This package provides an R interface to the RCSB Protein Data Bank ('PDB') Search and Data APIs (<https://www.rcsb.org/>). Supports full-text, attribute, sequence, motif, structure, and chemical searches; retrieval of entry-, assembly-, polymer-entity-, and chemical-component-level metadata; and conversion of API responses into analysis-ready tables and typed R objects for reproducible structural bioinformatics workflows.

This package implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

seqLogo takes the position weight matrix of a DNA sequence motif and plots the corresponding sequence logo as introduced by Schneider and Stephens (1990).

This package provides a collection of artificial and real-world machine learning benchmark problems, including, e.g., several data sets from the UCI repository.

This package computes moments of univariate truncated T distribution. There is only one exported function, e_trunct, which should be seen for details.

This package provides new statistics, new geometries and new positions for ggplot2 and a suite of functions to facilitate the creation of statistical plots.

This package lets you fit a variety of Bayesian latent variable models, including confirmatory factor analysis, structural equation models, and latent growth curve models.

This package provides functions to extract commonly used fragmentation metrics to quantify time accumulation strategies based on minute level actigraphy-measured activity counts data.

This package provides a way to access the System Management Unit for certain AMD Ryzen processors. This includes access to the System Management Network.

Tilt is a thin interface over a number of different Ruby template engines in an attempt to make their usage as generic as possible.

This package provides a box compatible custom language parser for the languageserver package to provide completion and signature hints in code editors.

Bandwidth selectors for local linear quantile regression, including cross-validation and plug-in methods. The local linear quantile regression estimate is also implemented.

Computation of bootstrap confidence intervals in an almost automatic fashion as described in Efron and Narasimhan (2020, <doi:10.1080/10618600.2020.1714633>).

This package provides tools that allow developers to write functions for cross-validation with minimal programming effort and assist users with model selection.

Interface to the Google Cloud Machine Learning Platform <https://cloud.google.com/vertex-ai>, which provides cloud tools for training machine learning models.

This package contains the function used to create the Dandelion Plot. Dandelion Plot is a visualization method for R-mode Exploratory Factor Analysis.

This package provides programmatic access to the Dark Sky API <https://darksky.net/dev/docs>, which provides current or historical global weather conditions.

Derivative-Free optimization algorithms. These algorithms do not require gradient information. More importantly, they can be used to solve non-smooth optimization problems.

The complete scripts from the American sitcom Friends in tibble format. Use this package to practice data wrangling, text analysis and network analysis.

Build display tables easily by extending the functionality of the flextable package. Features include spanning header, grouping rows, parsing markdown and so on.

Fits models to catch and effort data. Single-species models are 1) delta log-normal, 2) Tweedie, or 3) Poisson-gamma (G)LMs.

Generating fractional binomial random variables and computing density, cumulative distribution, and quantiles of fractional binomial distributions. (Lee, J. (2023) <arXiv:2209.01516>.).

This package provides a suite of custom R Markdown formats and templates for authoring web pages styled with the GOV.UK Design System.

This is a wrapper for the command line tool googler', which can be found at the following URL: <https://github.com/jarun/googler>.