For plant physiologists, converts conductance (e.g. stomatal conductance) to different units: m/s, mol/m^2/s, and umol/m^2/s/Pa.
Calculate taxonomic, functional and phylogenetic diversity measures through Hill Numbers proposed by Chao, Chiu and Jost (2014) <doi:10.1146/annurev-ecolsys-120213-091540>.
Web scraping the <https://www.dallasfed.org> for up-to-date data on international house prices and exuberance indicators. Download data in tidy format.
Handling, processing, and analyzing geographic data on species distributions and environmental variables. Read Vilela & Villalobos (2015) <doi:10.1111/2041-210X.12401> for details.
Quickly generate lorem ipsum placeholder text. Easy to integrate in RMarkdown documents. Includes an RStudio addin to insert lorem ipsum into the current document.
Summarize multiple biomarker responses of aquatic organisms to contaminants using Cliffâ s delta, as described in Pham & Sokolova (2023) <doi:10.1002/ieam.4676>.
This package provides functions to estimate start and duration of moult from moult data, based on models developed in Underhill and Zucchini (1988, 1990).
An S4 update of the mefa package using sparse matrices for enhanced efficiency. Sparse array-like objects are supported via lists of sparse matrices.
This package provides a method to impute the missingness in categorical data. Details see the paper <doi:10.4310/SII.2020.v13.n1.a2>.
To calculate the Minimal Clinically Important Difference by applying the Anchor-based method and the Response shift effect by applying the Then-Test method.
Estimates the multi-level vector autoregression model on time-series data. Three network structures are obtained: temporal networks, contemporaneous networks and between-subjects networks.
Calculates k-best solutions and costs for an assignment problem following the method outlined in Murty (1968) <doi:10.1287/opre.16.3.682>.
This package provides clustering of genes with similar dose response (or time course) profiles. It implements the method described by Lin et al. (2012).
The strip function deletes components of R model outputs that are useless for specific purposes, such as predict[ing], print[ing], summary[izing], etc.
Function library for processing collective movement data (e.g. fish schools, ungulate herds, baboon troops) collected from GPS trackers or computer vision tracking software.
Combine topic modeling and sentiment analysis to identify individual students gaps, and highlight their strengths and weaknesses across predefined competency domains and professional activities.
Density, distribution function, quantile function and random generation for the sum of independent non-identical binomial distribution with parameters \codesize and \codeprob.
Efficient regression analysis under general two-phase sampling, where Phase I includes error-prone data and Phase II contains validated data on a subset.
Reconstructs all possible raw data that could have led to reported summary statistics. Provides a wrapper for the Rust implementation of the CLOSURE algorithm.
This package provides tools for audio data analysis, including feature extraction, pitch detection, and speaker identification. Designed for voice research and signal processing applications.
Assortativity coefficients, centrality measures, and clustering coefficients for weighted and directed networks. Rewiring unweighted networks with given assortativity coefficients. Generating general preferential attachment networks.
The GNU/Linux distribution, a set of tools for managing development environments, home environments, and operating systems, a set of predefined configurations, practices and workflows.
Computes the influence functions time series of the returns for the risk and performance measures as mentioned in Chen and Martin (2018) <https://www.ssrn.com/abstract=3085672>, as well as in Zhang et al. (2019) <https://www.ssrn.com/abstract=3415903>. Also evaluates estimators influence functions at a set of parameter values and plots them to display the shapes of the influence functions.
Predicts statistics of a reference distribution from a mixture of raw clinical measurements (healthy and pathological). Uses pretrained CNN models to estimate the mean, standard deviation, and reference fraction from 1D or 2D sample data. Methods are described in LeBien, Velev, and Roche-Lima (2026) "RINet: synthetic data training for indirect estimation of clinical reference distributions" <doi:10.1016/j.jbi.2026.104980>.