Represents high-dimensional data as tables of features, samples and measurements, and a design list for tracking the meaning of individual variables. Using this format, filtering, normalization, and other transformations of a dataset can be carried out in a flexible manner. romic takes advantage of these transformations to create interactive shiny apps for exploratory data analysis such as an interactive heatmap.
Routines to select and visualize the maxima for a given strict partial order. This especially includes the computation of the Pareto frontier, also known as (Top-k) Skyline operator (see Börzsönyi, et al. (2001) <doi:10.1109/ICDE.2001.914855>), and some generalizations known as database preferences (see Kieà ling (2002) <doi:10.1016/B978-155860869-6/50035-4>).
Calculates tide heights based on tide station harmonics. It includes the harmonics data for 637 US stations. The harmonics data was converted from <https://github.com/poissonconsulting/rtide/blob/main/data-raw/harmonics-dwf-20151227-free.tar.bz2>, NOAA web site data processed by David Flater for XTide'. The code to calculate tide heights from the harmonics is based on XTide'.
The TRIM model is widely used for estimating growth and decline of animal populations based on (possibly sparsely available) count data. The current package is a reimplementation of the original TRIM software developed at Statistics Netherlands by Jeroen Pannekoek. See <https://www.cbs.nl/en-gb/society/nature-and-environment/indices-and-trends%2d%2dtrim%2d%2d> for more information about TRIM.
Fit Class Cover Catch Digraph Classification models that can be used in machine learning. Pure and proper and random walk approaches are available. Methods are explained in Priebe et al. (2001) <doi:10.1016/S0167-7152(01)00129-8>, Priebe et al. (2003) <doi:10.1007/s00357-003-0003-7>, and Manukyan and Ceyhan (2016) <doi:10.48550/arXiv.1904.04564>
.
Designed for optimal use in performing fast, accurate walking strides segmentation from high-density data collected from a wearable accelerometer worn during continuous walking activity.
The BACCO bundle of packages is replaced by the BACCO package, which provides a vignette that illustrates the constituent packages (emulator, approximator, calibrator) in use.
Canonical correlation analysis and maximum correlation via projection pursuit, as well as fast implementations of correlation estimators, with a focus on robust and nonparametric methods.
S4 classes around infrastructure provided by the coda and dclone packages to make package development easy as a breeze with data cloning for hierarchical models.
Estimates fractional trophic level from quantitative and qualitative diet data and calculates electivity indices in R. Borstein (2020) <doi:10.1007/s10750-020-04417-5>.
Finds regular and chaotic intervals in the data using the 0-1 test for chaos proposed by Gottwald and Melbourne (2004) <DOI:10.1137/080718851>.
Convenience functions for implementing extended two-way fixed effect regressions a la Wooldridge (2021, 2023) <doi:10.2139/ssrn.3906345>, <doi:10.1093/ectj/utad016>.
This package provides a lightweight implementation of functions and methods for fast and fully automatic time series modeling and forecasting using Echo State Networks (ESNs).
This package provides tools for using genetic markers, stable isotope data, and habitat suitability data to calculate posterior probabilities of breeding origin of migrating birds.
The function gggap()
streamlines the creation of segments on the y-axis of ggplot2 plots which is otherwise not a trivial task to accomplish.
Interactively applies the Guidelines for Reporting About Network Data (GRAND) to an igraph object, and generates a uniform narrative or tabular description of the object.
Enables chat completion and text annotation with local and OpenAI
<https://openai.com/> language models, supporting batch processing, multiple annotators, and consistent output formats.
Fast extrapolation of univariate and multivariate time features using K-Nearest Neighbors. The compact set of hyper-parameters is tuned via grid or random search.
k Nearest Neighbors with variable selection, combine grid search and forward selection to achieve variable selection in order to improve k Nearest Neighbors predictive performance.
Computation of various Markovian models for categorical data including homogeneous Markov chains of any order, MTD models, Hidden Markov models, and Double Chain Markov Models.
This package contains logic for computing the statistical association of variable groups, i.e., gene sets, with respect to the principal components of genomic data.
This package provides functionality for Bayesian analysis of replication studies using power prior approaches (Pawel et al., 2023) <doi:10.1007/s11749-023-00888-5>.
This package provides the spatial sign correlation and the two-stage spatial sign correlation as well as a one-sample test for the correlation coefficient.
This package implements the Sliding Window Discrete Fourier Transform (SWDFT). Also provides statistical methods based on the SWDFT, and graphical tools to display the outputs.