Makes documents containing plots and tables from a table of R codes. Can make "HTML", "pdf('LaTex')", "docx('MS Word')" and "pptx('MS Powerpoint')" documents with or without R code. In the package, modularized shiny app codes are provided. These modules are intended for reuse across applications.

Computes linear Bayesian spectral estimates from multirate data for second-order stationary time series. Provides credible intervals and methods for plotting various spectral estimates. Please see the paper `Should we sample a time series more frequently? (doi below) for a full description of and motivation for the methodology.

Designed to be compatible with the R package DBI (Database Interface) when connecting to Amazon Web Service ('AWS') Athena <https://aws.amazon.com/athena/>. To do this Python Boto3 Software Development Kit ('SDK') <https://boto3.amazonaws.com/v1/documentation/api/latest/index.html> is used as a driver.

R Interface to JDemetra+ 3.x (<https://github.com/jdemetra>) time series analysis software. It offers full access to options and outputs of X-13', including Reg-ARIMA modelling (automatic AutoRegressive Integrated Moving Average (ARIMA) model with outlier detection and trading days adjustment) and X-11 decomposition.

This package provides functions that are needed by many other packages on Bioconductor or which replace R functions.

This package provides a set of protein ID mappings for PFAM, assembled using data from public repositories.

This package provides tools for discriminative motif discovery in high throughput genetic sequencing data sets using regression methods.

This package provides tools for accurate calculations and visualization of precision-recall and ROC (Receiver Operator Characteristics) curves.

A treemap is a space-filling visualization of hierarchical structures. This package offers great flexibility to draw treemaps.

This package provides a set of tools for displaying, modeling and analysing multivariate abundance data in community ecology.

Rhythmbox is a music playing application for GNOME. It supports playlists, song ratings, and any codecs installed through gstreamer.

GRPC is a high performance, open-source universal RPC framework. This package provides a ruby interface for it.

This package provides useful utilities from Seminar fuer Statistik ETH Zurich, including many that are related to graphics.

The `miaTime` package provides tools for microbiome time series analysis based on (Tree)SummarizedExperiment infrastructure.

Whole-exome sequencing data from a murine small-cell lung tumor; only contains data of chromosome 4.

This package provides methods for the binarization and trinarization of one-dimensional data and some visualization functions.

Incorporates colour gradients from the cpt-city web archive available at <http://seaviewsensing.com/pub/cpt-city/>.

Create cumulative odds ratio plot to visually inspect the proportional odds assumption from the proportional odds model.

Collection of utility functions for visualizing body map data collected with the Collaborative Health Outcomes Information Registry.

This package provides functions for reading DCP and CDF.bin files generated by the dChip software.

Generate balanced factorial designs with crossed and nested random and fixed effects <https://github.com/mmrabe/designr>.

Create a details HTML tag around R objects to place in a Markdown, Rmarkdown and roxygen2 documentation.

Create and manage fault-tolerant task queues for the foreach package using the Redis key/value database.

Calculates several indices, such as of diversity, fluctuation, etc., and they are used to estimate ecological indicators.