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r-hctrial 0.1.0
Propagated dependencies: r-genbinomapps@1.2.1 r-clinfun@1.1.5
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=hctrial
Licenses: GPL 2 GPL 3
Synopsis: Using Historical Controls for Designing Phase II Clinical Trials
Description:

This package provides functions for designing phase II clinical trials adjusting for the heterogeneity of the population using known subgroups or historical controls.

r-imdbapi 0.1.0
Propagated dependencies: r-stringr@1.5.1 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=imdbapi
Licenses: GPL 3
Synopsis: Get Movie, Television Data from the 'imdb' Database
Description:

This package provides API access to the <http://imdbapi.net> which maintains metadata about movies, games and television shows through a public API.

r-jcvrisk 0.1.2
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://cran.r-project.org/package=Jcvrisk
Licenses: Expat
Synopsis: Risk Calculator for Cardiovascular Disease in Japan
Description:

This package provides a calculation tool to obtain the 10-year risk of cardiovascular disease from various risk models (Hisayama, Suita, EPOCH Japan).

r-kseaapp 0.99.0
Propagated dependencies: r-gplots@3.2.0
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://cran.r-project.org/package=KSEAapp
Licenses: Expat
Synopsis: Kinase-Substrate Enrichment Analysis
Description:

This package infers relative kinase activity from phosphoproteomics data using the method described by Casado et al. (2013) <doi:10.1126/scisignal.2003573>.

r-ltpdvar 1.2.1
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=LTPDvar
Licenses: GPL 2
Synopsis: LTPD and AOQL Plans for Acceptance Sampling Inspection by Variables
Description:

Calculation of rectifying LTPD and AOQL plans for sampling inspection by variables which minimize mean inspection cost per lot of process average quality.

r-lehuynh 0.1.1
Propagated dependencies: r-usethis@3.1.0 r-tibble@3.2.1 r-stringr@1.5.1 r-rio@1.2.3 r-readxl@1.4.5 r-purrr@1.0.4 r-magrittr@2.0.3 r-ggpubr@0.6.0 r-ggplot2@3.5.2 r-fs@1.6.6 r-dplyr@1.1.4 r-brms@2.22.0
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://github.com/le-huynh/lehuynh
Licenses: Expat
Synopsis: Le-Huynh Truc-Ly's R Code and Templates
Description:

Miscellaneous R functions (for graphics, data import, data transformation, and general utilities) and templates (for exploratory analysis, Bayesian modeling, and crafting scientific manuscripts).

r-marquee 1.0.0
Propagated dependencies: r-vctrs@0.6.5 r-textshaping@1.0.1 r-systemfonts@1.2.3 r-rlang@1.1.6 r-png@0.1-8 r-jpeg@0.1-11 r-glue@1.8.0 r-cpp11@0.5.2 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://marquee.r-lib.org
Licenses: Expat
Synopsis: Markdown Parser and Renderer for R Graphics
Description:

This package provides the mean to parse and render markdown text with grid along with facilities to define the styling of the text.

r-survsnp 0.26
Dependencies: gsl@2.8
Propagated dependencies: r-xtable@1.8-4 r-survival@3.8-3 r-rcpp@1.0.14 r-lattice@0.22-7 r-foreach@1.5.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=survSNP
Licenses: GPL 3
Synopsis: Power Calculations for SNP Studies with Censored Outcomes
Description:

Conduct asymptotic and empirical power and sample size calculations for Single-Nucleotide Polymorphism (SNP) association studies with right censored time to event outcomes.

r-sciplot 1.2-0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sciplot
Licenses: GPL 2+
Synopsis: Scientific Graphing Functions for Factorial Designs
Description:

This package provides a collection of functions that creates graphs with error bars for data collected from one-way or higher factorial designs.

r-seqmade 1.0
Propagated dependencies: r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SeqMADE
Licenses: GPL 2+
Synopsis: Network Module-Based Model in the Differential Expression Analysis for RNA-Seq
Description:

This package provides a network module-based generalized linear model for differential expression analysis with the count-based sequence data from RNA-Seq.

r-tugboat 0.1.1
Propagated dependencies: r-renv@1.1.4 r-here@1.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://www.dmolitor.com/tugboat/
Licenses: GPL 3+
Synopsis: Build a Docker Image from a Directory or Project
Description:

Simple utilities to generate a Dockerfile from a directory or project, build the corresponding Docker image, and push the image to DockerHub.

r-tidypmc 2.0
Propagated dependencies: r-xml2@1.3.8 r-tokenizers@0.3.0 r-tibble@3.2.1 r-stringr@1.5.1 r-readr@2.1.5 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/ropensci/tidypmc
Licenses: GPL 3
Synopsis: Parse Full Text XML Documents from PubMed Central
Description:

Parse XML documents from the Open Access subset of Europe PubMed Central <https://europepmc.org> including section paragraphs, tables, captions and references.

r-vasicek 0.0.3
Propagated dependencies: r-mvtnorm@1.3-3
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/statcompute/vasicek
Licenses: GPL 2+
Synopsis: Miscellaneous Functions for Vasicek Distribution
Description:

Provide a collection of miscellaneous R functions related to the Vasicek distribution with the intent to make the lives of risk modelers easier.

r-wordmap 0.9.2
Propagated dependencies: r-stringi@1.8.7 r-quanteda@4.2.0 r-matrix@1.7-3 r-ggrepel@0.9.6 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://github.com/koheiw/wordmap
Licenses: Expat
Synopsis: Feature Extraction and Document Classification with Noisy Labels
Description:

Extract features and classify documents with noisy labels given by document-meta data or keyword matching Watanabe & Zhou (2020) <doi:10.1177/0894439320907027>.

r-msmseda 1.46.0
Propagated dependencies: r-gplots@3.2.0 r-mass@7.3-65 r-msnbase@2.34.0 r-rcolorbrewer@1.1-3
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/msmsEDA
Licenses: GPL 2
Synopsis: Exploratory data analysis of LC-MS/MS data by spectral counts
Description:

Exploratory data analysis to assess the quality of a set of LC-MS/MS experiments, and visualize de influence of the involved factors.

r-pizzarr 0.1.0-1.7b3fd72
Propagated dependencies: r-jsonlite@2.0.0 r-memoise@2.0.1 r-qs@0.27.3 r-r6@2.6.1 r-stringr@1.5.1
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/keller-mark/pizzarr
Licenses: Expat
Synopsis: Slice into Zarr arrays in R
Description:

This package provides an implementation of chunked, compressed, N-dimensional arrays for R, Zarr specification version 2 (2024) <doi:10.5281/zenodo.11320255>.

ribotaper 1.3.1
Dependencies: bash-minimal@5.1.16 bedtools@2.18.0 samtools@0.1.19 r-minimal@4.5.0 r-foreach@1.5.2 r-xnomial@1.0.4.1 r-domc@1.3.8 r-multitaper@1.0-17 r-seqinr@4.2-36
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://ohlerlab.mdc-berlin.de/software/RiboTaper_126/
Licenses: GPL 3+
Synopsis: Define translated ORFs using ribosome profiling data
Description:

Ribotaper is a method for defining translated open reading frames (ORFs) using ribosome profiling (ribo-seq) data. This package provides the Ribotaper pipeline.

r-capushe 1.1.2
Propagated dependencies: r-mass@7.3-65
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/capushe/index.html
Licenses: GPL 2+
Synopsis: Calibrating penalties using slope heuristics
Description:

This package provides tools for the calibration of penalized criteria for model selection. The calibration methods available are based on the slope heuristics.

r-modeest 2.4.0
Propagated dependencies: r-fbasics@4041.97 r-stable@1.1.6 r-stabledist@0.7-2 r-statip@0.2.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/paulponcet/modeest
Licenses: GPL 3
Synopsis: Mode estimations for univariate data or distributions
Description:

The package provides estimators of the mode of univariate unimodal (and sometimes multimodal) data and values of the modes of usual probability distributions.

r-isoband 0.2.7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/wilkelab/isoband
Licenses: Expat
Synopsis: Generate isolines and isobands from regularly spaced elevation grids
Description:

This package provides a fast C++ implementation to generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.

rust-p521 0.13.3
Channel: guix
Location: gnu/packages/crates-crypto.scm (gnu packages crates-crypto)
Home page: https://github.com/RustCrypto/elliptic-curves/tree/master/p521
Licenses: ASL 2.0 Expat
Synopsis: Pure Rust implementation of the NIST P-521 (a.k.a. secp521r1) elliptic curve
Description:

This package provides Pure Rust implementation of the NIST P-521 (a.k.a. secp521r1) elliptic curve as defined in SP 800-186.

rust-conv 0.3.3
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/DanielKeep/rust-conv
Licenses: Expat
Synopsis: Conversion traits with more specific semantics
Description:

This crate provides a number of conversion traits with more specific semantics than those provided by as or From/Into.

r-rpyants 0.0.4
Propagated dependencies: r-rpymat@0.1.7 r-rnifti@1.8.0 r-reticulate@1.42.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://dipterix.org/rpyANTs/
Licenses: ASL 2.0
Synopsis: An Alternative Advanced Normalization Tools ('ANTs')
Description:

This package provides portable access from R to biomedical image processing toolbox ANTs by Avants et al. (2009) <doi:10.54294/uvnhin> via seamless integration with the Python implementation ANTsPy'. Allows biomedical images to be processed in Python and analyzed in R', and vice versa via shared memory. See citation("rpyANTs") for more reference information.

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