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r-pursuit 1.0.9
Propagated dependencies: r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=Pursuit
Licenses: GPL 3
Build system: r
Synopsis: Projection Pursuit
Description:

Projection pursuit (PP) with 17 methods and grand tour with 3 methods. Being that projection pursuit searches for low-dimensional linear projections in high-dimensional data structures, while grand tour is a technique used to explore multivariate statistical data through animation.

r-pyramid 1.5
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: http://minato.sip21c.org/swtips/Rgraphics.html#PYRAMID
Licenses: GPL 2+
Build system: r
Synopsis: Draw Population Pyramid
Description:

Drawing population pyramid using (1) data.frame or (2) vectors. The former is named as pyramid() and the latter pyramids(), as wrapper function of pyramid(). pyramidf() is the function to draw population pyramid within the specified frame.

r-surelda 0.1.0-1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-proc@1.19.0.1 r-matrix@1.7-4 r-map@1.0.0 r-glmnet@4.1-10 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/celehs/sureLDA
Licenses: GPL 3
Build system: r
Synopsis: Novel Multi-Disease Automated Phenotyping Method for the EHR
Description:

This package provides a statistical learning method to simultaneously predict a range of target phenotypes using codified and natural language processing (NLP)-derived Electronic Health Record (EHR) data. See Ahuja et al (2020) JAMIA <doi:10.1093/jamia/ocaa079> for details.

r-survsim 1.1.8
Propagated dependencies: r-statmod@1.5.1 r-eha@2.11.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=survsim
Licenses: GPL 2+
Build system: r
Synopsis: Simulation of Simple and Complex Survival Data
Description:

Simulation of simple and complex survival data including recurrent and multiple events and competing risks. See Moriña D, Navarro A. (2014) <doi:10.18637/jss.v059.i02> and Moriña D, Navarro A. (2017) <doi:10.1080/03610918.2016.1175621>.

r-scornet 0.1.1
Propagated dependencies: r-survival@3.8-3 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-pracma@2.4.6 r-matrix@1.7-4 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/celehs/SCORNET
Licenses: GPL 3
Build system: r
Synopsis: Semi-Supervised Calibration of Risk with Noisy Event Times
Description:

This package provides a consistent, semi-supervised, non-parametric survival curve estimator optimized for efficient use of Electronic Health Record (EHR) data with a limited number of current status labels. See van der Laan and Robins (1997) <doi:10.2307/2670119>.

r-scraper 0.1.8
Propagated dependencies: r-stringr@1.6.0 r-rvest@1.0.5 r-magrittr@2.0.4 r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=scrapeR
Licenses: Expat
Build system: r
Synopsis: These Functions Fetch and Extract Text Content from Specified Web Pages
Description:

The scrapeR package utilizes functions that fetch and extract text content from specified web pages. It handles HTTP errors and parses HTML efficiently. The package can handle hundreds of websites at a time using the scrapeR_in_batches() command.

r-srcpkgs 0.2
Propagated dependencies: r-testthat@3.3.0 r-pkgload@1.4.1 r-devtools@2.4.6 r-clitable@0.1.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/kforner/srcpkgs
Licenses: GPL 3+
Build system: r
Synopsis: R Source Packages Manager
Description:

Manage a collection/library of R source packages. Discover, document, load, test source packages. Enable to use those packages as if they were actually installed. Quickly reload only what is needed on source code change. Run tests and checks in parallel.

r-tsibble 1.2.0
Propagated dependencies: r-vctrs@0.6.5 r-tidyselect@1.2.1 r-tibble@3.3.0 r-rlang@1.1.6 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-generics@0.1.4 r-dplyr@1.1.4 r-anytime@0.3.12
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://tsibble.tidyverts.org
Licenses: GPL 3
Build system: r
Synopsis: Tidy Temporal Data Frames and Tools
Description:

This package provides a tbl_ts class (the tsibble') for temporal data in an data- and model-oriented format. The tsibble provides tools to easily manipulate and analyse temporal data, such as filling in time gaps and aggregating over calendar periods.

r-trendtm 2.0.21
Propagated dependencies: r-softimpute@1.4-3 r-fda@6.3.0 r-capushe@1.1.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TrendTM
Licenses: GPL 3
Build system: r
Synopsis: Trend of High-Dimensional Time Series Matrix Estimation
Description:

Matrix factorization for multivariate time series with both low rank and temporal structures. The procedure is the one proposed by Alquier, P. and Marie, N. "Matrix factorization for multivariate time series analysis." Electronic Journal of Statistics, 13(2), 4346-4366 (2019).

r-topchef 0.2.0
Propagated dependencies: r-tidyr@1.3.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/celevitz/topChef
Licenses: Expat
Build system: r
Synopsis: Top Chef Data
Description:

Several datasets which describe the chef contestants in Top Chef, the challenges that they compete in, and the results of those challenges. This data is useful for practicing data wrangling, graphing, and analyzing how each season of Top Chef played out.

r-inspect 1.40.0
Propagated dependencies: r-biobase@2.70.0 r-biocgenerics@0.56.0 r-biocparallel@1.44.0 r-deseq2@1.50.2 r-desolve@1.40 r-genomicalignments@1.46.0 r-genomicfeatures@1.62.0 r-genomicranges@1.62.0 r-iranges@2.44.0 r-kernsmooth@2.23-26 r-plgem@1.82.0 r-proc@1.19.0.1 r-readxl@1.4.5 r-rootsolve@1.8.2.4 r-rsamtools@2.26.0 r-rtracklayer@1.70.0 r-s4vectors@0.48.0 r-seqinfo@1.0.0 r-shiny@1.11.1 r-summarizedexperiment@1.40.0 r-txdb-mmusculus-ucsc-mm9-knowngene@3.2.2
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/INSPEcT
Licenses: GPL 2
Build system: r
Synopsis: Analysis of 4sU-seq and RNA-seq time-course data
Description:

INSPEcT (INference of Synthesis, Processing and dEgradation rates in Time-Course experiments) analyses 4sU-seq and RNA-seq time-course data in order to evaluate synthesis, processing and degradation rates and assess via modeling the rates that determines changes in mature mRNA levels.

r-ggforce 0.5.0
Propagated dependencies: r-cli@3.6.5 r-cpp11@0.5.2 r-ggplot2@4.0.1 r-gtable@0.3.6 r-lifecycle@1.0.4 r-mass@7.3-65 r-polyclip@1.10-7 r-rlang@1.1.6 r-scales@1.4.0 r-systemfonts@1.3.1 r-tidyselect@1.2.1 r-tweenr@2.0.3 r-vctrs@0.6.5 r-withr@3.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://ggforce.data-imaginist.com
Licenses: Expat
Build system: r
Synopsis: Accelerating ggplot2
Description:

The aim of the ggplot2 package is to aid in visual data investigations. This focus has led to a lack of facilities for composing specialized plots. This package aims to be a collection of mainly new statistics and geometries that fills this gap.

r-tinytex 0.58
Propagated dependencies: r-xfun@0.54
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/yihui/tinytex
Licenses: Expat
Build system: r
Synopsis: Helper functions for TeX Live and compiling LaTeX documents
Description:

This package provides helper functions to install and maintain the LaTeX distribution named TinyTeX, a lightweight, cross-platform, portable, and easy-to-maintain version of TeX Live. This package also contains helper functions to compile LaTeX documents, and install missing LaTeX packages automatically.

r-nor1mix 1.3-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/nor1mix/
Licenses: GPL 2+
Build system: r
Synopsis: Normal (1-d) mixture models
Description:

This package provides S3 classes and methods for one-dimensional normal mixture models, for, e.g., density estimation or clustering algorithms research and teaching; it provides the widely used Marron-Wand densities. It also provides tools for efficient random number generation and graphics.

r-getpass 0.2-4
Propagated dependencies: r-rstudioapi@0.17.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/wrathematics/getPass
Licenses: FreeBSD
Build system: r
Synopsis: Masked user input
Description:

This package provides a micro-package for reading "passwords", i.e. reading user input with masking, so that the input is not displayed as it is typed. Currently, RStudio, the command line (every OS), and any platform where tcltk is present are supported.

ruby-thin 1.7.2
Propagated dependencies: ruby-daemons@1.2.5 ruby-eventmachine@1.2.7 ruby-rack@2.2.7
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/macournoyer/thin
Licenses: Ruby License
Build system: ruby
Synopsis: Thin and fast web server for Ruby
Description:

Thin is a Ruby web server that glues together 3 Ruby libraries:

  • the Mongrel parser,

  • Event Machine, a network I/O library with high scalability, performance and stability,

  • Rack, a minimal interface between webservers and Ruby frameworks.

ristretto 0.13.3
Dependencies: gtk+@3.24.51 libexif@0.6.24 libxfce4ui@4.20.0 tumbler@4.20.0
Channel: guix
Location: gnu/packages/xfce.scm (gnu packages xfce)
Home page: https://docs.xfce.org/apps/ristretto/start
Licenses: GPL 2+
Build system: gnu
Synopsis: Fast and lightweight picture-viewer
Description:

The Ristretto Image Viewer is an application that can be used to view, and scroll through images. It can be used to run a slideshow of images, open images with other applications like an image-editor or configure an image as the desktop wallpaper.

r-diffhic 1.42.0
Propagated dependencies: r-summarizedexperiment@1.40.0 r-s4vectors@0.48.0 r-rtracklayer@1.70.0 r-rsamtools@2.26.0 r-rhtslib@3.6.0 r-rhdf5@2.54.0 r-rcpp@1.1.0 r-locfit@1.5-9.12 r-limma@3.66.0 r-iranges@2.44.0 r-interactionset@1.38.0 r-genomicranges@1.62.0 r-genomeinfodb@1.46.0 r-edger@4.8.0 r-csaw@1.44.0 r-bsgenome@1.78.0 r-biostrings@2.78.0 r-biocgenerics@0.56.0
Channel: guix-bioc
Location: guix-bioc/packages/d.scm (guix-bioc packages d)
Home page: https://bioconductor.org/packages/diffHic
Licenses: GPL 3
Build system: r
Synopsis: Differential Analysis of Hi-C Data
Description:

Detects differential interactions across biological conditions in a Hi-C experiment. Methods are provided for read alignment and data pre-processing into interaction counts. Statistical analysis is based on edgeR and supports normalization and filtering. Several visualization options are also available.

r-mariner 1.10.2
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://ericscottdavis.com/mariner/
Licenses: Expat
Build system: r
Synopsis: Mariner: Explore the Hi-Cs
Description:

This package provides tools for manipulating paired ranges and working with Hi-C data in R. Functionality includes manipulating/merging paired regions, generating paired ranges, extracting/aggregating interactions from `.hic` files, and visualizing the results. Designed for compatibility with plotgardener for visualization.

r-semdist 1.44.0
Propagated dependencies: r-go-db@3.22.0 r-annotationdbi@1.72.0 r-annotate@1.88.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: http://github.com/iangonzalez/SemDist
Licenses: GPL 2+
Build system: r
Synopsis: Information Accretion-based Function Predictor Evaluation
Description:

This package implements methods to calculate information accretion for a given version of the gene ontology and uses this data to calculate remaining uncertainty, misinformation, and semantic similarity for given sets of predicted annotations and true annotations from a protein function predictor.

r-bigmice 1.0.0
Propagated dependencies: r-tidyselect@1.2.1 r-sparklyr@1.9.3 r-rlang@1.1.6 r-matrix@1.7-4 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bigMICE
Licenses: GPL 2+
Build system: r
Synopsis: Multiple Imputation of Big Data
Description:

This package provides a computational toolbox designed for handling missing values in large datasets with the Multiple Imputation by Chained Equations (MICE) by using Apache Spark'. The methodology is described in Morvan et al. (2026) <doi:10.48550/arXiv.2601.21613>.

r-boltzmm 0.1.5
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BoltzMM
Licenses: GPL 3
Build system: r
Synopsis: Boltzmann Machines with MM Algorithms
Description:

This package provides probability computation, data generation, and model estimation for fully-visible Boltzmann machines. It follows the methods described in Nguyen and Wood (2016a) <doi:10.1162/NECO_a_00813> and Nguyen and Wood (2016b) <doi:10.1109/TNNLS.2015.2425898>.

r-dynatop 0.2.4
Propagated dependencies: r-zoo@1.8-14 r-xts@0.14.1 r-rcpp@1.1.0 r-r6@2.6.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://waternumbers.github.io/dynatop/
Licenses: GPL 2
Build system: r
Synopsis: An Implementation of Dynamic TOPMODEL Hydrological Model in R
Description:

An R implementation and enhancement of the Dynamic TOPMODEL semi-distributed hydrological model originally proposed by Beven and Freer (2001) <doi:10.1002/hyp.252>. The dynatop package implements code for simulating models which can be created using the dynatopGIS package.

r-despair 0.1.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/jpmonteagudo28/despair
Licenses: GPL 3+
Build system: r
Synopsis: Motivational Quotes and Shakespearean Bard–bits for Personal Projects
Description:

Generate motivational quotes and Shakespearean word combinations (bardâ bits) that a user can consider for their personal projects. Each of the package functions takes two arguments, cat which default to any, and a a numeric or character seed to ensure reproducible results.

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