, conservation, etc.

emacs-rainbow-mode 1.0.6
Channel: guix
Location: gnu/packages/emacs-xyz.scm (gnu packages emacs-xyz)
Home page: https://elpa.gnu.org/packages/rainbow-mode.html
Licenses: GPL 3+
Build system: emacs
Synopsis: Colorize color names in buffers
Description:

This minor mode sets background color to strings that match color names, e.g., #0000ff is displayed in white with a blue background.

ruby-method-source 1.0.0
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/banister/method_source
Licenses: Expat
Build system: ruby
Synopsis: Retrieve the source code for Ruby methods
Description:

Method_source retrieves the source code for Ruby methods. Additionally, it can extract source code from Proc and Lambda objects or just extract comments.

r-varianttoolsdata 1.34.0
Propagated dependencies: r-variantannotation@1.56.0 r-genomicranges@1.62.0 r-biocgenerics@0.56.0
Channel: guix-bioc
Location: guix-bioc/packages/v.scm (guix-bioc packages v)
Home page: https://bioconductor.org/packages/VariantToolsData
Licenses: Artistic License 2.0
Build system: r
Synopsis: Data for the VariantTools tutorial
Description:

Data from the sequencing of a 50/50 mixture of HapMap trio samples NA12878 (CEU) and NA19240 (YRI), subset to the TP53 region.

r-rcppnloptexample 0.0.2
Propagated dependencies: r-rcpp@1.1.0 r-nloptr@2.2.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/eddelbuettel/rcppnloptexample
Licenses: GPL 2+
Build system: r
Synopsis: 'Rcpp' Package Illustrating Header-Only Access to 'NLopt'
Description:

An example package which shows use of NLopt functionality from C++ via Rcpp without requiring linking, and relying just on nloptr thanks to the exporting API added there by Jelmer Ypma. This package is a fully functioning, updated, and expanded version of the initial example by Julien Chiquet at <https://github.com/jchiquet/RcppArmadilloNLoptExample> also containing a large earlier pull request of mine.

renpy-the-question 8.5.0
Dependencies: bash-minimal@5.2.37 python@3.11.14 python-pefile@2024.8.26 python-requests@2.32.5 python-renpy@8.5.0 python-six@1.17.0 python@3.11.14 xdg-utils@1.2.1
Channel: guix
Location: gnu/packages/game-development.scm (gnu packages game-development)
Home page: https://www.renpy.org/
Licenses: Expat
Build system: renpy
Synopsis: Example visual novel
Description:

The Question is a short example visual novel showing that your Ren'py installation works, similar to a "Hello World" program in other programming languages.

r-seq2pathway-data 1.42.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/seq2pathway.data
Licenses: GPL 2+
Build system: r
Synopsis: data set for R package seq2pathway
Description:

Supporting data for the seq2patheway package. Includes modified gene sets from MsigDB and org.Hs.eg.db; gene locus definitions from GENCODE project.

r-didmultiplegtdyn 2.3.0
Propagated dependencies: r-sandwich@3.1-1 r-rnames@1.0.1 r-rcpp@1.1.0 r-openxlsx@4.2.8.1 r-matlib@1.0.1 r-mass@7.3-65 r-lmtest@0.9-40 r-haven@2.5.5 r-ggplot2@4.0.1 r-fixest@0.13.2 r-dplyr@1.1.4 r-data-table@1.17.8 r-cowplot@1.2.0 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/Credible-Answers/did_multiplegt_dyn
Licenses: Expat
Build system: r
Synopsis: Estimation in Difference-in-Difference Designs with Multiple Groups and Periods
Description:

Estimation of heterogeneity-robust difference-in-differences estimators, with a binary, discrete, or continuous treatment, in designs where past treatments may affect the current outcome.

r-troubblme4solver 0.1.4
Propagated dependencies: r-reformulas@0.4.2 r-lme4@1.1-37
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://gitlab.com/iagogv/troubblme4solver
Licenses: GPL 3
Build system: r
Synopsis: Troubles Solver for 'lme4'
Description:

The main function of the package aims to update lmer()'/'glmer() models depending on their warnings, so trying to avoid convergence and singularity problems.

trezord-udev-rules 0.0.0-0.bff7fdf
Channel: guix
Location: gnu/packages/finance.scm (gnu packages finance)
Home page: https://github.com/trezor/trezor-common
Licenses: LGPL 3+
Build system: copy
Synopsis: Udev rules for trezord
Description:

This contains the udev rules for trezord. This will let a user run trezord as a regular user instead of needing to it run as root.

font-google-roboto 3.011
Channel: guix
Location: gnu/packages/fonts.scm (gnu packages fonts)
Home page: https://github.com/googlefonts/roboto-3-classic
Licenses: SIL OFL 1.1
Build system: font
Synopsis: The Roboto family of fonts
Description:

Roboto is Google’s signature family of fonts, the default font on Android and Chrome OS, and the recommended font for the visual language "Material Design".

ecl-trivial-raw-io 0.0.2-1.b1a3c87
Dependencies: ecl-alexandria@1.4-0.009b7e5
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/kingcons/trivial-raw-io
Licenses: FreeBSD
Build system: asdf/ecl
Synopsis: Trivial portability for raw *nix IO in Common Lisp
Description:

This library exports three symbols: with-raw-io, read-char, and read-line, to provide raw POSIX I/O in Common Lisp.

ruby-activesupport 7.2.2.1
Propagated dependencies: ruby-benchmark@0.4.0 ruby-concurrent-ruby@1.3.5 ruby-connection-pool@2.4.1 ruby-i18n@1.13.0 ruby-minitest@5.19.0 ruby-msgpack@1.7.5 ruby-securerandom@0.4.1 ruby-tzinfo@2.0.6-0.5cfebcb ruby-tzinfo-data@1.2025.2
Channel: guix
Location: gnu/packages/rails.scm (gnu packages rails)
Home page: https://rubyonrails.org/
Licenses: Expat
Build system: ruby
Synopsis: Ruby on Rails utility library
Description:

ActiveSupport is a toolkit of support libraries and Ruby core extensions extracted from the Rails framework. It includes support for multibyte strings, internationalization, time zones, and testing.

r-azureappinsights 0.3.1
Propagated dependencies: r-shiny@1.11.1 r-rlang@1.1.6 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=AzureAppInsights
Licenses: Expat
Build system: r
Synopsis: Include Azure Application Insights in Shiny Apps
Description:

Imports Azure Application Insights for web pages into Shiny apps via Microsoft's JavaScript snippet. Allows app developers to submit page tracking and submit events.

r-featurecormatrix 0.4.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=featureCorMatrix
Licenses: GPL 2+
Build system: r
Synopsis: Measurement Level Independent Feature Correlation Matrix
Description:

Uses three different correlation coefficients to calculate measurement-level adequate correlations in a feature matrix: Pearson product-moment correlation coefficient, Intraclass correlation and Cramer's V.

r-mlr3superlearner 0.1.2
Propagated dependencies: r-purrr@1.2.0 r-mlr3learners@0.13.0 r-mlr3@1.2.0 r-lgr@0.5.0 r-glmnet@4.1-10 r-data-table@1.17.8 r-cli@3.6.5 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mlr3superlearner
Licenses: GPL 3+
Build system: r
Synopsis: Super Learner Fitting and Prediction
Description:

An implementation of the Super Learner prediction algorithm from van der Laan, Polley, and Hubbard (2007) <doi:10.2202/1544-6115.1309 using the mlr3 framework.

r-sensitivity2x2xk 1.01
Propagated dependencies: r-mvtnorm@1.3-3 r-biasedurn@2.0.12
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sensitivity2x2xk
Licenses: GPL 2
Build system: r
Synopsis: Sensitivity Analysis for 2x2xk Tables in Observational Studies
Description:

This package performs exact or approximate adaptive or nonadaptive Cochran-Mantel-Haenszel-Birch tests and sensitivity analyses for one or two 2x2xk tables in observational studies.

r-sdtm-terminology 2025-3-25
Propagated dependencies: r-tibble@3.3.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/patterninstitute/sdtm.terminology
Licenses: FSDG-compatible
Build system: r
Synopsis: CDISC SDTM Controlled Terminology
Description:

Clinical Data Interchange Standards Consortium (CDISC) Standard Data Tabulation Model (SDTM) controlled terminology, 2025-03-25. Source: <https://evs.nci.nih.gov/ftp1/CDISC/SDTM/>.

r-raggedexperiment 1.34.0
Propagated dependencies: r-biocbaseutils@1.12.0 r-biocgenerics@0.56.0 r-genomicranges@1.62.0 r-iranges@2.44.0 r-matrix@1.7-4 r-matrixgenerics@1.22.0 r-s4vectors@0.48.0 r-seqinfo@1.0.0 r-summarizedexperiment@1.40.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/RaggedExperiment
Licenses: Artistic License 2.0
Build system: r
Synopsis: Representation of sparse experiments and assays across samples
Description:

This package provides a flexible representation of copy number, mutation, and other data that fit into the ragged array schema for genomic location data. The basic representation of such data provides a rectangular flat table interface to the user with range information in the rows and samples/specimen in the columns. The RaggedExperiment class derives from a GRangesList representation and provides a semblance of a rectangular dataset.

r-annotationfilter 1.34.0
Propagated dependencies: r-genomicranges@1.62.0 r-lazyeval@0.2.2
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/Bioconductor/AnnotationFilter
Licenses: Artistic License 2.0
Build system: r
Synopsis: Facilities for filtering Bioconductor annotation resources
Description:

This package provides classes and other infrastructure to implement filters for manipulating Bioconductor annotation resources. The filters are used by ensembldb, Organism.dplyr, and other packages.

r-clusterstability 1.0.4
Propagated dependencies: r-weightedcluster@2.0 r-rcpp@1.1.0 r-copula@1.1-6 r-cluster@2.1.8.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=ClusterStability
Licenses: GPL 3
Build system: r
Synopsis: Assessment of Stability of Individual Objects or Clusters in Partitioning Solutions
Description:

Allows one to assess the stability of individual objects, clusters and whole clustering solutions based on repeated runs of the K-means and K-medoids partitioning algorithms.

r-sonicscrewdriver 0.0.7
Propagated dependencies: r-tuner@1.4.7 r-suncalc@0.5.1 r-stringi@1.8.7 r-seewave@2.2.4 r-rdpack@2.6.4 r-mime@0.13 r-jsonlite@2.0.0 r-hms@1.1.4 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://sonicscrewdriver.ebaker.me.uk
Licenses: GPL 3
Build system: r
Synopsis: Bioacoustic Analysis and Publication Tools
Description:

This package provides tools for manipulating sound files for bioacoustic analysis, and preparing analyses these for publication. The package validates that values are physically possible wherever feasible.

r-bivariateleaflet 0.1.0
Propagated dependencies: r-sf@1.0-23 r-rlang@1.1.6 r-leaflet@2.2.3 r-htmltools@0.5.8.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bivariateLeaflet
Licenses: Expat
Build system: r
Synopsis: Create Bivariate Choropleth Maps with 'Leaflet'
Description:

This package creates bivariate choropleth maps using Leaflet'. This package provides tools for visualizing the relationship between two variables through a color matrix representation on an interactive map.

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