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This package provides a new inverse probability of selection weighted Cox model to deal with outcome-dependent sampling in survival analysis.
Computes Bayesian wavelet shrinkage credible intervals for nonparametric regression. The method uses cumulants to derive Bayesian credible intervals for wavelet regression estimates. The first four cumulants of the posterior distribution of the estimates are expressed in terms of the observed data and integer powers of the mother wavelet functions. These powers are closely approximated by linear combinations of wavelet scaling functions at an appropriate finer scale. Hence, a suitable modification of the discrete wavelet transform allows the posterior cumulants to be found efficiently for any data set. Johnson transformations then yield the credible intervals themselves. Barber, S., Nason, G.P. and Silverman, B.W. (2002) <doi:10.1111/1467-9868.00332>.
This package provides computational support for flow over weirs, such as sharp-crested, broad-crested, and embankments. Initially, the package supports broad- and sharp-crested weirs.
Explore data in the wpp2019 (or 2017, 2015, ...) package using a shiny interface.
In the course of a genome-wide association study, the situation often arises that some phenotypes are known with greater precision than others. It could be that some individuals are known to harbor more micro-environmental variance than others. In the case of inbred strains of model organisms, it could be the case that more organisms were observed from some strains than others, so the strains with more organisms have better-estimated means. Package wISAM handles this situation by allowing for weighting of each observation according to residual variance. Specifically, the weight parameter to the function conduct_scan() takes the precision of each observation (one over the variance).
This package provides a parallel implementation of Weighted Subspace Random Forest. The Weighted Subspace Random Forest algorithm was proposed in the International Journal of Data Warehousing and Mining by Baoxun Xu, Joshua Zhexue Huang, Graham Williams, Qiang Wang, and Yunming Ye (2012) <DOI:10.4018/jdwm.2012040103>. The algorithm can classify very high-dimensional data with random forests built using small subspaces. A novel variable weighting method is used for variable subspace selection in place of the traditional random variable sampling.This new approach is particularly useful in building models from high-dimensional data.
This method generates a tour path by interpolating between d-D frames in p-D using Givens rotations. The algorithm arises from the problem of zeroing elements of a matrix. This interpolation method is useful for showing specific d-D frames in the tour, as opposed to d-D planes, as done by the geodesic interpolation. It is useful for projection pursuit indexes which are not s invariant. See more details in Buj, Cook, Asimov and Hurley (2005) <doi:10.1016/S0169-7161(04)24014-7> and Batsaikhan, Cook and Laa (2023) <doi:10.48550/arXiv.2311.08181>.
Providing quantitative tools for input estimation, portfolio construction, and performance evaluation.
Efficiently read and write Waveform (WAV) audio files <https://en.wikipedia.org/wiki/WAV>. Support for unsigned 8 bit Pulse-code modulation (PCM), signed 12, 16, 24 and 32 bit PCM and other encodings.
This package provides a collection of utility functions, themes, and templates to support personal data analysis workflows. Includes functions for formatting numeric values as text, custom themes and color scales for ggplot2', and automatic formatting for tables created with gt'.
This package provides a collection of tools to fit and work with trophic Species Distribution Models. Trophic Species Distribution Models combine knowledge of trophic interactions with Bayesian structural equation models that model each species as a function of its prey (or predators) and environmental conditions. It exploits the topological ordering of the known trophic interaction network to predict species distribution in space and/or time, where the prey (or predator) distribution is unavailable. The method implemented by the package is described in Poggiato, Andréoletti, Pollock and Thuiller (2022) <doi:10.22541/au.166853394.45823739/v1>.
This package provides functions to compute Wasserstein barycenters of subset posteriors using the swapping algorithm developed by Puccetti, Rüschendorf and Vanduffel (2020) <doi:10.1016/j.jmaa.2017.02.003>. The Wasserstein barycenter is a geometric approach for combining subset posteriors. It allows for parallel and distributed computation of the posterior in case of complex models and/or big datasets, thereby increasing computational speed tremendously.
This package provides a clean syntax for vectorising the use of Non-Standard Evaluation (NSE), for example in ggplot2', dplyr', or data.table'.
This package provides a comprehensive toolbox for wavelet-domain quantile analyses of bivariate and multivariate time series. Provides Wavelet Quantile Regression and Multivariate Wavelet Quantile Regression after Adebayo and Ozkan (2024) <doi:10.1016/j.jclepro.2024.140832>, Wavelet Quantile-on-Quantile regression with bootstrap p-values extending Sim and Zhou (2015) <doi:10.1016/j.jbankfin.2015.01.013>, the nonparametric Causality-in-Quantiles test of Balcilar, Gupta and Pierdzioch (2016) <doi:10.1016/j.resourpol.2016.04.004> together with its wavelet variant, Wavelet Quantile Mediation and Moderation, Wavelet Quantile Correlation, and a wavelet-based nonparametric Quantile Density estimator. The Maximal Overlap Discrete Wavelet Transform (MODWT) decomposition is performed via waveslim and Short / Medium / Long band aggregation is supported throughout. For plain Quantile-on-Quantile regression see the companion CRAN package QuantileOnQuantile'. All interactive 3D surfaces, heatmaps and contour plots default to the MATLAB Parula colour map.
This package provides a Stata-style `webuse()` function for importing named datasets from Stata's online collection.
This package implements weighted double score matching (WDSM) for estimating population-level causal effects from complex survey data. Combines propensity scores and prognostic scores with survey design weights for matching, survey-weighted imputation within match sets, and Hajek normalization to target the population average treatment effect (PATE) and the population average treatment effect on the treated (PATT). Supports both retrospective (treatment-dependent) and prospective (treatment-independent) sampling designs. Uses propensity probabilities and arm-specific prognostic scores for matching, with a complete quadratic bias correction in each arm's double score. Provides linearization-based multinomial replication variance estimates and centered normal Wald confidence intervals, retaining the original matching reuse coefficients without re-matching. Supplied scores can be held fixed for inference conditional on those scores. This weight-only interface does not encode survey strata, clusters, or design-specific replicate weights.
Conducts single coefficient tests and multiple-contrast hypothesis tests of meta-regression models using cluster wild bootstrapping, based on methods examined in Joshi, Pustejovsky, and Beretvas (2022) <DOI:10.1002/jrsm.1554>.
Obtain information on peak flow data from the National River Flow Archive (NRFA) in the United Kingdom, either from the Peak Flow Dataset files <https://nrfa.ceh.ac.uk/data/peak-flow-dataset> once these have been downloaded to the user's computer or using the NRFA's API. These files are in a format suitable for direct use in the WINFAP software, hence the name of the package.
Estimation, simulation, hypothesis testing, AR-order selection, and forecasting for univariate higher-order stochastic volatility SV(p) models. Supports Gaussian, Student-t, and Generalized Error Distribution (GED) innovations, with optional leverage effects. Estimation uses closed-form Winsorized ARMA-SV (W-ARMA-SV) moment-based methods that avoid numerical optimization. Hypothesis testing includes Local Monte Carlo (LMC) and Maximized Monte Carlo (MMC) procedures for leverage effects, heavy tails, and autoregressive order. AR-order selection is also available via information criteria (BIC/AIC) using the Kalman-filter quasi-likelihood and the Hannan-Rissanen ARMA residual variance. Forecasting is based on Kalman filtering and smoothing. See Ahsan and Dufour (2021) <doi:10.1016/j.jeconom.2021.03.008>, Ahsan, Dufour, and Rodriguez-Rondon (2025) <doi:10.1111/jtsa.12851>, and Ahsan, Dufour, and Rodriguez-Rondon (2026) <doi:10.34989/swp-2026-8> for details.
Interface to the World Inequality Database (WID) API <https://wid.world>. Downloads distributional national accounts data with filters for country, year, percentile, age group, and population type. Includes code validation and reference tables. Independent implementation unaffiliated with the World Inequality Lab (WIL) or the Paris School of Economics.
This package provides a tool to fit and compare the wind turbine power curves with successful curve fitting techniques. Facilitates to examine and compare the performance of a user-defined power curve fitting techniques. Also, provide features to generate power curve discrete points from a graphical power curves. Data on the power curves of the wind turbine from major manufacturers are provided.
Taxonomic information from Wikipedia', Wikicommons', Wikispecies', and Wikidata'. Functions included for getting taxonomic information from each of the sources just listed, as well performing taxonomic search.
This package implements various win ratio methodologies for composite endpoints of death and non-fatal events, including the (stratified) proportional win-fractions (PW) regression models (Mao and Wang, 2020 <doi:10.1111/biom.13382>), (stratified) two-sample tests with possibly recurrent nonfatal event, and sample size calculation for standard win ratio test (Mao et al., 2021 <doi:10.1111/biom.13501>).
Estimates the Vevea and Hedges (1995) weight-function model. By specifying arguments, users can also estimate the modified model described in Vevea and Woods (2005), which may be more practical with small datasets. Users can also specify moderators to estimate a linear model. The package functionality allows users to easily extract the results of these analyses as R objects for other uses. In addition, the package includes a function to launch both models as a Shiny application. Although the Shiny application is also available online, this function allows users to launch it locally if they choose.