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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
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r-nhanes 2.1.0
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://cran.r-project.org/package=NHANES
Licenses: GPL 2+
Synopsis: Data from the US National Health and Nutrition Examination Study
Description:

Body Shape and related measurements from the US National Health and Nutrition Examination Survey (NHANES, 1999-2004). See http://www.cdc.gov/nchs/nhanes.htm for details.

r-nswgeo 0.5.0
Propagated dependencies: r-sf@1.0-21 r-cartographer@0.2.1
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://github.com/cidm-ph/nswgeo
Licenses: Expat
Synopsis: Geospatial Data and Maps for New South Wales, Australia
Description:

Geospatial data for creating maps of New South Wales (NSW), Australia, and some helpers to work with common problems like normalising postcodes. Registers its data with cartographer'.

r-packhv 2.4
Propagated dependencies: r-writexls@6.8.0 r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=packHV
Licenses: GPL 2+
Synopsis: few Useful Functions for Statisticians
Description:

Various useful functions for statisticians: describe data, plot Kaplan-Meier curves with numbers of subjects at risk, compare data sets, display spaghetti-plot, build multi-contingency tables...

r-pelvis 2.0.4
Propagated dependencies: r-shiny@1.10.0 r-mass@7.3-65 r-htmlwidgets@1.6.4 r-dt@0.33
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://gitlab.com/f-santos/pelvis/
Licenses: FSDG-compatible FSDG-compatible
Synopsis: Probabilistic Sex Estimate using Logistic Regression, Based on VISual Traits of the Human Os Coxae
Description:

An R-Shiny application implementing a method of sexing the human os coxae based on logistic regressions and Bruzek's nonmetric traits <doi:10.1002/ajpa.23855>.

r-pyinit 1.1.3
Propagated dependencies: r-robustbase@0.99-4-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/dakep/pyinit
Licenses: GPL 2+
Synopsis: Pena-Yohai Initial Estimator for Robust S-Regression
Description:

Deterministic Pena-Yohai initial estimator for robust S estimators of regression. The procedure is described in detail in Pena, D., & Yohai, V. (1999) <doi:10.2307/2670164>.

r-qpmadr 1.1.0-0
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.0.14 r-checkmate@2.3.2
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/anderic1/qpmadr
Licenses: GPL 3+
Synopsis: Interface to the 'qpmad' Quadratic Programming Solver
Description:

Efficiently solve quadratic problems with linear inequality, equality and box constraints. The method used is outlined in D. Goldfarb, and A. Idnani (1983) <doi:10.1007/BF02591962>.

r-semdrw 0.1.0
Propagated dependencies: r-shinyace@0.4.4 r-shiny@1.10.0 r-semtools@0.5-7 r-semplot@1.1.6 r-psych@2.5.3 r-lavaan@0.6-19 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=semdrw
Licenses: GPL 2
Synopsis: 'SEM Shiny'
Description:

Interactive shiny application for working with Structural Equation Modelling technique. Runtime examples are provided in the package function as well as at <https://kartikeyab.shinyapps.io/semwebappk/> .

r-socviz 1.2
Propagated dependencies: r-tibble@3.2.1 r-rlang@1.1.6 r-magrittr@2.0.3 r-fs@1.6.6 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: http://kjhealy.github.io/socviz/
Licenses: Expat
Synopsis: Utility Functions and Data Sets for Data Visualization
Description:

Supporting materials for a course and book on data visualization. It contains utility functions for graphs and several sample data sets. See Healy (2019) <ISBN 978-0691181622>.

r-sdsfun 0.8.1
Propagated dependencies: r-tibble@3.2.1 r-spdep@1.3-11 r-sf@1.0-21 r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14 r-purrr@1.0.4 r-pander@0.6.6 r-magrittr@2.0.3 r-geosphere@1.5-20 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://stscl.github.io/sdsfun/
Licenses: GPL 3
Synopsis: Spatial Data Science Complementary Features
Description:

Wrapping and supplementing commonly used functions in the R ecosystem related to spatial data science, while serving as a basis for other packages maintained by Wenbo Lv.

r-tlasso 1.0.2
Propagated dependencies: r-rtensor@1.4.9 r-igraph@2.1.4 r-huge@1.3.5 r-expm@1.0-0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=Tlasso
Licenses: GPL 2+
Synopsis: Non-Convex Optimization and Statistical Inference for Sparse Tensor Graphical Models
Description:

An optimal alternating optimization algorithm for estimation of precision matrices of sparse tensor graphical models, and an efficient inference procedure for support recovery of the precision matrices.

r-tidymc 1.0.1
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rlang@1.1.6 r-purrr@1.0.4 r-magrittr@2.0.3 r-kableextra@1.4.0 r-hms@1.1.3 r-ggplot2@3.5.2 r-future@1.49.0 r-furrr@0.3.1 r-dplyr@1.1.4 r-checkmate@2.3.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/stefanlinner/tidyMC
Licenses: Expat
Synopsis: Monte Carlo Simulations Made Easy and Tidy
Description:

Framework to run Monte Carlo simulations over a parameter grid. Allows to parallelize the simulations. Generates plots and LaTeX tables summarizing the results from the simulation.

r-vtable 1.4.8
Propagated dependencies: r-sjlabelled@1.2.0 r-rstudioapi@0.17.1 r-knitr@1.50 r-kableextra@1.4.0 r-haven@2.5.5
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://nickch-k.github.io/vtable/
Licenses: Expat
Synopsis: Variable Table for Variable Documentation
Description:

Automatically generates HTML variable documentation including variable names, labels, classes, value labels (if applicable), value ranges, and summary statistics. See the vignette "vtable" for a package overview.

r-varian 0.2.2
Propagated dependencies: r-rstan@2.32.7 r-mass@7.3-65 r-gridextra@2.3 r-ggplot2@3.5.2 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/ElkhartGroup/varian
Licenses: Expat
Synopsis: Variability Analysis in R
Description:

Uses a Bayesian model to estimate the variability in a repeated measure outcome and use that as an outcome or a predictor in a second stage model.

r-windex 2.1.0
Propagated dependencies: r-scatterplot3d@0.3-44 r-phytools@2.4-4 r-phangorn@2.12.1 r-geiger@2.0.11 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://cran.r-project.org/package=windex
Licenses: GPL 2
Synopsis: Analysing Convergent Evolution using the Wheatsheaf Index
Description:

Analysing convergent evolution using the Wheatsheaf index, described in Arbuckle et al. (2014) <doi: 10.1111/2041-210X.12195>, and some other unrelated but perhaps useful functions.

r-worrrd 0.1.0
Propagated dependencies: r-yaml@2.3.10 r-tibble@3.2.1 r-stringr@1.5.1 r-purrr@1.0.4 r-magrittr@2.0.3 r-glue@1.8.0 r-ggtext@0.1.2 r-ggplot2@3.5.2 r-ggfittext@0.10.2 r-dplyr@1.1.4 r-cowplot@1.1.3
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://www.stochastic-squirrel.com/worrrd/
Licenses: Expat
Synopsis: Generate Wordsearch and Crossword Puzzles
Description:

Generate wordsearch and crossword puzzles using custom lists of words (and clues). Make them easy or hard, and print them to solve offline with paper and pencil!

r-random 0.2.6
Propagated dependencies: r-curl@6.2.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.random.org
Licenses: GPL 2+
Synopsis: True random numbers using random.org
Description:

The true random number service provided by the random.org website created by Mads Haahr samples atmospheric noise via radio tuned to an unused broadcasting frequency together with a skew correction algorithm due to John von Neumann. More background is available in the included vignette based on an essay by Mads Haahr. In its current form, the package offers functions to retrieve random integers, randomized sequences and random strings.

r-rfacts 0.2.1
Dependencies: mono@6.12.0.206
Propagated dependencies: r-xml2@1.3.8 r-tibble@3.2.1 r-fs@1.6.6 r-digest@0.6.37
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://elilillyco.github.io/rfacts/
Licenses: Expat
Synopsis: R Interface to 'FACTS' on Unix-Like Systems
Description:

The rfacts package is an R interface to the Fixed and Adaptive Clinical Trial Simulator ('FACTS') on Unix-like systems. It programmatically invokes FACTS to run clinical trial simulations, and it aggregates simulation output data into tidy data frames. These capabilities provide end-to-end automation for large-scale simulation pipelines, and they enhance computational reproducibility. For more information on FACTS itself, please visit <https://www.berryconsultants.com/software/>.

r-rfpred 1.46.0
Propagated dependencies: r-rsamtools@2.24.0 r-iranges@2.42.0 r-genomicranges@1.60.0 r-genomeinfodb@1.44.0 r-data-table@1.17.4
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/rfPred
Licenses: FSDG-compatible
Synopsis: Assign rfPred functional prediction scores to a missense variants list
Description:

Based on external numerous data files where rfPred scores are pre-calculated on all genomic positions of the human exome, the package gives rfPred scores to missense variants identified by the chromosome, the position (hg19 version), the referent and alternative nucleotids and the uniprot identifier of the protein. Note that for using the package, the user has to download the TabixFile and index (approximately 3.3 Go).

r-rddapp 1.3.3
Propagated dependencies: r-sp@2.2-0 r-shiny@1.10.0 r-sandwich@3.1-1 r-r-utils@2.13.0 r-plot3d@1.4.1 r-lmtest@0.9-40 r-formula@1.2-5 r-dt@0.33 r-aer@1.2-14
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rddapp
Licenses: GPL 2+
Synopsis: Regression Discontinuity Design Application
Description:

Estimation of both single- and multiple-assignment Regression Discontinuity Designs (RDDs). Provides both parametric (global) and non-parametric (local) estimation choices for both sharp and fuzzy designs, along with power analysis and assumption checks. Introductions to the underlying logic and analysis of RDDs are in Thistlethwaite, D. L., Campbell, D. T. (1960) <doi:10.1037/h0044319> and Lee, D. S., Lemieux, T. (2010) <doi:10.1257/jel.48.2.281>.

r-cnvrd2 1.46.0
Propagated dependencies: r-variantannotation@1.54.1 r-rsamtools@2.24.0 r-rjags@4-17 r-iranges@2.42.0 r-gridextra@2.3 r-ggplot2@3.5.2 r-dnacopy@1.82.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://github.com/hoangtn/CNVrd2
Licenses: GPL 2
Synopsis: CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data
Description:

CNVrd2 uses next-generation sequencing data to measure human gene copy number for multiple samples, indentify SNPs tagging copy number variants and detect copy number polymorphic genomic regions.

r-abtest 1.0.1
Propagated dependencies: r-matrix@1.7-3 r-mvtnorm@1.3-3 r-plotrix@3.8-4 r-qgam@2.0.0 r-rcolorbrewer@1.1-3 r-rcpp@1.0.14 r-sn@2.1.1 r-truncnorm@1.0-9
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/abtest/
Licenses: GPL 2+
Synopsis: Bayesian A/B testing
Description:

This package provides functions for Bayesian A/B testing including prior elicitation options based on Kass and Vaidyanathan (1992) doi:10.1111/j.2517-6161.1992.tb01868.x.

r-unglue 0.1.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=unglue
Licenses: GPL 3
Synopsis: Extract matched substrings using a pattern
Description:

This package lets you use syntax inspired by the package glue to extract matched substrings in a more intuitive and compact way than by using standard regular expressions.

r-lmtest 0.9-40
Propagated dependencies: r-zoo@1.8-14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/lmtest
Licenses: GPL 2 GPL 3
Synopsis: Testing linear regression models
Description:

This package provides a collection of tests, data sets, and examples for diagnostic checking in linear regression models. Furthermore, some generic tools for inference in parametric models are provided.

r-hdrcde 3.4
Propagated dependencies: r-ash@1.0-15 r-ggplot2@3.5.2 r-kernsmooth@2.23-26 r-ks@1.15.1 r-locfit@1.5-9.12 r-rcolorbrewer@1.1-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://pkg.robjhyndman.com/hdrcde
Licenses: GPL 3
Synopsis: Highest density regions and conditional density estimation
Description:

This is a package for the computation of highest density regions in one and two dimensions, kernel estimation of univariate density functions conditional on one covariate, and multimodal regression.

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