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r-ragtop 1.2.0
Propagated dependencies: r-limsolve@1.5.7.2 r-futile-logger@1.4.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ragtop
Licenses: GPL 2+
Synopsis: Pricing Equity Derivatives with Extensions of Black-Scholes
Description:

Algorithms to price American and European equity options, convertible bonds and a variety of other financial derivatives. It uses an extension of the usual Black-Scholes model in which jump to default may occur at a probability specified by a power-law link between stock price and hazard rate as found in the paper by Takahashi, Kobayashi, and Nakagawa (2001) <doi:10.3905/jfi.2001.319302>. We use ideas and techniques from Andersen and Buffum (2002) <doi:10.2139/ssrn.355308> and Linetsky (2006) <doi:10.1111/j.1467-9965.2006.00271.x>.

r-r2html 2.3.4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/nalimilan/R2HTML
Licenses: GPL 2+
Synopsis: HTML export for R objects
Description:

This package includes HTML functions and methods to write in an HTML file. Thus, making HTML reports is easy. It includes a function that allows redirection on the fly, which appears to be very useful for teaching purposes, as the student can keep a copy of the produced output to keep all that they did during the course. The package comes with a vignette describing how to write HTML reports for statistical analysis. Finally, a driver for Sweave parses HTML flat files containing R code and to automatically write the corresponding outputs (tables and graphs).

r-altdoc 0.5.0
Propagated dependencies: r-quarto@1.4.4 r-fs@1.6.6 r-evaluate@1.0.3 r-desc@1.4.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://altdoc.etiennebacher.com
Licenses: Expat
Synopsis: Package Documentation Websites with 'Quarto', 'Docsify', 'Docute', or 'MkDocs'
Description:

This is a simple and powerful package to create, render, preview, and deploy documentation websites for R packages. It is a lightweight and flexible alternative to pkgdown', with support for many documentation generators, including Quarto', Docute', Docsify', and MkDocs'.

r-anacor 1.1-5
Propagated dependencies: r-fda@6.3.0 r-colorspace@2.1-1 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://r-forge.r-project.org/projects/psychor/
Licenses: GPL 2
Synopsis: Simple and Canonical Correspondence Analysis
Description:

This package performs simple and canonical CA (covariates on rows/columns) on a two-way frequency table (with missings) by means of SVD. Different scaling methods (standard, centroid, Benzecri, Goodman) as well as various plots including confidence ellipsoids are provided.

r-bc3net 1.0.5
Propagated dependencies: r-matrix@1.7-3 r-lattice@0.22-7 r-infotheo@1.2.0.1 r-igraph@2.1.4 r-c3net@1.1.1.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bc3net
Licenses: GPL 2+
Synopsis: Gene Regulatory Network Inference with Bc3net
Description:

Implementation of the BC3NET algorithm for gene regulatory network inference (de Matos Simoes and Frank Emmert-Streib, Bagging Statistical Network Inference from Large-Scale Gene Expression Data, PLoS ONE 7(3): e33624, <doi:10.1371/journal.pone.0033624>).

r-cornet 1.0.0
Propagated dependencies: r-palasso@1.0.0 r-glmnet@4.1-8
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/rauschenberger/cornet
Licenses: GPL 3
Synopsis: Penalised Regression for Dichotomised Outcomes
Description:

This package implements lasso and ridge regression for dichotomised outcomes (<doi:10.1080/02664763.2023.2233057>), i.e., numerical outcomes that were transformed to binary outcomes. Such artificial binary outcomes indicate whether an underlying measurement is greater than a threshold.

r-circle 0.7.3
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7 r-gh@1.5.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://docs.ropensci.org/circle/
Licenses: GPL 3
Synopsis: R Client Package for Circle CI
Description:

This package provides tools for interacting with the Circle CI API (<https://circleci.com/docs/api/v2/>). Besides executing common tasks such as querying build logs and restarting builds, this package also helps setting up permissions to deploy from builds.

r-do3pca 1.0.0
Propagated dependencies: r-rdimtools@1.1.2 r-ratematrix@1.2.4 r-phytools@2.4-4 r-nloptr@2.2.1 r-mclust@6.1.1 r-matrixcalc@1.0-6 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=do3PCA
Licenses: GPL 2+
Synopsis: Probabilistic Phylogenetic Principal Component Analysis
Description:

Estimates probabilistic phylogenetic Principal Component Analysis (PCA) and non-phylogenetic probabilistic PCA. Provides methods to implement alternative models of trait evolution including Brownian motion (BM), Ornstein-Uhlenbeck (OU), Early Burst (EB), and Pagel's lambda. Also provides flexible biplot functions.

r-dslabs 0.8.0
Propagated dependencies: r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dslabs
Licenses: Artistic License 2.0
Synopsis: Data Science Labs
Description:

Datasets and functions that can be used for data analysis practice, homework and projects in data science courses and workshops. 26 datasets are available for case studies in data visualization, statistical inference, modeling, linear regression, data wrangling and machine learning.

r-dlmrmv 1.0.0
Propagated dependencies: r-mass@7.3-65 r-glmnet@4.1-8
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DLMRMV
Licenses: ASL 2.0
Synopsis: Distributed Linear Regression Models with Response Missing Variables
Description:

As a distributed imputation strategy, the Distributed full information Multiple Imputation method is developed to impute missing response variables in distributed linear regression. The philosophy of the package is described in Guo (2025) <doi:10.1038/s41598-025-93333-6>.

r-detect 0.4-6
Propagated dependencies: r-pbapply@1.7-2 r-matrix@1.7-3 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/psolymos/detect
Licenses: GPL 2
Synopsis: Analyzing Wildlife Data with Detection Error
Description:

Models for analyzing site occupancy and count data models with detection error, including single-visit based models, conditional distance sampling and time-removal models. Package development was supported by the Alberta Biodiversity Monitoring Institute and the Boreal Avian Modelling Project.

r-eiopar 0.1.1
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7 r-curl@6.2.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=eiopaR
Licenses: Expat
Synopsis: Access to RFR (Risk-Free Rate) Curves Produced by the EIOPA
Description:

This package provides EIOPA (European Insurance And Occupational Pensions Authority) risk-free rates. Please note that the author of this package is not affiliated with EIOPA. The data is accessed through a REST API available at <https://mehdiechchelh.com/api/>.

r-forplo 0.2.5
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=forplo
Licenses: GPL 3
Synopsis: Flexible Forest Plots
Description:

Simplifies the creation and customization of forest plots (alternatively called dot-and-whisker plots). Input classes accepted by forplo are data.frame, matrix, lm, glm, and coxph. forplo was written in base R and does not depend on other packages.

r-feasts 0.4.1
Propagated dependencies: r-vctrs@0.6.5 r-tsibble@1.1.6 r-tidyr@1.3.1 r-tibble@3.2.1 r-slider@0.3.2 r-scales@1.4.0 r-rlang@1.1.6 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-gtable@0.3.6 r-ggplot2@3.5.2 r-fabletools@0.5.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: http://feasts.tidyverts.org/
Licenses: GPL 3
Synopsis: Feature Extraction and Statistics for Time Series
Description:

This package provides a collection of features, decomposition methods, statistical summaries and graphics functions for the analysing tidy time series data. The package name feasts is an acronym comprising of its key features: Feature Extraction And Statistics for Time Series.

r-gitgpt 0.1.3
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/stevecondylios/gitGPT
Licenses: Expat
Synopsis: Automated Git Commit Messages using the 'OpenAI' 'GPT' Model
Description:

Automates the process of adding, committing, and pushing changes to a git repository using commit messages generated by passing the git diff output to the OpenAI GPT-3.5 Turbo model (<https://platform.openai.com/docs/models/gpt-3>).

r-gosset 1.4
Propagated dependencies: r-tidyr@1.3.1 r-qvcalc@1.0.4 r-psychotools@0.7-4 r-plackettluce@0.4.3 r-patchwork@1.3.0 r-partykit@1.2-24 r-ggrepel@0.9.6 r-ggplot2@3.5.2 r-ggparty@1.0.0.1 r-desctools@0.99.60 r-bradleyterry2@1.1.3
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://agrdatasci.github.io/gosset/
Licenses: Expat
Synopsis: Tools for Data Analysis in Experimental Agriculture
Description:

This package provides methods to analyse experimental agriculture data, from data synthesis to model selection and visualisation. The package is named after W.S. Gosset aka â Studentâ , a pioneer of modern statistics in small sample experimental design and analysis.

r-ggpage 0.2.3
Propagated dependencies: r-tidytext@0.4.2 r-stringr@1.5.1 r-rlang@1.1.6 r-purrr@1.0.4 r-magrittr@2.0.3 r-ggplot2@3.5.2 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/EmilHvitfeldt/ggpage
Licenses: Expat
Synopsis: Creates Page Layout Visualizations
Description:

Facilitates the creation of page layout visualizations in which words are represented as rectangles with sizes relating to the length of the words. Which then is divided in lines and pages for easy overview of up to quite large texts.

r-goeveg 0.7.6
Propagated dependencies: r-vegan@2.6-10 r-mgcv@1.9-3 r-hmisc@5.2-3 r-fields@16.3.1
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://github.com/fvlampe/goeveg/
Licenses: GPL 2+
Synopsis: Functions for Community Data and Ordinations
Description:

This package provides a collection of functions useful in (vegetation) community analyses and ordinations. Includes automatic species selection for ordination diagrams, NMDS stress/scree plots, species response curves, merging of taxa as well as calculation and sorting of synoptic tables.

r-ifcnvr 0.1.0
Propagated dependencies: r-rmarkdown@2.29 r-isotree@0.6.1-4 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/SimCab-CHU/ifCNVR
Licenses: GPL 3
Synopsis: Isolation-Forest Based 'CNV' Detection from 'NGS' Data
Description:

Automatically detects Copy Number Variations (CNV) from Next Generation Sequencing data using a machine learning algorithm, Isolation forest. More details about the method can be found in the paper by Cabello-Aguilar (2022) <doi:10.1101/2022.01.03.474771>.

r-idingo 1.0.4
Propagated dependencies: r-visnetwork@2.1.2 r-scales@1.4.0 r-mvtnorm@1.3-3 r-igraph@2.1.4 r-glasso@1.11 r-ggmridge@1.5
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=iDINGO
Licenses: GPL 2
Synopsis: Integrative Differential Network Analysis in Genomics
Description:

Fits covariate dependent partial correlation matrices for integrative models to identify differential networks between two groups. The methods are described in Class et. al., (2018) <doi:10.1093/bioinformatics/btx750> and Ha et. al., (2015) <doi:10.1093/bioinformatics/btv406>.

r-jpgrid 0.4.0
Propagated dependencies: r-vctrs@0.6.5 r-units@0.8-7 r-tidyr@1.3.1 r-tidygraph@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-stars@0.6-8 r-sf@1.0-21 r-rlang@1.1.6 r-purrr@1.0.4 r-pillar@1.10.2 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/UchidaMizuki/jpgrid
Licenses: Expat
Synopsis: Functions for the Grid Square Codes in Japan
Description:

This package provides functions for grid square codes in Japan (<https://www.stat.go.jp/english/data/mesh/index.html>). Generates the grid square codes from longitude/latitude, geometries, and the grid square codes of different scales, and vice versa.

r-jmotif 1.1.1
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/jMotif/jmotif-R
Licenses: GPL 2
Synopsis: Time Series Analysis Toolkit Based on Symbolic Aggregate Discretization, i.e. SAX
Description:

This package implements time series z-normalization, SAX, HOT-SAX, VSM, SAX-VSM, RePair, and RRA algorithms facilitating time series motif (i.e., recurrent pattern), discord (i.e., anomaly), and characteristic pattern discovery along with interpretable time series classification.

r-jstree 1.2
Propagated dependencies: r-jsonlite@2.0.0 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/yonicd/jsTree
Licenses: Expat
Synopsis: Create Interactive Trees with the 'jQuery' 'jsTree' Plugin
Description:

Create and customize interactive trees using the jQuery jsTree <https://www.jstree.com/> plugin library and the htmlwidgets package. These trees can be used directly from the R console, from RStudio', in Shiny apps and R Markdown documents.

r-klassr 1.0.2
Propagated dependencies: r-tm@0.7-16 r-jsonlite@2.0.0 r-igraph@2.1.4 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://statisticsnorway.github.io/ssb-klassr/
Licenses: Expat
Synopsis: Classifications and Codelists for Statistics Norway
Description:

This package provides functions to search, retrieve, apply and update classifications and codelists using Statistics Norway's API <https://www.ssb.no/klass> from the system KLASS'. Retrieves classifications by date with options to choose language, hierarchical level and formatting.

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