New tools for post-selection inference, for use with forward stepwise regression, least angle regression, the lasso, and the many means problem. The lasso function implements Gaussian, logistic and Cox survival models.

The visualization tool offers a nuanced understanding of regression dynamics, going beyond traditional per-unit interpretation of continuous variables versus categorical ones. It highlights the impact of unit changes as well as larger shifts like interquartile changes, acknowledging the distribution of empirical data. Furthermore, it generates visualizations depicting alterations in Odds Ratios for predictors across minimum, first quartile, median, third quartile, and maximum values, aiding in comprehending predictor-outcome interplay within empirical data distributions, particularly in logistic regression frameworks.

pyramid_retry is an execution policy for Pyramid that wraps requests and can retry them a configurable number of times under certain "retryable" error conditions before indicating a failure to the client.

Perform post hoc analysis based on residuals of Pearson's Chi-squared Test for Count Data based on T. Mark Beasley & Randall E. Schumacker (1995) <doi: 10.1080/00220973.1995.9943797>.

This package provides a set of Study Data Tabulation Model (SDTM) datasets constructed by modifying the pharmaversesdtm package to meet J&J Innovative Medicine's standard data structure for Clinical and Statistical Programming.

This package contains data for the ChIPexoQual package, consisting of 3 chromosome 1 aligned reads from a ChIP-exo experiment for FoxA1 in mouse liver cell lines aligned to the mm9 genome.

shoulda-context is the context framework extracted from Shoulda. Instead of writing Ruby methods with lots_of_underscores, shoulda-context adds context, setup, and should blocks combine to produce natural test method names.

This package provides methods for data analysis from an entropic perspective. These methods are nonparametric and perform well on non-ordinal data. Currently includes HeatMap() for visualizing distributional characteristics among multiple populations (groups).

SonVariantsChr21 is a dataset of annotated genomic variants coming from Complete Genomics whole genome sequencing. Data comes from GIAB project, Ashkenazim Trio, sample HG002 run 1. Both vcf and annotated data frame are provided.

This package provides a graphical user interface for simulating the effects of mergers, tariffs, and quotas under an assortment of different economic models. The interface is powered by the Shiny web application framework from RStudio'.

The clojure.tools.reader library offers all functionality provided by the Clojure Core reader and more. It adds metadata such as column and line numbers not only to lists, but also to symbols, vectors and maps.

This package provides a set of predicates and assertions for checking the properties of matrices. This is mainly for use by other package developers who want to include run-time testing features in their own packages.

This package provides Some of the most important evaluation measures for evaluating a model. Just by giving the real and predicted class, measures such as accuracy, sensitivity, specificity, ppv, npv, fmeasure, mcc and ... will be returned.

Computes the probability density function, the cumulative distribution function, the hazard rate function, the quantile function and random generation for Lindley Power Series distributions, see Nadarajah and Si (2018) <doi:10.1007/s13171-018-0150-x>.

This package package contains libraries to interface to EGL, mmal, GLESv2, vcos, openmaxil, vchiq_arm, bcm_host, VFC and OpenVG. It also provides the dtmerge, dtoverlay, dtparam, raspivid and tvservice commands, among others.

This package provides a tool to create Calibration References Data System-formatted reference files for James Webb Space Telescope from a set of input dark current files and a set of flat field files.

U-Boot is a bootloader used mostly for ARM boards. It also initializes the boards (RAM etc).

This is a 32-bit build of U-Boot.

This package only contains the file u-boot.bin.

U-Boot is a bootloader used mostly for ARM boards. It also initializes the boards (RAM etc).

This is a 32-bit build of U-Boot.

This package only contains the file u-boot.bin.

This package includes mappings information between different types of Illumina IDs of Illumina Mouse chips and nuIDs. It also includes mappings of all nuIDs included in Illumina Mouse chips to RefSeq IDs with mapping qualities information.

This package includes mappings information between different types of Illumina IDs of Illumina Human chips and nuIDs. It also includes mappings of all nuIDs included in Illumina Human chips to RefSeq IDs with mapping qualities information.

This is an R/shiny package to perform functional enrichment analysis for microbiome data. This package was based on clusterProfiler. Moreover, MicrobiomeProfiler support KEGG enrichment analysis, COG enrichment analysis, Microbe-Disease association enrichment analysis, Metabo-Pathway analysis.

Support functions for R-based "EQUALCompareImages - Compare similarity between and within images" shiny application which allow researchers without coding skills or expertise in image comparison algorithms to compare images. Gurusamy,K (2025)<doi:10.5281/zenodo.16994047>.

Calculate similarity between ontological terms and sets of ontological terms based on term information content and assess statistical significance of similarity in the context of a collection of terms sets - Greene et al. 2017 <doi:10.1093/bioinformatics/btw763>.

Facilitates efficient polygon search using kd trees. Coordinate level spatial data can be aggregated to higher geographical identities like census blocks, ZIP codes or police district boundaries. This process requires mapping each point in the given data set to a particular identity of the desired geographical hierarchy. Unless efficient data structures are used, this can be a daunting task. The operation point.in.polygon() from the package sp is computationally expensive. Here, we exploit kd-trees as efficient nearest neighbor search algorithm to dramatically reduce the effective number of polygons being searched.