This package provides a set of tools for statistical relative protein significance analysis in DDA, SRM and DIA experiments.

Base annotation databases for pig, intended ONLY to be used by AnnotationDbi to produce regular annotation packages.

This package provides a replication of key functionality from dplyr and the wider tidyverse using only base.

This package provides basic infrastructure for linear test statistics and permutation inference in the framework of Strasser and Weber (1999).

This package provides datasets to accompany J. Fox and S. Weisberg, An R Companion to Applied Regression, Third Edition, Sage.

Monitor a hardware random number generator, and supply entropy from that to the system kernel's /dev/random machinery.

CBOR is a library for the CBOR format, based on Sadayuki Furuhashi's MessagePack library.

Yell is a comprehensive logging replacement for Ruby. It defines multiple adapters, various log level combinations and message formatting options.

This package provides a simple and flexible way to generate Circos 2D track plot images. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics packages that comes with the base installation.

Interface to access data via the United States Department of Agriculture's National Agricultural Statistical Service (NASS) Quick Stats web API <https://quickstats.nass.usda.gov/api/>. Convenience functions facilitate building queries based on available parameters and valid parameter values. This product uses the NASS API but is not endorsed or certified by NASS.

This package provides functions for phylogenetic analysis (Castiglione et al., 2018 <doi:10.1111/2041-210X.12954>). The functions perform the estimation of phenotypic evolutionary rates, identification of phenotypic evolutionary rate shifts, quantification of direction and size of evolutionary change in multivariate traits, the computation of ontogenetic shape vectors and test for morphological convergence.

Encapsulates functions to streamline calls from R to the REDCap API. REDCap (Research Electronic Data CAPture) is a web application for building and managing online surveys and databases developed at Vanderbilt University. The Application Programming Interface (API) offers an avenue to access and modify data programmatically, improving the capacity for literate and reproducible programming.

Various functions for querying and reshaping dependency trees, as for instance created with the spacyr or udpipe packages. This enables the automatic extraction of useful semantic relations from texts, such as quotes (who said what) and clauses (who did what). Method proposed in Van Atteveldt et al. (2017) <doi:10.1017/pan.2016.12>.

Optimizing methods for liquid chromatography coupled to mass spectrometry (LC-MS) poses a nontrivial challenge. The rawDiag package facilitates rational method optimization by generating MS operator-tailored diagnostic plots of scan-level metadata. The package is designed for use on the R shell or as a Shiny application on the Orbitrap instrument PC.

Make Bootstrap 4 Shiny dashboards. Use the full power of AdminLTE3, a dashboard template built on top of Bootstrap 4.

Collect your data on digital marketing campaigns from Adform Ads using the Windsor.ai API <https://windsor.ai/api-fields/>.

Business days calculations based on a list of holidays and nonworking weekdays. Quite useful for fixed income and derivatives pricing.

Solves control systems problems relating to time/frequency response, LTI systems design and analysis, transfer function manipulations, and system conversion.

Computes dynamical correlation estimates and percentile bootstrap confidence intervals for pairs of longitudinal responses, including consideration of lags and derivatives.

Similar to base's unique function, only optimized for working with data frames, especially those that contain date-time columns.

Interface to Palantir Foundry', including reading and writing structured or unstructured datasets, and more <https://www.palantir.com/platforms/foundry/>.

Integer programming models to assign students to groups by maximising diversity within groups, or by maximising preference scores for topics.

Bindings to the libgraphqlparser C++ library. Parses GraphQL <https://graphql.org> syntax and exports the AST in JSON format.

This package provides a suite of functions to ping URLs and to time HTTP requests'. Designed to work with httr'.