Random shuffle implementation, on immutable lists. Based on perfect shuffle implementation by Oleg Kiselyov.

Test::Requires checks to see if the module can be loaded. If this fails, then rather than failing tests this skips all tests.

This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".

Filter genetic variants using different criteria such as inheritance model, amino acid change consequence, minor allele frequencies across human populations, splice site strength, conservation, etc.

This minor mode sets background color to strings that match color names, e.g., #0000ff is displayed in white with a blue background.

Method_source retrieves the source code for Ruby methods. Additionally, it can extract source code from Proc and Lambda objects or just extract comments.

Data from the sequencing of a 50/50 mixture of HapMap trio samples NA12878 (CEU) and NA19240 (YRI), subset to the TP53 region.

Supporting data for the seq2patheway package. Includes modified gene sets from MsigDB and org.Hs.eg.db; gene locus definitions from GENCODE project.

This contains the udev rules for trezord. This will let a user run trezord as a regular user instead of needing to it run as root.

Roboto is Google’s signature family of fonts, the default font on Android and Chrome OS, and the recommended font for the visual language "Material Design".

This library exports three symbols: with-raw-io, read-char, and read-line, to provide raw POSIX I/O in Common Lisp.

ActiveSupport is a toolkit of support libraries and Ruby core extensions extracted from the Rails framework. It includes support for multibyte strings, internationalization, time zones, and testing.

This package provides classes and other infrastructure to implement filters for manipulating Bioconductor annotation resources. The filters are used by ensembldb, Organism.dplyr, and other packages.

This package provides a flexible representation of copy number, mutation, and other data that fit into the ragged array schema for genomic location data. The basic representation of such data provides a rectangular flat table interface to the user with range information in the rows and samples/specimen in the columns. The RaggedExperiment class derives from a GRangesList representation and provides a semblance of a rectangular dataset.

MiniTest Moar add some additional features and changes some default behaviours in MiniTest. For instance, Moar replaces the MiniTest Object#stub with a global stub method.

Store UCSC RepeatMasker AnnotationHub resource metadata. Provide provenance and citation information for UCSC RepeatMasker AnnotationHub resources. Illustrate in a vignette how to access those resources.

This package provides a better error page for Rails and other Rack apps. Includes source code inspection, a live REPL and local/instance variable inspection for all stack frames.

OSGi, for Open Services Gateway initiative framework, is a module system and service platform for the Java programming language. This package contains the definition of common types in osgi packages.

queue_classic is a queuing library for Ruby applications (Rails, Sinatra, etc.) queue_classic features asynchronous job polling, database maintained locks and has a single dependency, pg.

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data. It controls FDR for multiple testing and utilizes the average read count and dispersion distributions from real data to estimate a more reliable sample size. It is also equipped with several unique features, including estimation for interested genes or pathway, power curve visualization, and parameter optimization.

The main aim of this package is to work on lists, especially with random operations. The hidden aim is to build a personal collection of exercises with different data for each pupil.

The randomwalk package provides a user command, \RandomWalk, to draw random walks with a given number of steps. Lengths and angles of the steps can be customized in various ways.

will_paginate provides a simple API for performing paginated queries with Active Record, DataMapper and Sequel, and includes helpers for rendering pagination links in Rails, Sinatra, Hanami, and Merb web apps.

This package provides a Python library that is an implementation of traditional readability measures based on simple surface characteristics. These measures are basically linear regressions based on the number of words, syllables, and sentences.