This is a generic data receiver, mainly for decoding radio transmissions from devices on the 433 MHz, 868 MHz, 315 MHz, 345 MHz and 915 MHz ISM bands.

This is a package to perform the zFPKM transform on RNA-seq FPKM data. This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID 24215113).

Servr provides an HTTP server in R to serve static files, or dynamic documents that can be converted to HTML files (e.g., R Markdown) under a given directory.

This package provides syntax highlighting for R source code. Currently it supports LaTeX and HTML output. Source code of other languages is supported via Andre Simon's highlight package.

This package provides an R interface to HiGHS, an optimization solver. It is designed for solving mixed-integer optimization problems with quadratic or linear objectives and linear constraints.

Perform non-parametric analysis of response curves as described by Childs, Bach, Franken et al. (2019): Non-parametric analysis of thermal proteome profiles reveals novel drug-binding proteins.

Detection of ligand-protein interactions from 2D thermal profiles (DLPTP), Performs an FDR-controlled analysis of 2D-TPP experiments by functional analysis of dose-response curves across temperatures.

This package is devoted to analyzing MeRIP-seq data. Current functionalities include 1. detect transcriptome wide m6A methylation regions 2. detect transcriptome wide differential m6A methylation regions.

mpv is a general-purpose audio and video player. It is a fork of mplayer2 and MPlayer. It shares some features with the former projects while introducing many more.

Runitor runs the supplied command, captures its output, and based on its exit code reports successful or failed execution to https://healthchecks.io or your private instance.

ASICS quantifies concentration of metabolites in a complex spectrum. The identification of metabolites is performed by fitting a mixture model to the spectra of the library with a sparse penalty.

Milo performs single-cell differential abundance testing. Cell states are modelled as representative neighbourhoods on a nearest neighbour graph. Hypothesis testing is performed using a negative bionomial generalized linear model.

This package provides the ASCAT R package that can be used to infer tumour purity, ploidy and allele-specific copy number profiles.

How fast can you type R functions on your keyboard? Find out by running a zty.pe game: export R functions as instructions to type to destroy opponents' vessels.

This is a package for simplified document database access and manipulation, providing a common API across supported NoSQL databases Elasticsearch, CouchDB, MongoDB as well as SQLite/JSON1, PostgreSQL, and DuckDB.

This package provides two high quality and fast PPRNGs that may be used in an OpenMP parallel environment. In addition, there is a generator for one dimensional low-discrepancy sequence.

This package provides the header files for a stripped-down version of the plog header-only C++ logging library, and a method to log to R's standard error stream.

This package provides a basic set of R functions for querying the Cancer Genomics Data Server (CGDS), hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).

RolDE detects longitudinal differential expression between two conditions in noisy high-troughput data. Suitable even for data with a moderate amount of missing values.RolDE is a composite method, consisting of three independent modules with different approaches to detecting longitudinal differential expression. The combination of these diverse modules allows RolDE to robustly detect varying differences in longitudinal trends and expression levels in diverse data types and experimental settings.

This package provides tools to analyze and visualize high-throughput metabolomics data acquired using chromatography-mass spectrometry. These tools preprocess data in a way that enables reliable and powerful differential analysis.

This package provides users not only with a function to readily calculate the higher-order partial and semi-partial correlations but also with statistics and p-values of the correlation coefficients.

This package implements an opinionated framework for building a production- ready Shiny application. Golem contains a series of tools like dependency management, version management, easy installation and deployment or documentation management.

The Model-based Analysis of ChIP-Seq (MACS) is a widely used toolkit for identifying transcript factor binding sites. This package is an R wrapper of the lastest MACS3.

This package provides a hiredis wrapper that includes support for transactions, pipelining, blocking subscription, serialisation of all keys and values, Redis error handling with R errors. It includes an automatically generated R6 interface to the full hiredis API. Generated functions are faithful to the hiredis documentation while attempting to match R's argument semantics. Serialization must be explicitly done by the user, but both binary and text-mode serialisation is supported.