This is an R package providing additional capabilities and speed for GenomicRanges
operations.
This package provides functions for importing, exporting, plotting and other manipulations of bitmapped images.
This package implements generalized Deming regression, Theil-Sen regression and Passing-Bablock regression functions.
This package provides an R based genetic algorithm for binary and floating point chromosomes.
An Ogg decoder and encoder. Implements the xiph.org Ogg spec in pure Rust.
This package provides a PEG parser combinators using operator overloading without macros in Rust.
This package provides a way to interact with git repositories just like git would.
This package provides a way to interact with git repositories just like git would.
This package provides async HTTP and WebSocket client library built on the Actix ecosystem.
This package provides async HTTP and WebSocket client library built on the Actix ecosystem.
This package provides async HTTP and WebSocket client library built on the Actix ecosystem.
This package provides async HTTP and WebSocket client library built on the Actix ecosystem.
This is a Common Lisp wrapper for interacting with the Redis data structure store.
IRB is an interactive Ruby command-line tool for REPL (Read Eval Print Loop).
IRB is an interactive Ruby command-line tool for REPL (Read Eval Print Loop).
Download large sections of GenBank
<https://www.ncbi.nlm.nih.gov/genbank/> and generate a local SQL-based database. A user can then query this database using restez functions or through rentrez <https://CRAN.R-project.org/package=rentrez> wrappers.
This package provides a series of functions to call AD Model Builder (i.e., compile and run models) from within R, read the results back into R as admb objects, and provide standard accessors (i.e. coef()
, vcov()
, etc.).
R6 class interface for handling relational database connections using DBI package as backend. The class allows handling of connections to e.g. PostgreSQL
, MariaDB
and SQLite. The purpose is having an intuitive object allowing straightforward handling of SQL databases.
Random univariate and multivariate finite mixture model generation, estimation, clustering, latent class analysis and classification. Variables can be continuous, discrete, independent or dependent and may follow normal, lognormal, Weibull, gamma, Gumbel, binomial, Poisson, Dirac, uniform or circular von Mises parametric families.
This package provides a programmatic client for the eBird
database (<https://ebird.org/home>), including functions for searching for bird observations by geographic location (latitude, longitude), eBird
hotspots, location identifiers, by notable sightings, by region, and by taxonomic name.
This package provides a method for fitting the entire regularization path of the reluctant generalized additive model (RGAM) for linear regression, logistic, Poisson and Cox regression models. See Tay, J. K., and Tibshirani, R., (2019) <arXiv:1912.01808>
for details.
The Regional Vulnerability Index (RVI), a statistical measure of brain structural abnormality, quantifies an individual's similarity to the expected pattern (effect size) of deficits in schizophrenia (Kochunov P, Fan F, Ryan MC, et al. (2020) <doi:10.1002/hbm.25045>).
The minimum covariance determinant estimator is used to perform robust quadratic discriminant analysis, including cross-validation. References: Friedman J., Hastie T. and Tibshirani R. (2009). "The elements of statistical learning", 2nd edition. Springer, Berlin. <doi:10.1007/978-0-387-84858-7>.
This package provides a set of tools to extract bibliographic content from the National Center for Biotechnology Information (NCBI) databases, including PubMed. The name RISmed is a portmanteau of RIS (for Research Information Systems, a common tag format for bibliographic data) and PubMed.