Native R implementation of EDGAR', the Experimental Design Generator and Randomiser. EDGAR was originally developed as a suite of Excel <https://www.microsoft.com/microsoft-365/excel> workbooks by the Biometrics team at Rothamsted Research <http://www.edgarweb.org.uk/>. The algorithms were subsequently re-implemented in the open-source Python <https://www.python.org/> project rotsl/edgar <https://rotsl.github.io/edgar/>, distributed as the edgar-design package on PyPI <https://pypi.org/project/edgar-design/>. This R package is a native R port of that Python implementation: it does not require Python', reticulate <https://CRAN.R-project.org/package=reticulate>, or any external service at runtime, and provides deterministic, reproducible randomisation for nine experimental designs including alpha designs (Patterson and Williams, 1976) <doi:10.1093/biomet/63.1.83>. Cross-language reproducibility with the Python implementation is achieved by porting the Mersenne Twister seeding implementation from CPython <https://github.com/python/cpython> and the Fisher-Yates shuffle to native R.
Allow parsing of object rest/spread
Parse regular expressions' unicodeSets (v) flag.
This package provides a wrapper round runit service status.
This package provides classes for handling SPARQL/JSON-based RDF queries.
This package trims the first components of the displayed filename to deal with excessively long ones.
This package provides bindings for CRIU. The code is based on the Go-based PHaul implementation from the CRIU repository.
This package provides bindings for CRIU. The code is based on the Go-based PHaul implementation from the CRIU repository.
This package provides bindings for CRIU. The code is based on the Go-based PHaul implementation from the CRIU repository.
Full genome sequences for Pan troglodytes (Chimp) as provided by UCSC (panTro3, Oct. 2010) and stored in Biostrings objects. The sequences are the same as in BSgenome.Ptroglodytes.UCSC.panTro3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Full genome sequences for Pan troglodytes (Chimp) as provided by UCSC (panTro2, Mar. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Ptroglodytes.UCSC.panTro2, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Compile inline regular expression modifiers
This package provides a moving average implementation for Go.
Add a __source prop to all JSX Elements
simple implementation of RFC1035 labels, used by dhcpv6 and dhcpv4
This package implements a IPNS over PubSub for libp2p.
This package provides a rpc Google's API gRPC type derived from google.golang.org/protobuf.
This package is part of the [React Native CLI](../../README.md). It contains commands for managing iOS part of React Native app.
Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg38, based on GRCh38.p12) with major allele injected from dbSNP151, and stored in Biostrings objects. Only single nucleotide variants (SNVs) were considered. At each SNV, the most frequent allele was chosen at the major allele to be injected into the reference genome.
Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg38, based on GRCh38.p12) with minor alleles injected from dbSNP151, and stored in Biostrings objects. Full genome sequences for Homo sapiens (Human) as provided by UCSC (hg38, based on GRCh38.p12) with minor alleles injected from dbSNP151, and stored in Biostrings objects. Only common single nucleotide variants (SNVs) with at least one alternate allele with frequency greater than 0.01 were considered. For SNVs with more than 1 alternate allele, the most frequent allele was chosen as the minor allele to be injected into the reference genome.
An annotation package for Illumina's EPIC methylation arrays.
Blackfriday is a Markdown processor in Go.