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xgcm is a Python package for working with the datasets produced by numerical General Circulation Models (GCMs) and similar gridded datasets that are amenable to finite volume analysis. In these datasets, different variables are located at different positions with respect to a volume or area element (e.g. cell center, cell face, etc.) xgcm solves the problem of how to interpolate and difference these variables from one position to another.
This package provides a collection of (mostly) analytic functions in geophysics. We take an object oriented approach with the aim of having users be able to readily interact with the functions using Jupyter.
Provides a high-level interface to the ECWMF ECCODES C library for reading GRIB files. There are limited capabilities for writing GRIB files (you can modify the contents of an existing file, but you can't create one from scratch).
This package provides a Python wrapper for solid to compute solid Earth tides.
This package provides programmatic access to the data store catalogue of the Copernicus CDS.
pyKML is a Python package for creating, parsing, manipulating, and validating KML, a language for encoding and annotating geographic data.
PyGMT is a library for processing geospatial and geophysical data and making publication-quality maps and figures. It provides a Pythonic interface for the Generic Mapping Tools (GMT), a command-line program widely used across the Earth, Ocean, and Planetary sciences and beyond.
Pyresample is a python package for resampling geospatial image data. Resampling or reprojection is the process of mapping input geolocated data points to a new target geographic projection and area.
The electromagnetic modeller empymod can model electric or magnetic responses due to a three-dimensional electric or magnetic source in a layered-earth model with vertical transverse isotropic (VTI) resistivity, VTI electric permittivity, and VTI magnetic permeability, from very low frequencies (DC) to very high frequencies (GPR). The computation is carried out in the wavenumber-frequency domain, and various Hankel- and Fourier-transform methods are included to transform the responses into the space-frequency and space-time domains.
Boule is Python library for representing reference ellipsoids geometrically, calculating their gravity fields, and performing some global coordinate conversions.
This package provides DLF as used in Geophysics for electromagnetic modelling.
This package provides a geospatial extension for xarray powered by rasterio.
LoopStructural is an opensource Python library for 3D geological modelling. It can:
Model fault networks integrating fault kinematics and overprinting relationships;
Model folds using structural elements (fold axis, fold axial surface) for multiple fold events;
Use different implicit interpolation algorithms (Finite Difference, Piecewiese Linear, RBF);
Export models to vtk, geoh5, omf, gocad, csv, obj formats;
Visualise models in an interactive python environment.
This package provides methods for simulation and gradient-based parameter estimation in the context of geophysical applications.
The vision is to create a package for finite volume simulation with applications to geophysical imaging and subsurface flow. To enable the understanding of the many different components, this package has the following features:
modular with respect to the spacial discretization, optimization routine, and geophysical problem
built with the inverse problem in mind
provides a framework for geophysical and hydrogeologic problems
supports 1D, 2D and 3D problems
designed for large-scale inversions
Choclo is a Python library that hosts optimized kernel functions for running geophysical forward and inverse models, intended to be used by other libraries as the underlying layer of their computation.
Miami INsar Time-series software in PYthon.
This package estimates differential phase delay maps due to the stratified atmosphere for correcting radar interferograms.
This package provides a three-dimensional modeller for electromagnetic (EM) diffusion as used for instance in geophysical controlled-source EM (CSEM) surveys. This includes use cases in the search for resources such as groundwater, geothermal energy, hydrocarbons, and minerals, or civil engineering and environmental applications.
The Son of Grid Engine is a community project to continue Sun's old gridengine project after Oracle shut down the site and stopped contributing code.
This package an alternative qsub command that will directory run the script.
This package an alternative qsub command that will submit jobs to SLURM.
ADIOS2 transports data as groups of self-describing variables and attributes across different media types (such as files, wide-area-networks, and remote direct memory access) using a common application programming interface for all transport modes. ADIOS2 can be used on supercomputers, cloud systems, and personal computers.
IOR is a parallel IO benchmark that can be used to test the performance of parallel storage systems using various interfaces and access patterns. The IOR repository also includes the mdtest benchmark which specifically tests the peak metadata rates of storage systems under different directory structures. Both benchmarks use a common parallel I/O abstraction backend and rely on MPI for synchronization.
ViTE is a trace explorer. It is a tool to visualize execution traces of parallel programs (OpenMP, MPI, etc.) in Pajé or OTF format for debugging and profiling parallel or distributed applications. Such traces can be obtained using, for example, EZTrace.