We generate random variables following general Marchenko-Pastur distribution and Tracy-Widom distribution. We compute limits and distributions of eigenvalues and generalized components of spiked covariance matrices. We give estimation of all population eigenvalues of spiked covariance matrix model. We give tests of population covariance matrix. We also perform matrix denoising for signal-plus-noise model.

This package provides templates, formatting tools, and ggplot2 themes tailored for the Accessible Teaching, Learning, and Assessment Systems (ATLAS) organization. These templates facilitate the creation of topic guides and technical reports, while the formatting functions enable users to customize numbers and tables to meet specific requirements. Additionally, the themes ensure a uniform visual style across graphics.

This package provides functionality to group lines that form naturally continuous lines in a spatial network. The algorithm implemented is based on the Continuity in Street Networks (COINS) method from Tripathy et al. (2021) <doi:10.1177/2399808320967680>, which identifies continuous "strokes" in the network as the line strings that maximize the angles between consecutive segments.

Toolbox for chemometrics analysis of bidimensional gas chromatography data. This package import data for common scientific data format (NetCDF) and fold it to 2D chromatogram. Then, it can perform preprocessing and multivariate analysis. In the preprocessing algorithms, baseline correction, smoothing, and peak alignment are available. While in multivariate analysis, multiway principal component analysis is incorporated.

Rfastp is an R wrapper of fastp developed in c++. fastp performs quality control for fastq files. including low quality bases trimming, polyX trimming, adapter auto-detection and trimming, paired-end reads merging, UMI sequence/id handling. Rfastp can concatenate multiple files into one file (like shell command cat) and accept multiple files as input.

Access the Refuge API, a web-application for locating trans and intersex-friendly restrooms, including unisex and accessible restrooms. Includes data on the location of restrooms, along with directions, comments, user ratings and amenities. Coverage is global, but data is most comprehensive in the United States. See <https://www.refugerestrooms.org/api/docs/> for full API documentation.

Applies a given global-fit method to random partial tanglegrams of a fixed size to identify the associations, terminals, and nodes that maximize phylogenetic (in)congruence. It also includes functions to compute more easily the confidence intervals of classification metrics and plot results, reducing computational time. See Llaberia-Robledillo et al., (2023) <doi:10.1093/sysbio/syad016>.

RSVSim is a package for the simulation of deletions, insertions, inversion, tandem-duplications and translocations of various sizes in any genome available as FASTA-file or BSgenome data package. SV breakpoints can be placed uniformly accross the whole genome, with a bias towards repeat regions and regions of high homology (for hg19) or at user-supplied coordinates.

LLD is a high-performance linker, built as a set of reusable components which highly leverage existing libraries in the larger LLVM Project.

Computes asymmetric LD measures (ALD) for multi-allelic genetic data. These measures are identical to the correlation measure (r) for bi-allelic data.

Accurate point and interval estimation methods for multiple linear regression coefficients, under classical normal and independent error assumptions, taking into account variable selection.

Fast processing of ArcGIS FeatureCollection protocol buffers in R. It is designed to work seamlessly with httr2 and integrates with sf'.

Computations for Bessel function for complex, real and partly mpfr (arbitrary precision) numbers; notably interfacing TOMS 644; approximations for large arguments, experiments, etc.

Simulates clinical trials and summarizes causal effects and treatment policy estimands in the presence of intercurrent events in a transparent and intuitive manner.

This package provides functions that offer seamless D3Plus integration. The examples provided here are taken from the official D3Plus website <http://d3plus.org>.

Estimating individual-level covariate-outcome associations using aggregate data ("ecological inference") or a combination of aggregate and individual-level data ("hierarchical related regression").

Wrapper functions around the Facebook Marketing API to create, read, update and delete custom audiences, images, campaigns, ad sets, ads and related content.

Density, distribution function, quantile function and random generation for the Generalized Gamma proposed in Stacy, E. W. (1962) <doi:10.1214/aoms/1177704481>.

This package provides ggplot2 stats that estimate seasonally adjusted series and rolling summaries such as rolling average on the fly for time series.

Read examples with interlinear glosses from files or from text and print them in a way compatible with both Latex and HTML outputs.

This package provides functions for fitting various normal theory (growth curve) and elliptically-contoured repeated measurements models with ARMA and random effects dependence.

Collection of functions to help retrieving data from Hub'Eau the free and public French National APIs on water <https://hubeau.eaufrance.fr/>.

Extract and replace elements using indices that start from zero (rather than one), as is common in mathematical notation and other programming languages.

Estimates monotone regression and variance functions in a nonparametric model, based on Dette, Holger, Neumeyer, and Pilz (2006) <doi:10.3150/bj/1151525131>.