_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


helm 3.0.2
Channel: gn-bioinformatics
Location: gn/packages/helm.scm (gn packages helm)
Home page: https://helm.sh/
Licenses: ASL 2.0
Build system: trivial
Synopsis: Kubernetes Package Manager
Description:

Helm is a tool for managing Kubernetes charts. Charts are packages of pre-configured Kubernetes resources. Use Helm to:

  1. Find and use popular software packaged as Helm charts to run in Kubernetes

  2. Share your own applications as Helm charts

  3. Create reproducible builds of your Kubernetes applications

  4. Intelligently manage your Kubernetes manifest files

  5. Manage releases of Helm packages

hyphy 2.5.0
Dependencies: curl@8.6.0 fftw-openmpi@3.3.10 openmpi@4.1.6 openssl@3.0.8 python2@2.7.18
Channel: gn-bioinformatics
Location: gn/packages/hyphy.scm (gn packages hyphy)
Home page: http://hyphy.org
Licenses: Expat
Build system: cmake
Synopsis: hyphy: an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning.
Description:

HyPhy is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It features a complete graphical user interface (GUI) and a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments (via message passing interface (MPI)) and it can be compiled as a shared library and called from other programming environments such as Python and R.

rtg-tools 3.11
Dependencies: bash-minimal@5.2.37 java-commons-collections@3.2.2 java-commons-compress@1.21 java-commons-lang@2.6 java-snappy@1.1.7.5
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: https://github.com/RealTimeGenomics/rtg-tools/
Licenses: FreeBSD
Build system: ant
Synopsis: Utilities for accurate VCF comparison and manipulation
Description:

RTG Tools is a subset of RTG Core that includes several useful utilities for dealing with VCF files and sequence data. Probably the most interesting is the vcfeval command which performs sophisticated comparison of VCF files.

maven 3.3.9
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: https://maven.apache.org/
Licenses: ASL 2.0
Build system: ant
Synopsis:
Description:

Apache Maven is a software project management and comprehension tool. Based on the concept of a project object model (POM), Maven can manage a project's build, reporting and documentation from a central piece of information.

commons-vfs 2.0
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: https://commons.apache.org/proper/commons-vfs/
Licenses: ASL 2.0
Build system: ant
Synopsis: Commons Virtual File System API for Java
Description:

Commons VFS provides a single API for accessing various different file systems. It presents a uniform view of the files from various different sources, such as the files on local disk, on an HTTP server, or inside a Zip archive.

xz-java 1.5
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: http://tukaani.org/xz/java.html
Licenses: Public Domain
Build system: ant
Synopsis: Implementation of XZ data compression in pure Java
Description:

This aims to be a complete implementation of XZ data compression in pure Java. Single-threaded streamed compression and decompression and random access decompression have been fully implemented.

jakarta-oro 2.0.8
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: http://jakarta.apache.org/oro/
Licenses: ASL 1.1
Build system: ant
Synopsis: Set of text-processing Java classes
Description:

The Jakarta-ORO Java classes are a set of text-processing Java classes that provide Perl5 compatible regular expressions, AWK-like regular expressions, glob expressions, and utility classes for performing substitutions, splits, filtering filenames, etc.

jsch 0.1.53
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: http://www.jcraft.com/jsch/
Licenses: Modified BSD
Build system: ant
Synopsis: JSch is a pure Java implementation of SSH2
Description:

JSch is a pure Java implementation of SSH2. JSch allows you to connect to an sshd server and use port forwarding, X11 forwarding, file transfer, etc., and you can integrate its functionality into your own Java programs.

ivy 2.4.0
Dependencies: nss-certs@3.101.4
Channel: gn-bioinformatics
Location: gn/packages/java.scm (gn packages java)
Home page: http://ant.apache.org/ivy/
Licenses: ASL 2.0
Build system: ant
Synopsis: Dependency manager for Ant
Description:

Apache Ivy is a popular dependency manager focusing on flexibility and simplicity.

js-popper 1.12.9
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://popper.js.org/
Licenses: Expat
Build system: minify
Synopsis: Tooltip and popover positioning engine
Description:

Given an element, such as a button, and a tooltip element describing it, Popper will automatically put the tooltip in the right place near the button.

javascript-cytoscape 3.17.1
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://js.cytoscape.org/
Licenses: Expat
Build system: trivial
Synopsis: Graph theory (network) library for visualisation and analysis
Description:

Cytoscape.js is a fully featured graph theory library. Do you need to model and/or visualise relational data, like biological data or social networks? If so, Cytoscape.js is just what you need.

Cytoscape.js contains a graph theory model and an optional renderer to display interactive graphs. This library was designed to make it as easy as possible for programmers and scientists to use graph theory in their apps, whether it's for server-side analysis in a Node.js app or for a rich user interface.

js-popper 2.0.6
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://popper.js.org/
Licenses: Expat
Build system: minify
Synopsis: Tooltip and popover positioning engine
Description:

Given an element, such as a button, and a tooltip element describing it, Popper will automatically put the tooltip in the right place near the button.

javascript-font-awesome v4.7.0
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://fontawesome.com/
Licenses: SIL OFL 1.1
Build system: trivial
Synopsis: Font that contains a rich iconset
Description:

Font Awesome is a full suite of pictographic icons for easy scalable vector graphics.

javascript-highlight 11.10.0
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://highlightjs.org/
Licenses: Modified BSD
Build system: trivial
Synopsis: Highlight.js is a syntax highlighter written in JavaScript.
Description:

JavaScript syntax highlighter with language auto-detection and zero dependencies.

javascript-d3js-multi 1.0.1
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://d3js.org/
Licenses: Modified BSD
Build system: trivial
Synopsis: Multi-value syntax for d3-selection and d3-transition
Description:

This module adds multi-value syntax to selections and transitions, allowing you to set multiple attributes, styles or properties simultaneously with more concise syntax.

javascript-datatables-2.2.2 2.2.2
Propagated dependencies: javascript-jquery-1.12.4@1.12.4
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://www.datatables.net/
Licenses: Expat
Build system: trivial
Synopsis: Tables plug-in for jQuery
Description:

DataTables is a table enhancing plug-in for the jQuery Javascript library, adding sorting, paging and filtering abilities to plain HTML tables with minimal effort.

javascript-canvas-toblob 0.0.0-1.f1a0189
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://github.com/eligrey/canvas-toBlob.js/
Licenses: Expat
Build system: trivial
Synopsis: canvas.toBlob() implementation
Description:

canvas-toBlob.js implements the standard HTML5 canvas.toBlob() and canvas.toBlobHD() methods in browsers that do not natively support it.

javascript-datatables-scroller-2.4.3 2.4.3
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://datatables.net/extensions/scroller/
Licenses: Expat
Build system: trivial
Synopsis: This package contains distribution files for the Scroller extension for DataTables. Only the core software for this library is contained in this package - to be correctly styled, a styling package for Scroller must also be included.
Description:

Scroller is a virtual rendering plug-in for DataTables which allows large datasets to be drawn on screen very quickly. Virtual rendering means is that only the visible portion of the table is drawn, while the scrolling container gives the visual impression that the whole table is visible, allowing excellent browser performance.

js-colorbox 1.4.36
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: http://www.jacklmoore.com/colorbox/
Licenses: Expat
Build system: minify
Synopsis: Lightweight customizable lightbox plugin for jQuery
Description:

Colorbox is a lightweight customizable lightbox plugin for jQuery.

javascript-nouislider 8.0.2
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://refreshless.com/nouislider/
Licenses: Expat
Build system: trivial
Synopsis: Javascript range slider
Description:

Nouislider is a lightweight JavaScript range slider with full touch support.

javascript-bootstrap 3.3.0
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://getbootstrap.com/
Licenses: Expat
Build system: trivial
Synopsis: Bootstrap web framework
Description:

Bootstrap is an open source toolkit for developing with HTML, CSS, and JS. Quickly prototype your ideas or build your entire app with our Sass variables and mixins, responsive grid system, extensive prebuilt components, and powerful plugins built on jQuery.

javascript-marked 9.1.5
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://marked.js.org/
Licenses: Expat
Build system: trivial
Synopsis: A markdown parser and compiler. Built for speed.
Description:

A low-level markdown compiler for parsing markdown without caching or blocking for long periods of time.

javascript-shapiro-wilk 1.0.0
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://stuk.github.io/jszip/
Licenses: Expat
Build system: trivial
Synopsis: Shapiro-Wilk Test in JavaScript (ported from R)
Description:

Shapiro-Wilk Test in JavaScript (ported from R)

javascript-datatables-buttons-bootstrap 1.6.2
Propagated dependencies: javascript-datatables@1.10.19
Channel: gn-bioinformatics
Location: gn/packages/javascript.scm (gn packages javascript)
Home page: https://datatables.net/extensions/buttons/
Licenses: Expat
Build system: trivial
Synopsis: This package contains distribution files required to style Buttons extension for DataTables with styling for Bootstrap.
Description:

The Buttons extension for DataTables provides a common set of options, API methods and styling to display buttons on a page that will interact with a DataTable. It also provides plug-ins for file export (HTML5 and Flash), print view and column visibility. Other libraries, such as Editor and Select also provide buttons specific to their use cases.

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Total results: 69264