This package provides an R and shiny interface to the Web Awesome component library. The package is generator-driven, exposing Web Awesome web components as R functions that produce HTML tags and integrate with the reactive model that shiny uses.
Detects perceptions of warmth and competence in American English self-presentation language. Using trained elastic net regression models, this package provides a numerical representation of warmth and competence perceptions. Methods are described here:<https://github.com/bushraguenoun/warmthcompetence/tree/master/paper>.
This package provides a comprehensive tool for converting and retrieving the miRNA Name, Accession, Sequence, Version, History and Family information in different miRBase versions. It can process a huge number of miRNAs in a short time without other depends.
For those wishing to interact with the Charles Schwab Individual Trader API (<https://developer.schwab.com/products/trader-api--individual>) with R in a simplified manner, this package offers wrapper functions around authentication and the available API calls to streamline the process.
This package provides tools to generate synthetic patient-level test datasets in the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM). Includes a chat-driven generator backed by large language models and an interactive shiny designer for editing CDM test sets.
Unlike other tools that dynamically link to the Cairo stack, freetypeharfbuzz is statically linked to specific versions of the FreeType and harfbuzz libraries. This ensures deterministic computation of text box extents for situations where reproducible results are crucial (for instance unit tests of graphics).
This package is a collection of search spaces for hyperparameter optimization in the mlr3 ecosystem. It features ready-to-use search spaces for many popular machine learning algorithms. The search spaces are from scientific articles and work for a wide range of data sets.
This package allows simple reflection of expressions containing variables. Reflection here means that a Haskell expression is turned into a string. The primary aim of this package is teaching and understanding; there are no options for manipulating the reflected expressions beyond showing them.
The reform2_lpc module allows for interaction with the NXP LPC11U24 Cortex-M0 MCU system controller in the Reform 2 open hardware laptop. It provides battery status information and is necessary to completely shut down the system when powering it off via userspace.
When writing a large manuscript, it is sometimes beneficial to repeat a theorem (or lemma or...) at an earlier or later point for didactic purposes. Unlike thmtools, this package allows replicating theorems not only in the same document, but in any other file.
Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the frma package.
This package provides tools to create a layout for figures made of multiple panels, and to fill the panels with base, lattice', ggplot2 and ComplexHeatmap plots, grobs, as well as content from all image formats supported by ImageMagick (accessed through magick').
Defines a graphics device and functions for graphical output in terminal emulators that support graphical output. Currently terminals that support the Terminal Graphics Protocol (<https://sw.kovidgoyal.net/kitty/graphics-protocol/>) and terminal supporting Sixel (<https://en.wikipedia.org/wiki/Sixel>) are supported.
This package provides functions for making contour plots. The contour plot can be created from grid data, a function, or a data set. If non-grid data is given, then a Gaussian process is fit to the data and used to create the contour plot.
This Python library is a wrapper around tokenize from the Python standard library. It provides two additional tokens ESCAPED_NL and UNIMPORTANT_WS, and a Token data type. Use src_to_tokens and tokens_to_src to roundtrip.
The package generalises the macro patching commands provided by P. Lehmann's etoolbox. The difference between this package and its sibling xpatch is that this package sports a very powerful \regexpatchcmd based on the l3regex module of the LaTeX3 experimental packages.
This package contains pre-built human (GPL571) databases of gene expression profiles. The gene expression data was downloaded from NCBI GEO and preprocessed and normalized consistently. The biological context of each sample was recorded and manually verified based on the sample description in GEO.
DeeDeeExperiment is an S4 class extending the SingleCellExperiment class, designed to integrate and manage omics analysis results. It introduces two dedicated slots to store Differential Expression Analysis (DEA) results and Functional Enrichment Analysis (FEA) results, providing a structured approach for downstream analysis.
Fits mixtures of multivariate contaminated normal distributions (with eigen-decomposed scale matrices) via the expectation conditional- maximization algorithm under a clustering or classification paradigm Methods are described in Antonio Punzo, Angelo Mazza, and Paul D McNicholas (2018) <doi:10.18637/jss.v085.i10>.
This package provides tools for simplifying the creation and management of data structures suitable for dealing with policy portfolios, that is, two-dimensional spaces of policy instruments and policy targets. The package also allows to generate measures of portfolio characteristics and facilitates their visualization.
Modelling structural zeros in compositional data using a conditional logistic normal model as described by Aitchison (1986), where MLE (Maximum Likelihood Estimation) is performed via the EM (Expectation-Maximization) algorithm. The relevant paper is Alzeley and Tsagris (2026) <doi:10.48550/arXiv.2608.29954>.
Supervised classification methods, which (if asked) can provide step-by-step explanations of the algorithms used, as described in PK Josephine et. al., (2021) <doi:10.59176/kjcs.v1i1.1259>; and datasets to test them on, which highlight the strengths and weaknesses of each technique.
repl-utilities is a set of utilities which ease life at the REPL. It includes three sorts of features: introspective procedures, miscellaneous utility functions, and, pulling them together, methods to conveniently keep these symbols and optionally additional symbols available in whichever package you switch to.
Save Biostrings objects to file artifacts, and load them back into memory. This is a more portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.