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r-healthycontrolspresencechecker 1.14.0
Propagated dependencies: r-xml2@1.5.0 r-magrittr@2.0.4 r-geoquery@2.78.0 r-geneexpressionfromgeo@1.3
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://github.com/davidechicco/healthyControlsPresenceChecker
Licenses: GPL 3
Build system: r
Synopsis: Dowloads A Gene Expression Dataset From GEO And Checks If It Contains Data Of Healthy Controls Or Not
Description:

This package provides a function that reads in the GEO accession code of a gene expression dataset, retrieves its data from GEO, and checks if data of healthy controls are present in the dataset. It returns true if healthy controls data are found, and false otherwise. GEO: Gene Expression Omnibus. ID: identifier code. The GEO datasets are downloaded from the URL <https://ftp.ncbi.nlm.nih.gov/geo/series/>.

r-ispyardswinprobabilitygsdesign 0.1.0
Propagated dependencies: r-dfba@0.1.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=ISPYARDSWinProbabilityGSDesign
Licenses: GPL 2
Build system: r
Synopsis: Trial Design in Respiratory Disease Based on the Win Probability
Description:

This package provides analysis results and trial simulation functions for the I-SPY Acute Respiratory Disease Syndrome trial based on composite ranked outcomes. The composite ranked outcome is a hierarchical outcome where trial participants are ranked first by 28 day mortality, then ventilator days, then by advanced respiratory support days. A Bayesian win probability approach is used for analysis. Trial design options include group sequential looks for safety, superiority, futility, and adjustment of randomization probabilities.

java-apache-xml-commons-resolver 1.2
Dependencies: java-junit@4.12
Channel: guix
Location: gnu/packages/java-xml.scm (gnu packages java-xml)
Home page: https://xerces.apache.org/xml-commons/
Licenses: ASL 2.0
Build system: ant
Synopsis: Catalog-based entity and URI resolution
Description:

The resolver class implements the full semantics of OASIS Technical Resolution 9401:1997 (Amendment 2 to TR 9401) catalogs and the 06 Aug 2001 Committee Specification of OASIS XML Catalogs.

It also includes a framework of classes designed to read catalog files in a number of formats:

  • The plain-text flavor described by TR9401.

  • The XCatalog XML format defined by John Cowan

  • The XML Catalog format defined by the OASIS Entity Resolution Technical Committee.

go-github-com-ryszard-goskiplist 0.0.0-20150312221310-2dfbae5fcf46
Channel: guix
Location: gnu/packages/golang-xyz.scm (gnu packages golang-xyz)
Home page: https://github.com/ryszard/goskiplist
Licenses: ASL 2.0
Build system: go
Synopsis: Skip list implementation in Golang
Description:

This is a library implementing skip lists as first described in Skip lists: a probabilistic alternative to balanced trees for the Go programming language.

Skip lists are a data structure that can be used in place of balanced trees. Skip lists use probabilistic balancing rather than strictly enforced balancing and as a result the algorithms for insertion and deletion in skip lists are much simpler and significantly faster than equivalent algorithms for balanced trees.

java-eclipse-rdf4j-repository-api 3.7.7
Dependencies: java-slf4j-api@1.7.25 java-commons-lang3@3.12.0
Propagated dependencies: java-eclipse-rdf4j-model@3.7.7 java-eclipse-rdf4j-rio-api@3.7.7 java-eclipse-rdf4j-query@3.7.7
Channel: guix
Location: gnu/packages/java-rdf.scm (gnu packages java-rdf)
Home page: https://rdf4j.org/
Licenses: EPL 1.0
Build system: ant
Synopsis: Interact with RDF repositories
Description:

This package provides an API for interacting with repositories of RDF data.

r-txdb-celegans-ucsc-ce11-refgene 3.4.6
Propagated dependencies: r-genomicfeatures@1.62.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Celegans.UCSC.ce11.refGene
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

r-txdb-hsapiens-ucsc-hg38-refgene 3.19.0
Propagated dependencies: r-genomicfeatures@1.62.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Hsapiens.UCSC.hg38.refGene
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

r-txdb-hsapiens-ucsc-hg19-refgene 3.22.0
Propagated dependencies: r-genomicfeatures@1.62.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Hsapiens.UCSC.hg19.refGene
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

r-bsgenome-mmulatta-ucsc-rhemac10 1.4.2
Propagated dependencies: r-bsgenome@1.78.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Mmulatta.UCSC.rheMac10
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full genome sequences for Macaca mulatta (UCSC version rheMac10)
Description:

Full genome sequences for Macaca mulatta (Rhesus) as provided by UCSC (rheMac10, Feb. 2019) and stored in Biostrings objects.

go-github-com-jpillora-requestlog 1.0.0
Dependencies: go-github-com-andrew-d-go-termutil@0.0.0-20150726205930-009166a695a2 go-github-com-tomasen-realip@0.0.0-20180522021738-f0c99a92ddce go-github-com-jpillora-ansi@1.0.2 go-github-com-jpillora-sizestr@20160129-1.e2ea2fa
Channel: guixrus
Location: guixrus/packages/common/go.scm (guixrus packages common go)
Home page: https://github.com/jpillora/requestlog
Licenses: Expat
Build system: go
Synopsis: Simple request logging in Go
Description:

Simple request logging in Go

emacs-message-attachment-reminder 20230124.520
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://github.com/alexmurray/message-attachment-reminder
Licenses:
Build system: melpa
Synopsis: Remind if missing attachment
Description:

Documentation at https://melpa.org/#/message-attachment-reminder

go-github-com-chris-ramon-douceur 0.2.0
Propagated dependencies: go-github-com-aymerick-douceur@0.2.0 go-github-com-gorilla-css@1.0.0
Channel: guix
Location: gnu/packages/golang-web.scm (gnu packages golang-web)
Home page: https://github.com/chris-ramon/douceur/
Licenses: Expat
Build system: go
Synopsis: CSS parser and inliner
Description:

This package provides a CSS parser and inliner.

go-github-com-ipfs-go-detect-race 0.0.1
Channel: guix
Location: gnu/packages/ipfs.scm (gnu packages ipfs)
Home page: https://github.com/ipfs/go-detect-race
Licenses: Expat
Build system: go
Synopsis: Detect if compiled with race
Description:

Check if the race detector is running.

r-clariomsrattranscriptcluster-db 8.8.0
Propagated dependencies: r-org-rn-eg-db@3.22.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/clariomsrattranscriptcluster.db
Licenses: Artistic License 2.0
Build system: r
Synopsis: Affymetrix clariomsrat annotation data (chip clariomsrattranscriptcluster)
Description:

Affymetrix clariomsrat annotation data (chip clariomsrattranscriptcluster) assembled using data from public repositories.

go-golang-org-rainycape-unidecode 0.0.0-1.cb7f23e
Channel: guix
Location: gnu/packages/golang-xyz.scm (gnu packages golang-xyz)
Home page: https://github.com/rainycape/unidecode
Licenses: ASL 2.0
Build system: go
Synopsis: Unicode transliterator in Golang
Description:

Unicode transliterator in Golang - Replaces non-ASCII characters with their ASCII approximations.

go-github-com-rcrowley-go-metrics 0.0.0-20250401214520-65e299d6c5c9
Propagated dependencies: go-github-com-stathat-go@1.0.0
Channel: guix
Location: gnu/packages/golang-web.scm (gnu packages golang-web)
Home page: https://github.com/rcrowley/go-metrics
Licenses: FreeBSD
Build system: go
Synopsis: Go port of Coda Hale's Metrics library
Description:

This package provides a Go implementation of Coda Hale's Metrics library.

perl-test-run-plugin-colorsummary 0.0203
Propagated dependencies: perl-test-run@0.0306 perl-test-run-cmdline@0.0132
Channel: guix
Location: gnu/packages/perl.scm (gnu packages perl)
Home page: https://metacpan.org/release/Test-Run-Plugin-ColorSummary
Licenses: X11
Build system: perl
Synopsis: Test::Run plugin that colors the summary
Description:

This package is a Test::Run plugin that colors the summary of the test output.

r-flowsorted-cordbloodnorway-450k 1.36.0
Propagated dependencies: r-minfi@1.56.0
Channel: guix-bioc
Location: guix-bioc/packages/f.scm (guix-bioc packages f)
Home page: https://bitbucket.com/kasperdanielhansen/Illumina_CordBlood
Licenses: Artistic License 2.0
Build system: r
Synopsis: Illumina HumanMethylation data on sorted cord blood cell populations
Description:

Raw data objects for the Illumina 450k DNA methylation microarrays, for cell type composition estimation.

clasp-curry-compose-reader-macros 1.0.0-0.beaa92d
Dependencies: clasp-alexandria@1.4-0.009b7e5 clasp-named-readtables@0.9-4.d5ff162
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://eschulte.github.io/curry-compose-reader-macros/
Licenses: Public Domain
Build system: asdf/clasp
Synopsis: Reader macros for partial application and composition
Description:

This Common Lisp library provides reader macros for concise expression of function partial application and composition.

r-txdb-celegans-ucsc-ce11-ensgene 3.15.0
Propagated dependencies: r-genomicfeatures@1.62.0 r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Celegans.UCSC.ce11.ensGene
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

python-robotframework-jsonlibrary 0.5
Propagated dependencies: python-jsonpath-ng@1.7.0 python-jsonschema@4.23.0 python-robotframework@7.3.2
Channel: guix
Location: gnu/packages/python-check.scm (gnu packages python-check)
Home page: https://github.com/robotframework-thailand/robotframework-jsonlibrary
Licenses: Unlicense
Build system: pyproject
Synopsis: Robot Framework test library for manipulating JSON Object
Description:

robotframework-jsonlibrary is a Robot Framework test library for manipulating JSON Object. You can manipulate your JSON object using JSONPath

r-bsgenome-dmelanogaster-ucsc-dm6 1.4.1
Propagated dependencies: r-bsgenome@1.78.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://www.bioconductor.org/packages/BSgenome.Dmelanogaster.UCSC.dm6/
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full genome sequences for Fly
Description:

This package provides full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm6) and stored in Biostrings objects.

go-github-com-dgraph-io-ristretto 1.0.1
Propagated dependencies: go-github-com-cespare-xxhash-v2@2.3.0 go-github-com-dgryski-go-farm@0.0.0-20200201041132-a6ae2369ad13 go-github-com-dustin-go-humanize@1.0.1 go-github-com-golang-glog@1.2.5 go-github-com-pkg-errors@0.9.1 go-golang-org-x-sys@0.37.0
Channel: guix
Location: gnu/packages/golang-xyz.scm (gnu packages golang-xyz)
Home page: https://github.com/dgraph-io/ristretto
Licenses: ASL 2.0 Expat
Build system: go
Synopsis: Memory-bound cache in Golang
Description:

Ristretto is a concurrent, fixed size, in-memory cache with a dual focus on throughput and hit ratio performance.

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